New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 76896 =1458 (0.790)234 (0.140) 116/224 16.5 15.6% intergenic (‑145/+40) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
?CP016816 = 76892 1223 (0.740)intergenic (‑141/+44) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1674 total aligned reads displayed.

TTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATCTTTACT  >  CP016816/76769‑77023
                                                                                                                                 |                                                                                                                               
  atatatatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACtttttt                                                                                                                               >  1:1004602/1‑128 (MQ=255)
    atatatTTTTTAAATTAAGGTTGTATAATTAAAATTAATAATAACTGTACAAACCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAATAAAAATATTAAAAAtttttttt                                                                                                                             <  2:1705617/128‑1 (MQ=255)
      atatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACtttttttttt                                                                                                                           >  2:1033688/1‑128 (MQ=255)
       tatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAGGATAAATTTTTTAAAGAAAAATATTACAACttttttttttt                                                                                                                          >  1:1351851/1‑128 (MQ=255)
       tatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACttttttttttt                                                                                                                          >  1:3228581/1‑128 (MQ=255)
        atTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACtttttttttttt                                                                                                                         >  2:1553379/1‑128 (MQ=255)
        atTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAAAATTACAACttttgatttttt                                                                                                                         >  1:2592317/1‑128 (MQ=255)
         ttAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACttttttttttttt                                                                                                                        >  2:2768138/1‑128 (MQ=255)
          tAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACtttttttttttttt                                                                                                                       >  1:2940968/1‑128 (MQ=255)
              gAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACtttttttattttttatta                                                                                                                   >  2:1210685/1‑124 (MQ=255)
                 atttattttttataATAAAAATTTAAAAAAAATTTAAAACCCAAAATTCCCTTTAAAATAAAATAAAAATATAAAAAAATAAATTTTTTAAATAAAAATATTAAAAATTTTTTTTTTTTTTTGGAACt                                                                                                               <  2:3314425/118‑1 (MQ=255)
                   tAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACtttttttttttttttttaaaaaa                                                                                                              >  1:968718/1‑121 (MQ=255)
                   tAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTGGAACTaa                                                                                                             >  2:3818964/1‑128 (MQ=255)
                    aaGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACttttttttttttttgtaaataaaa                                                                                                             >  1:3997047/1‑118 (MQ=255)
                     aGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATATATTTTTTAAAGAAAAATATTACAACtttttttttttttttgaaaatacat                                                                                                            >  2:2520882/1‑118 (MQ=255)
                     aGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACttttttttttttttttttaaataaa                                                                                                            >  1:744880/1‑119 (MQ=255)
                        aTGTTTAATACAAATTAATAATAACTTTACAACCCAAATTCCCCTTTAAATTAAAATAACATTATATAAAGATAAATTTTTTAAATAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTGGAACTAACAtata                                                                                                       <  2:1821637/128‑1 (MQ=255)
                        aTGTATAATAAAAATTAATAATAACTGTAAAAACCAAAATACCATTTAAATTAAAATAAAATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTGGAACTAACATATaa                                                                                                      <  2:3194139/128‑1 (MQ=255)
                         tGTATAATAAAAATTAAATATAAATGTTCATACAAAATTACTCTTTTAATTAAAATTAAATTAAATAAATTTAATTTTTTTAATTAAAAATATTACAATTTTTTTTTTTTTTTTTGGAACTAACatat                                                                                                        <  2:3696639/128‑1 (MQ=255)
