New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 76896 =1458 (0.790)234 (0.140) 116/224 16.5 15.6% intergenic (‑145/+40) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
?CP016816 = 76892 1223 (0.740)intergenic (‑141/+44) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1674 total aligned reads displayed.

TTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATCTTTACT  >  CP016816/76769‑77023
                                                                                                                                 |                                                                                                                               
  atatatatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑tttttt                                                                                                                               >  1:1004602/1‑128 (MQ=255)
    atatatTTTTTAAATTAAGGTTGTATAATTAAAATTAATAATAACTGTACAAACCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑TAAAAATATTAAAAA‑tttttttt                                                                                                                             <  2:1705617/128‑1 (MQ=255)
      atatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑tttttttttt                                                                                                                           >  2:1033688/1‑128 (MQ=255)
       tatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAGGATAAATTTTTTAAA‑GAAAAATATTACAAC‑ttttttttttt                                                                                                                          >  1:1351851/1‑128 (MQ=255)
       tatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑ttttttttttt                                                                                                                          >  1:3228581/1‑128 (MQ=255)
        atTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑tttttttttttt                                                                                                                         >  2:1553379/1‑128 (MQ=255)
        atTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAAAATTACAAC‑ttttgatttttt                                                                                                                         >  1:2592317/1‑128 (MQ=255)
         ttAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑ttttttttttttt                                                                                                                        >  2:2768138/1‑128 (MQ=255)
          tAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑tttttttttttttt                                                                                                                       >  1:2940968/1‑128 (MQ=255)
              gAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑tttttttattttttatta                                                                                                                   >  2:1210685/1‑124 (MQ=255)
                 atttattttttataATAAAAATTTAAAAAAAATTTAAAACCCAAAATTCCCTTTAAAATAAAATAAAAATATAAAAAAATAAATTTTTTAAA‑TAAAAATATTA‑AAA‑ATTTTTTTTTTTTTTTGGAACt                                                                                                               <  2:3314425/118‑1 (MQ=255)
                   tAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑tttttttttttttttttaaaaaa                                                                                                              >  1:968718/1‑121 (MQ=255)
                   tAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTaa                                                                                                             >  2:3818964/1‑128 (MQ=255)
                    aaGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑ttttttttttttttgtaaataaaa                                                                                                             >  1:3997047/1‑118 (MQ=255)
                     aGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATATATTTTTTAAA‑GAAAAATATTACAAC‑tttttttttttttttgaaaatacat                                                                                                            >  2:2520882/1‑118 (MQ=255)
                     aGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑ttttttttttttttttttaaataaa                                                                                                            >  1:744880/1‑119 (MQ=255)
                        aTGTTTAATACAAATTAATAATAACTTTACAACCCAAATTCCCCTTTAAATTAAAATAACATTATATAAAGATAAATTTTTTAAA‑TAAAAATATTAAAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACAtata                                                                                                       <  2:1821637/128‑1 (MQ=255)
                        aTGTATAATAAAAATTAATAATAACTGTAAAAACCAAAATACCATTTAAATTAAAATAAAATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTGGAACTAACATATaa                                                                                                      <  2:3194139/128‑1 (MQ=255)
                         tGTATAATAAAAATTAAATATAAATGTTCATACAAAATTACTCTTTTAATTAAAATTAAATTAAATAAATTTAATTTTTTTAAT‑TAAAAATATTACAAT‑TTTTTTTTTTTTTTTTGGAACTAACatat                                                                                                        <  2:3696639/128‑1 (MQ=255)
                          ttataATTAAAATTAATAATAATTGTACAACACAAATTACCATTTAAATTAATATAAATTTATATAAATATAAATTTTTTAAA‑TAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAAt                                                                                                     <  2:2610789/127‑1 (MQ=255)
                           tctaataCAAAATACTAAAAAAAGTTAAAACCAAAAAACCCTTTTAAATAAAATAAAATTATATAAAGATAAATTTTTTAAA‑TAAAAAAATTACAAC‑‑‑ATTTTTTTTTTTTTGGAACTAACATATAAtt                                                                                                    <  1:1688068/126‑1 (MQ=255)
                           tataATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑TTTTTTTTTTTTTTTT‑AAACTAAAATATaaa                                                                                                     >  1:2322946/1‑127 (MQ=255)
                           tataATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑TTTTTTTTTTTTTTT‑‑GAACTAACATATAAtt                                                                                                    >  2:3955867/1‑128 (MQ=255)
                                 aCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑TTTTTTTTTTTTTTT‑‑GAACTAACATATAATTTTAcaa                                                                                              >  1:1258659/1‑126 (MQ=255)
                                  cAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGTAACTAAAATATAATTTTaaaa                                                                                              >  2:3264615/1‑125 (MQ=255)
                                   aaaTTAAAAAAAACTGTACAAAACAAAATTCCATTTAAATTAAAATTAAATTATATAAATATAAAATTTTTAAA‑TAAAAAAAATAAAAC‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCa                                                                                              <  1:146273/128‑1 (MQ=255)
                                    aaatattaataaCTTTAAAAACAAAAATACCATTTAAATTAAAATAAAATTATATAAATATAAATTTTTTAAA‑TAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAat                                                                                            <  1:2170685/122‑1 (MQ=255)
                                     aTTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAAATAACATTTAATTTTACAAatt                                                                                           >  2:1886807/1‑128 (MQ=255)
                                          taataaATGTAAAAACAAAATTTCTTTTTAAATTAAATTAATATTTAATTAATTTATTTTTTTTAAA‑GAATAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGa                                                                                     <  2:3392029/128‑1 (MQ=255)
                                          aaataaATTTAAAAACCAAATTCCCCTTTAAATTCAAATAAAATTATATAAAGATAAATTTTTTAAA‑TAAAAATATTACAAC‑‑‑ATTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGa                                                                                     <  1:155972/127‑1 (MQ=255)
                                            ataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAAATAACATATAATTTTACCAAtttttatat                                                                                    >  2:1769352/1‑125 (MQ=255)
                                             taaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGTAACTAACATATAATTTTACAAATTATTAGaat                                                                                   >  1:2483232/1‑128 (MQ=255)
                                             taaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaat                                                                                   >  1:3836654/1‑128 (MQ=255)
                                             taaCTGTAAAACCCAAATTCACCTTTAAATTAAAATAACATTATATAAAGATAAATTTTTTAAA‑TAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaat                                                                                   <  1:2815273/128‑1 (MQ=255)
                                              aaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGGAACTAAAAAAAAATTTTACCAATTAATAAaat                                                                                   >  2:847998/1‑128 (MQ=255)
                                              aaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGAACATAAATAAAAATTTTACAAATAATTAAaat                                                                                   >  1:3340428/1‑128 (MQ=255)
                                              aaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑TTTTTTTTTTTTTTTT‑GAAATAAAATAAAATTTTAACAATTATTTAaatt                                                                                  >  1:469217/1‑128 (MQ=255)
                                                 tGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑TTTTTTTTTTTTTTT‑‑GAACTAACATATAATTTTACCAATTTTTAAaatttcaa                                                                              >  2:1401034/1‑128 (MQ=255)
                                                   taaaaaacAAATTACCCTTTAAAATAAAATAACATTATATAAATATAAAATTTTTAAA‑TAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttcaat                                                                             <  1:1872841/121‑1 (MQ=255)
                                                   taaaaCCAAAATTACCCATTAAATTAAAATAACAATATATAAATATAAAATTTTTAAA‑TAAAAATATTAAAAC‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttcaa                                                                              <  1:897631/125‑1 (MQ=255)
                                                    aCAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAAATAAAAAATAATTATACAAATTAATATatttacaatt                                                                            >  2:1473276/1‑128 (MQ=255)