                          ttataATTAAAATTAATAATAATTGTACAACACAAATTACCATTTAAATTAATATAAATTTATATAAATATAAATTTTTTAAATAAAAATATTACAAC‑‑TTTTTTTTTTTTTTGGAACTAACATATAAt                                                                                                     <  2:2610789/127‑1 (MQ=255)
                           tctaataCAAAATACTAAAAAAAGTTAAAACCAAAAAACCCTTTTAAATAAAATAAAATTATATAAAGATAAATTTTTTAAATAAAAAAATTACAAC‑‑ATTTTTTTTTTTTTGGAACTAACATATAAtt                                                                                                    <  1:1688068/126‑1 (MQ=255)
                           tataATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTTAAACTAAAATATaaa                                                                                                     >  1:2322946/1‑127 (MQ=255)
                           tataATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTT‑‑GAACTAACATATAAtt                                                                                                    >  2:3955867/1‑128 (MQ=255)
                                 aCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTT‑‑GAACTAACATATAATTTTAcaa                                                                                              >  1:1258659/1‑126 (MQ=255)
                                  cAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTGTAACTAAAATATAATTTTaaaa                                                                                              >  2:3264615/1‑125 (MQ=255)
                                   aaaTTAAAAAAAACTGTACAAAACAAAATTCCATTTAAATTAAAATTAAATTATATAAATATAAAATTTTTAAATAAAAAAAATAAAACTTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCa                                                                                              <  1:146273/128‑1 (MQ=255)
                                    aaatattaataaCTTTAAAAACAAAAATACCATTTAAATTAAAATAAAATTATATAAATATAAATTTTTTAAATAAAAATATTAAAACTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAat                                                                                            <  1:2170685/122‑1 (MQ=255)
                                     aTTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTGGAAATAACATTTAATTTTACAAatt                                                                                           >  2:1886807/1‑128 (MQ=255)
                                          taataaATGTAAAAACAAAATTTCTTTTTAAATTAAATTAATATTTAATTAATTTATTTTTTTTAAAGAATAATATTACAAC‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGa                                                                                     <  2:3392029/128‑1 (MQ=255)
                                          aaataaATTTAAAAACCAAATTCCCCTTTAAATTCAAATAAAATTATATAAAGATAAATTTTTTAAATAAAAATATTACAAC‑‑ATTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGa                                                                                     <  1:155972/127‑1 (MQ=255)
                                            ataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTGGAAATAACATATAATTTTACCAAtttttatat                                                                                    >  2:1769352/1‑125 (MQ=255)
                                             taaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTGTAACTAACATATAATTTTACAAATTATTAGaat                                                                                   >  1:2483232/1‑128 (MQ=255)
                                             taaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaat                                                                                   >  1:3836654/1‑128 (MQ=255)
                                             taaCTGTAAAACCCAAATTCACCTTTAAATTAAAATAACATTATATAAAGATAAATTTTTTAAATAAAAATATTAAAACTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaat                                                                                   <  1:2815273/128‑1 (MQ=255)
                                              aaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTTGGAACTAAAAAAAAATTTTACCAATTAATAAaat                                                                                   >  2:847998/1‑128 (MQ=255)
                                              aaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTTGAACATAAATAAAAATTTTACAAATAATTAAaat                                                                                   >  1:3340428/1‑128 (MQ=255)
                                              aaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTTGAAATAAAATAAAATTTTAACAATTATTTAaatt                                                                                  >  1:469217/1‑128 (MQ=255)
                                                 tGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTT‑‑GAACTAACATATAATTTTACCAATTTTTAAaatttcaa                                                                              >  2:1401034/1‑128 (MQ=255)
                                                   taaaaaacAAATTACCCTTTAAAATAAAATAACATTATATAAATATAAAATTTTTAAATAAAAATATTACAACTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttcaat                                                                             <  1:1872841/121‑1 (MQ=255)
                                                   taaaaCCAAAATTACCCATTAAATTAAAATAACAATATATAAATATAAAATTTTTAAATAAAAATATTAAAACTTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttcaa                                                                              <  1:897631/125‑1 (MQ=255)