                                                          cAAATTCCCCTTTAAATTCAAATAACATTATATTAAGATAAATTTTTTAAA‑GAAAAATATTTCAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAg                                                                      <  1:376335/128‑1 (MQ=255)
                                                           caaatCCCCTTTAAATACAAAATACATTAAATAAACATAAATTTTTTAAA‑TAAAAAAATAACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGa                                                                     <  2:359862/124‑1 (MQ=255)
                                                            aaatacccTTTAAATTCAAAAAACATTATATAAAGATAAATTTTTTAAA‑TAAAAATATTACAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGAt                                                                    <  1:266510/123‑1 (MQ=255)
                                                            aaTTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑TTTTTTTTTTTTTTTT‑GAAATAAAATAAAATTTTAAAAAATATTAGAATTTAAATTTAACAGAt                                                                    >  1:1923887/1‑128 (MQ=255)
                                                            aaTTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑TTTTTTTTTTTTTTT‑‑GAAAAAAAATATAATTTTACAAATTATTATaatttcaatttaaaatata                                                                   >  2:2235045/1‑120 (MQ=255)
                                                            aaTTCCACATTAAATTCAAATAAAAATATATAAATATAAATTTTTTAAA‑TAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGAt                                                                    <  1:3082190/128‑1 (MQ=255)
                                                            aaTTACCCTTTAAATTCAAATAAAATTATTTAAAGATAAATTTTTTAAA‑CAAAAATATTA‑AAA‑ATATTTTTTTTTTTTTGTAAATAACATATAATTTTACCAATTATTAGaatttcaattcatctgtg                                                                    <  1:2890380/128‑9 (MQ=255)
                                                             aataacaattAAAATAAAATAAAATTATAAAAATTTAAATTTTTTAAATAAAAAATTTAAAAAT‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGa                                                                     <  2:3096866/120‑1 (MQ=255)
                                                              ttCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATAAAAATTTACCAATAATTAAaatttcaattaaaaatatca                                                                  >  2:2336187/1‑118 (MQ=255)
                                                              attaacTTTAAATTAAAAAAAAATTTTATAAATTTTAATTTTTTAAA‑TTAAAATATTA‑AAA‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGa                                                                  <  2:1273836/123‑1 (MQ=255)
                                                                aaaaataaaaTTAAAATAAAATTATAATAATTAAAATTTTTTAAA‑TATAAAAATTA‑AAA‑ATTTTTTTTTTTTTTTGGAACTAAAATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAAt                                                                <  1:2756358/121‑1 (MQ=255)
                                                                   cTTTAAATTTAAATAAAATTATATAAATATAAATTTTTTTAA‑TTAAATTTATTTAA‑‑AATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGa                                                             <  2:2077449/128‑1 (MQ=255)
                                                                   cTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑TTTTTTTTTTTTTTGT‑AAAAAAAAATATATTTTTAAAAATTTTTATATTTTAAATTTAAAAAATAAAtttt                                                             >  2:2422406/1‑126 (MQ=255)
                                                                      tAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAACTTTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTTTATTTTCATTTTAAAAGTTGAATTGAt                                                            >  1:1296971/1‑128 (MQ=255)
                                                                      tAAAATTAAATTAAATTTTATTAATATAAATTTTTTAAA‑TAAAAATATTA‑AAA‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAttt                                                          <  1:2246194/128‑1 (MQ=255)
                                                                       aaaTTATAATTAAATTTTATAAATATATATTTTTTAAA‑TAAAAAAATTA‑AAA‑ATTTTTTTTTTTTTTTGTAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                         <  1:1761797/128‑1 (MQ=255)
                                                                        aattaaaattaaATTTTATAAATATTAATTTTTTAAA‑TAAAAATAATAAAAC‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                         <  1:847998/128‑1 (MQ=255)
                                                                         aTTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGTAACTAACATATAATTTTACCAATTTTTAAAATTTAAATTTCACAGATGAATTGAtttagt                                                       >  2:293701/1‑125 (MQ=255)
                                                                         aTTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑‑‑‑‑TTTTTTTTTTTTGGAACTAACATATAATTTTACAAATTATTAGAATTTCAATTTAAAATATGAATTGATTTCTTCta                                                    >  1:3714800/1‑128 (MQ=255)
                                                                           taaaaataCATTAATTAAATTTAAATTTTTTAAA‑TTAAAATATTTAAA‑‑‑ATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCta                                                    <  2:460262/121‑1 (MQ=255)