                                                    aCAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTGGAAATAAAAAATAATTATACAAATTAATATatttacaatt                                                                            >  2:1473276/1‑128 (MQ=255)
                                                          cAAATTCCCCTTTAAATTCAAATAACATTATATTAAGATAAATTTTTTAAAGAAAAATATTTCAACTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAg                                                                      <  1:376335/128‑1 (MQ=255)
                                                           caaatCCCCTTTAAATACAAAATACATTAAATAAACATAAATTTTTTAAATAAAAAAATAACAACTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGa                                                                     <  2:359862/124‑1 (MQ=255)
                                                            aaatacccTTTAAATTCAAAAAACATTATATAAAGATAAATTTTTTAAATAAAAATATTACAAATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGAt                                                                    <  1:266510/123‑1 (MQ=255)
                                                            aaTTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTTGAAATAAAATAAAATTTTAAAAAATATTAGAATTTAAATTTAACAGAt                                                                    >  1:1923887/1‑128 (MQ=255)
                                                            aaTTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTT‑‑GAAAAAAAATATAATTTTACAAATTATTATaatttcaatttaaaatata                                                                   >  2:2235045/1‑120 (MQ=255)
                                                            aaTTCCACATTAAATTCAAATAAAAATATATAAATATAAATTTTTTAAATAAAAATATTACAACTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGAt                                                                    <  1:3082190/128‑1 (MQ=255)
                                                            aaTTACCCTTTAAATTCAAATAAAATTATTTAAAGATAAATTTTTTAAACAAAAATATTAAAAATATTTTTTTTTTTTTGTAAATAACATATAATTTTACCAATTATTAGaatttcaattcatctgtg                                                                    <  1:2890380/128‑9 (MQ=255)
                                                             aataacaattAAAATAAAATAAAATTATAAAAATTTAAATTTTTTAAATAAAAAATTTAAAAATTTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGa                                                                     <  2:3096866/120‑1 (MQ=255)
                                                              ttCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTGGAACTAACATAAAAATTTACCAATAATTAAaatttcaattaaaaatatca                                                                  >  2:2336187/1‑118 (MQ=255)
                                                              attaacTTTAAATTAAAAAAAAATTTTATAAATTTTAATTTTTTAAATTAAAATATTAAAAATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGa                                                                  <  2:1273836/123‑1 (MQ=255)
                                                                aaaaataaaaTTAAAATAAAATTATAATAATTAAAATTTTTTAAATATAAAAATTAAAAATTTTTTTTTTTTTTTGGAACTAAAATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAAt                                                                <  1:2756358/121‑1 (MQ=255)
                                                                   cTTTAAATTTAAATAAAATTATATAAATATAAATTTTTTTAATTAAATTTATTTAAAATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGa                                                             <  2:2077449/128‑1 (MQ=255)
                                                                   cTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTGTAAAAAAAAATATATTTTTAAAAATTTTTATATTTTAAATTTAAAAAATAAAtttt                                                             >  2:2422406/1‑126 (MQ=255)
                                                                      tAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTTTATTTTCATTTTAAAAGTTGAATTGAt                                                            >  1:1296971/1‑128 (MQ=255)
                                                                      tAAAATTAAATTAAATTTTATTAATATAAATTTTTTAAATAAAAATATTAAAAATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAttt                                                          <  1:2246194/128‑1 (MQ=255)
                                                                       aaaTTATAATTAAATTTTATAAATATATATTTTTTAAATAAAAAAATTAAAAATTTTTTTTTTTTTTTGTAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                         <  1:1761797/128‑1 (MQ=255)
                                                                        aattaaaattaaATTTTATAAATATTAATTTTTTAAATAAAAATAATAAAACTTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                         <  1:847998/128‑1 (MQ=255)
                                                                         aTTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTGTAACTAACATATAATTTTACCAATTTTTAAAATTTAAATTTCACAGATGAATTGAtttagt                                                       >  2:293701/1‑125 (MQ=255)
                                                                         aTTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTGGAACTAACATATAATTTTACAAATTATTAGAATTTCAATTTAAAATATGAATTGATTTCTTCta                                                    >  1:3714800/1‑128 (MQ=255)
                                                                           taaaaataCATTAATTAAATTTAAATTTTTTAAATTAAAATATTTAAAATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCta                                                    <  2:460262/121‑1 (MQ=255)