                                                                            cAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAAATAACATATAATTTTACCAATTATTAGAATTTCAATTTAACAGATGAATTGTTTTCTTCta                                                    >  1:1619331/1‑128 (MQ=255)
                                                                             aaattaaattATATAAACTAAAATTTTTTAAA‑GTAAAAAATTA‑AAA‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCtaa                                                   <  2:623279/128‑1 (MQ=255)
                                                                                taaaaatataaaAATATAAATTTTTTTAA‑TTAAAATAATATAAA‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCtaata                                                 <  2:92906/122‑1 (MQ=255)
                                                                                      tatataAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGTAACAAACATAAAATTTTACAAATTATTAGAATTAAAATTTAACAAATTAATTTATTTATTATAAAAAttttt                                           >  2:1134948/1‑126 (MQ=255)
                                                                                       atttaAATATTAAATTTTTAAA‑TAAAAAAATT‑TAAA‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCt                                         <  2:2671011/125‑1 (MQ=255)
                                                                                       atataAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACAAATTATTAGAATTTAAATTTAACAGATTATTTTATTTCTTCAAATAATTTGTCt                                         >  1:3608405/1‑128 (MQ=255)
                                                                                        tataAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGTAACTAAAATATAATTTTACAAATTATTATAATTTCAATTTAACAGATGAATTGATTTCTTATAATAATTTGtata                                        >  1:355093/1‑128 (MQ=255)
                                                                                        tataAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑‑‑‑‑TTTTTTTTTTTTGGAAATAACAAATATTTTTACCAATTTTTATAATTTCAATTTCACATATGATTTTATTAATAATAATAATTTTTCttatt                                     >  2:2839466/1‑124 (MQ=255)
                                                                                         ataattttAAATTTTTTAAT‑AAAAATTATTA‑AAA‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtat                                       <  1:3917623/121‑1 (MQ=255)
                                                                                         ataAAATTAAATTTTTTAAA‑TAAAAATATTAAAAA‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCta                                        <  2:216298/128‑1 (MQ=255)
                                                                                           aaaTATAAATTTTTTAAA‑TAAAAATATTA‑AAA‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtatat                                     <  1:3477501/128‑1 (MQ=255)
                                                                                            aaGATAAATTTTTTAAA‑GAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACAAATAATTTTACCATATATTAGAATTTCAAAATAACAGATAAATTTATTTCTTATAATAATTTTTCtataaac                                   >  2:694278/1‑125 (MQ=255)
                                                                                              tttAAATTTTTTAAA‑GAAAAATATT‑TAAA‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGa                                  <  1:2297280/126‑1 (MQ=255)
                                                                                              taTAATTTTTTTAAA‑TAAAAATATTA‑AAA‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGa                                  <  2:2006615/127‑1 (MQ=255)
                                                                                               aTAAATTTTTTAAA‑GAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATATTTTTACAAATTATTAGAATTTCAATTTCACAGATGATTTGATTTCTTCTAATAATTTGTCTATATAGAt                                 >  2:1328665/1‑128 (MQ=255)
                                                                                               aTAAATTTTTTAAA‑GAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAAATAAAATATAATTATACAAATTATTAGAATTTAAATTACAAATATAAATATATTTAATATAATAATTTTTATatatatat                                 >  1:3395303/1‑128 (MQ=255)
                                                                                                 aaaTTTTTTTAA‑TAAAAAATTTTAATA‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATg                                <  1:1063560/128‑1 (MQ=255)
                                                                                                      ttttAAA‑TAAAAATATT‑TAAA‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGtttttt                          <  1:1164203/128‑1 (MQ=255)
                                                                                                       tttAAA‑GAAAAATATTACAAC‑TTTTTTTTTTTTTTT‑‑GAAATAAAATATAATTTTACAAATTATTAGAATTTAAATTTCACAGATGAATTTATTTCTTATAATAATTTGTATATATATATGTTTTTtat                        >  1:180933/1‑128 (MQ=255)
                                                                                                        tttatattaaaaTAATAAAAA‑TTTTATTTTTTTTTTTGGAACTAACATATAATTTTACCATTTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGtttttt                          <  2:3877140/120‑1 (MQ=255)
                                                                                                        ttAAA‑TATAAATAATAAAAA‑‑TTTTTTTTTTTTTTTGGAAATAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTtat                        <  2:555742/128‑1 (MQ=255)
                                                                                                        ttAAA‑TAAAAATTTTAAAAA‑TTTTTTTTTTTTTTTTTGAACTAAAATATAATTTTAACAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTta                         <  1:2400694/128‑1 (MQ=255)
                                                                                                        ttAAA‑GAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGAAAAAAACATATAATTTTAACAATTATTAAAATTTAAATTTCAAAAATGAATTAATTTATTCTAAAAATTTTTAAATATAAATATATTTtaa                        >  2:1935705/1‑127 (MQ=255)
                                                                                                        ttAAA‑GAAAAATATTACAAC‑‑‑‑‑TTTTTTTTTTTTGCAACTAACAAATAATTTAACAAATTATTAGAATTTCAATTTCCAAAATGAATTTATTAATTATAATAATTTGAATATAAAAATTTATTTTatata                     >  2:40207/1‑127 (MQ=255)
                                                                                                         tAAA‑GAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAAAATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATAAATTGATTTATTCTAATAATTTTTGTATATATATTTTTTTtata                       >  2:3455825/1‑128 (MQ=255)
                                                                                                          aaa‑TAAAAATTTTAAAAA‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTtata                       <  1:315541/128‑1 (MQ=255)
                                                                                                          aaa‑GAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAAAATAAAATTTTACCAATTATAATAATTAAAATTTAACATATGATTTTATTTATTCTAAAAATTTTAAAAAATAAATGTTTTTtataa                      >  2:3025165/1‑127 (MQ=255)
                                                                                                            aataaaaaTATTAAAAC‑TCTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTatat                      <  1:2021249/125‑1 (MQ=255)
                                                                                                             ataaaaaTTTTACAA‑‑ATTTTTTTTTTTTTTTGGAAGTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCt                    <  1:2106889/126‑1 (MQ=255)
                                                                                                                 aaaTATTACAACTTTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTATAATTTAAATTTCACAGATGAATTTATTTCTTATAAAAATTTGTCTATATATTTGTTTTTTATATATaa                  >  2:3524496/1‑128 (MQ=255)
                                                                                                                  aaTATTTCAAA‑TTTTTTTTTTTTTTTTGGAACTAAAATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAAt                <  2:1637272/128‑1 (MQ=255)
                                                                                                                   atatTACAAC‑TTTTTTTTTTTTTTTT‑GAAATAAAATAAAATTTTACAAATTTTTATAATTTAAATTTAAAAATTGAATTTATTTCTTATAATAATTTTTAAATATTTATTTTTTTTATATATAAAtaa              >  1:60606/1‑126 (MQ=255)
                                                                                                                    tatTACAAC‑‑TTTTTTTTTTTTTTTGGACCAAAAATATAATTTTACAAATTATTAAAATTTCAATTTCACAGATTATTTGTTTTCTTATAATATTTTTTATATATTTATGTTTTTTATaaataaataat             >  1:3269577/1‑125 (MQ=255)
                                                                                                                    tatTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAg             <  1:435315/128‑1 (MQ=255)
                                                                                                                           aaaatttttatttttttttGTAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATc        <  2:770636/124‑1 (MQ=255)
                                                                                                                            aactttttttttttttttGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCAAATATGAATTGATTTATTCTAATAATTTGTATATATAGATTTTTTTTATATGTAAATAAGTGATct       >  2:375809/4‑128 (MQ=255)
                                                                                                                               tttttttttttttttGGAACTAATATATAATTTTAACAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATcttta    <  1:659033/128‑1 (MQ=255)
                                                                                                                               tttttttttttttttGGAAATAACATATAATTTTACCAATTATTAGAATTTCAATTTCAAAGATGAATTGATTTATTCTAATAATTTTTAAATATAGATTTTTTTTATATAAAAATCAGTTATattta    >  1:3002654/1‑128 (MQ=255)
                                                                                                                                ttttttttttttttGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTACACAGATGTATTTATTTATTCTAATAATTTTTCTATATATATGTTTTTTATATCTAAAGCAGTGATctttaa   >  2:2292502/1‑127 (MQ=255)
                                                                                                                                 |                                                                                                                               
TTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAA‑GAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATCTTTACT  >  CP016816/76769‑77023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.