                                                                            cAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTGGAAATAACATATAATTTTACCAATTATTAGAATTTCAATTTAACAGATGAATTGTTTTCTTCta                                                    >  1:1619331/1‑128 (MQ=255)
                                                                             aaattaaattATATAAACTAAAATTTTTTAAAGTAAAAAATTAAAATTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCtaa                                                   <  2:623279/128‑1 (MQ=255)
                                                                                taaaaatataaaAATATAAATTTTTTTAATTAAAATAATATAAATTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCtaata                                                 <  2:92906/122‑1 (MQ=255)
                                                                                      tatataAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTTGTAACAAACATAAAATTTTACAAATTATTAGAATTAAAATTTAACAAATTAATTTATTTATTATAAAAAttttt                                           >  2:1134948/1‑126 (MQ=255)
                                                                                       atttaAATATTAAATTTTTAAATAAAAAAATTTAAAATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCt                                         <  2:2671011/125‑1 (MQ=255)
                                                                                       atataAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACAAATTATTAGAATTTAAATTTAACAGATTATTTTATTTCTTCAAATAATTTGTCt                                         >  1:3608405/1‑128 (MQ=255)
                                                                                        tataAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTGTAACTAAAATATAATTTTACAAATTATTATAATTTCAATTTAACAGATGAATTGATTTCTTATAATAATTTGtata                                        >  1:355093/1‑128 (MQ=255)
                                                                                        tataAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTGGAAATAACAAATATTTTTACCAATTTTTATAATTTCAATTTCACATATGATTTTATTAATAATAATAATTTTTCttatt                                     >  2:2839466/1‑124 (MQ=255)
                                                                                         ataattttAAATTTTTTAATAAAAATTATTAAAATTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtat                                       <  1:3917623/121‑1 (MQ=255)
                                                                                         ataAAATTAAATTTTTTAAATAAAAATATTAAAAATTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCta                                        <  2:216298/128‑1 (MQ=255)
                                                                                           aaaTATAAATTTTTTAAATAAAAATATTAAAAATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtatat                                     <  1:3477501/128‑1 (MQ=255)
                                                                                            aaGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTGGAACTAACAAATAATTTTACCATATATTAGAATTTCAAAATAACAGATAAATTTATTTCTTATAATAATTTTTCtataaac                                   >  2:694278/1‑125 (MQ=255)
                                                                                              tttAAATTTTTTAAAGAAAAATATTTAAAATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGa                                  <  1:2297280/126‑1 (MQ=255)
                                                                                              taTAATTTTTTTAAATAAAAATATTAAAATTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGa                                  <  2:2006615/127‑1 (MQ=255)
                                                                                               aTAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTGGAACTAACATATATTTTTACAAATTATTAGAATTTCAATTTCACAGATGATTTGATTTCTTCTAATAATTTGTCTATATAGAt                                 >  2:1328665/1‑128 (MQ=255)
                                                                                               aTAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTGGAAATAAAATATAATTATACAAATTATTAGAATTTAAATTACAAATATAAATATATTTAATATAATAATTTTTATatatatat                                 >  1:3395303/1‑128 (MQ=255)
                                                                                                 aaaTTTTTTTAATAAAAAATTTTAATATTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATg                                <  1:1063560/128‑1 (MQ=255)
                                                                                                      ttttAAATAAAAATATTTAAAATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGtttttt                          <  1:1164203/128‑1 (MQ=255)
                                                                                                       tttAAAGAAAAATATTACAACTTTTTTTTTTTTTTT‑‑GAAATAAAATATAATTTTACAAATTATTAGAATTTAAATTTCACAGATGAATTTATTTCTTATAATAATTTGTATATATATATGTTTTTtat                        >  1:180933/1‑128 (MQ=255)
                                                                                                        tttatattaaaaTAATAAAAATTTTATTTTTTTTTTTGGAACTAACATATAATTTTACCATTTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGtttttt                          <  2:3877140/120‑1 (MQ=255)
                                                                                                        ttAAATATAAATAATAAAAATTTTTTTTTTTTTTTGGAAATAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTtat                        <  2:555742/128‑1 (MQ=255)
                                                                                                        ttAAATAAAAATTTTAAAAATTTTTTTTTTTTTTTTTGAACTAAAATATAATTTTAACAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTta                         <  1:2400694/128‑1 (MQ=255)
                                                                                                        ttAAAGAAAAATATTACAACTTTTTTTTTTTTTTTGAAAAAAACATATAATTTTAACAATTATTAAAATTTAAATTTCAAAAATGAATTAATTTATTCTAAAAATTTTTAAATATAAATATATTTtaa                        >  2:1935705/1‑127 (MQ=255)
                                                                                                        ttAAAGAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTGCAACTAACAAATAATTTAACAAATTATTAGAATTTCAATTTCCAAAATGAATTTATTAATTATAATAATTTGAATATAAAAATTTATTTTatata                     >  2:40207/1‑127 (MQ=255)
                                                                                                         tAAAGAAAAATATTACAACTTTTTTTTTTTTTTTGGAACTAAAATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATAAATTGATTTATTCTAATAATTTTTGTATATATATTTTTTTtata                       >  2:3455825/1‑128 (MQ=255)
                                                                                                          aaaTAAAAATTTTAAAAATTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTtata                       <  1:315541/128‑1 (MQ=255)
                                                                                                          aaaGAAAAATATTACAACTTTTTTTTTTTTTTTGGAACTAAAATAAAATTTTACCAATTATAATAATTAAAATTTAACATATGATTTTATTTATTCTAAAAATTTTAAAAAATAAATGTTTTTtataa                      >  2:3025165/1‑127 (MQ=255)
                                                                                                            aataaaaaTATTAAAACTCTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTatat                      <  1:2021249/125‑1 (MQ=255)
                                                                                                             ataaaaaTTTTACAAATTTTTTTTTTTTTTTGGAAGTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCt                    <  1:2106889/126‑1 (MQ=255)
                                                                                                                 aaaTATTACAACTTTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTATAATTTAAATTTCACAGATGAATTTATTTCTTATAAAAATTTGTCTATATATTTGTTTTTTATATATaa                  >  2:3524496/1‑128 (MQ=255)
                                                                                                                  aaTATTTCAAATTTTTTTTTTTTTTTTGGAACTAAAATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAAt                <  2:1637272/128‑1 (MQ=255)
                                                                                                                   atatTACAACTTTTTTTTTTTTTTTTGAAATAAAATAAAATTTTACAAATTTTTATAATTTAAATTTAAAAATTGAATTTATTTCTTATAATAATTTTTAAATATTTATTTTTTTTATATATAAAtaa              >  1:60606/1‑126 (MQ=255)
                                                                                                                    tatTACAACTTTTTTTTTTTTTTTGGACCAAAAATATAATTTTACAAATTATTAAAATTTCAATTTCACAGATTATTTGTTTTCTTATAATATTTTTTATATATTTATGTTTTTTATaaataaataat             >  1:3269577/1‑125 (MQ=255)
                                                                                                                    tatTACAACTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAg             <  1:435315/128‑1 (MQ=255)
                                                                                                                           aaaatttttatttttttttGTAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATc        <  2:770636/124‑1 (MQ=255)
                                                                                                                            aactttttttttttttttGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCAAATATGAATTGATTTATTCTAATAATTTGTATATATAGATTTTTTTTATATGTAAATAAGTGATct       >  2:375809/4‑128 (MQ=255)
                                                                                                                               tttttttttttttttGGAACTAATATATAATTTTAACAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATcttta    <  1:659033/128‑1 (MQ=255)
                                                                                                                               tttttttttttttttGGAAATAACATATAATTTTACCAATTATTAGAATTTCAATTTCAAAGATGAATTGATTTATTCTAATAATTTTTAAATATAGATTTTTTTTATATAAAAATCAGTTATattta    >  1:3002654/1‑128 (MQ=255)
                                                                                                                                ttttttttttttttGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTACACAGATGTATTTATTTATTCTAATAATTTTTCTATATATATGTTTTTTATATCTAAAGCAGTGATcttta  >  2:2292502/1‑127 (MQ=255)
                                                                                                                                 |                                                                                                                               
TTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATCTTTACT  >  CP016816/76769‑77023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.