New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 117946 =2200 (1.190)66 (0.040) 55/210 30.8 3.5% intergenic (+67/+792) JCVSYN2_00460/JCVSYN2_00465 ABC transporter substrate‑binding protein/spermidine/putrescine ABC transporter permease
?CP016816 = 117942 1807 (1.160)intergenic (+63/+796) JCVSYN2_00460/JCVSYN2_00465 ABC transporter substrate‑binding protein/spermidine/putrescine ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2220 total aligned reads displayed.

AAGGAAATTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTT  >  CP016816/117815‑118069
                                                                                                                               |                                                                                                                                  
aaGGAAATTGAAGAGAAGAATGAAAAAAAGAGTACGAAAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGcaacaa                                                                                                                                    <  2:2091041/128‑1 (MQ=255)
    aaaTTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tatt                                                                                                                             <  2:691030/128‑1 (MQ=255)
     aaTTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAATAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tatta                                                                                                                            <  2:1215873/128‑1 (MQ=255)
      aTTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tattat                                                                                                                           >  1:3766126/1‑128 (MQ=255)
      aTTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tattat                                                                                                                           >  1:3438603/1‑128 (MQ=255)
           agagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tattattatta                                                                                                                      <  2:2522934/128‑1 (MQ=255)
            gagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tattattattat                                                                                                                     <  2:2354374/128‑1 (MQ=255)
             agaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTATAAACAGCAACAA‑‑‑tattattattatt                                                                                                                    <  2:2953457/128‑1 (MQ=255)
              gaagaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTATAAACATCAACAA‑‑‑tattattatgatta                                                                                                                   >  2:2299818/1‑128 (MQ=255)
              gaagaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAAATTTAAACAGCAACAA‑‑‑tattattataatta                                                                                                                   >  2:843173/1‑128 (MQ=255)
               aagaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tattattattattat                                                                                                                  >  2:2184171/1‑128 (MQ=255)
               aagaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTAATGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑ttttattattattat                                                                                                                  >  2:1893867/1‑128 (MQ=255)
                agaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tattattattattatt                                                                                                                 <  1:3852093/128‑1 (MQ=255)
                agaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tattattattattatt                                                                                                                 >  1:2268914/1‑128 (MQ=255)
                 gaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tattattattattatta                                                                                                                >  2:3460868/1‑128 (MQ=255)
                 gaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tattattattattatta                                                                                                                >  2:3525317/1‑128 (MQ=255)
                 gaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACACAAACAA‑‑‑aattattattattatta                                                                                                                >  2:1769292/1‑128 (MQ=255)
                  aaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tattattattattattat                                                                                                               <  2:1683799/128‑1 (MQ=255)
                  aaTGAAAAAAAGACTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tattattattattattat                                                                                                               <  1:2577747/128‑1 (MQ=255)
                     gAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tattattattattattattat                                                                                                            <  1:883603/128‑1 (MQ=255)
                      aaaaaaaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTCTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑Tattattattattattattatt                                                                                                           >  1:948993/1‑128 (MQ=255)
                          aaaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTattaatt                                                                                                       >  1:2919439/1‑128 (MQ=255)
                           aaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTattaatta                                                                                                      >  1:1062265/1‑128 (MQ=255)
                           aaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTattaatta                                                                                                      <  2:2779007/128‑1 (MQ=255)
                            agagTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTAt                                                                                                     <  2:391305/128‑1 (MQ=255)
                            agagTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTATTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATAATTATTAATattaattaa                                                                                                     >  1:804261/1‑127 (MQ=255)
                             gagTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAATGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATc                                                                                                    <  1:142317/128‑1 (MQ=255)
                             gagTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATc                                                                                                    >  2:3678409/1‑128 (MQ=255)
                             gagTAAGATAGTAAAAATAAAAAACTAAATAATTAATTTTATAAGCAATTCCTCAATGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAAAAA‑‑‑TATTATTATTATTATTATTATTAATTATc                                                                                                    <  2:3995812/128‑1 (MQ=255)
                               gTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCaa                                                                                                  <  2:3823698/128‑1 (MQ=255)
                                tACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAg                                                                                                 <  1:2190544/128‑1 (MQ=255)
                                 aCGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGc                                                                                                >  1:99724/1‑128 (MQ=255)
                                 aCGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATAACTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGc                                                                                                <  1:3021354/128‑1 (MQ=255)
                                  cGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTCTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCa                                                                                               <  1:2853379/128‑1 (MQ=255)
                                  cGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGCATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCa                                                                                               >  2:1134246/1‑128 (MQ=255)
                                   gagaGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTAt                                                                                                     <  2:3417818/121‑1 (MQ=255)
                                   gagaGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCat                                                                                              <  2:1062265/128‑1 (MQ=255)
                                    agagTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCata                                                                                             <  2:2587364/128‑1 (MQ=255)
                                     gagTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATAATCAAGCaaat                                                                                            >  1:1722355/1‑128 (MQ=255)
                                      attaaaaataaaaaAATAAATAAATAAATATATAAGCAATATATCAATTTATTGATTTTTTATAAATATATAAATTTTAAACATCAAAAA‑‑‑TATTATTTTTATTATTATTATTAATTATCAAGCAtata                                                                                           <  2:1614889/126‑1 (MQ=255)
                                      agTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTATTAATTATCAAGCat                                                                                              >  2:3034157/1‑128 (MQ=255)
                                          aaaataaaaaACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAAtt                                                                                       <  1:2343059/128‑1 (MQ=255)
                                              taaaaaACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAat                                                                                   >  1:2411973/1‑128 (MQ=255)
                                               aaaaaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAata                                                                                  >  1:369250/1‑128 (MQ=255)
                                                 aaaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAatatt                                                                                >  2:1271554/1‑127 (MQ=255)
                                                 aaaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATg                                                                                >  1:1153055/1‑128 (MQ=255)
                                                 aaaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑‑‑‑TATTATTATTATTATTATTAATTATCAAGCATATAAATTAAATATGata                                                                             <  2:516679/128‑1 (MQ=255)
                                                   aaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGat                                                                              <  2:1972462/128‑1 (MQ=255)
                                                   aaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGat                                                                              <  1:2687252/128‑1 (MQ=255)
                                                    aCTAAATAAATAATTTTATAAGAAATAACTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGata                                                                             <  1:3383958/128‑1 (MQ=255)
                                                       aaataaatAATTTTATAAGCAATACCTCAATGTATTGCTTTTTTATAAAAATACAAATTTTAAACATCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATTAATTTAATATGATATAc                                                                          <  2:244074/128‑1 (MQ=255)
                                                        aataaataATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATAcc                                                                         >  2:3366064/1‑128 (MQ=255)
                                                        aataaataATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATAcc                                                                         <  1:639147/128‑1 (MQ=255)
                                                        aataaataATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATAcc                                                                         >  2:2035946/1‑128 (MQ=255)
                                                         ataaataaTTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGAtata                                                                           >  1:2646771/1‑128 (MQ=255)
                                                            aataatTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTAtt                                                                     <  2:2717173/128‑1 (MQ=255)
                                                            aataatTTTATAAGCAATACATCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTAtt                                                                     <  1:3233624/128‑1 (MQ=255)
                                                             ataatTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTAttt                                                                    >  1:714520/1‑128 (MQ=255)
                                                               aatTTTATAAGCAATACCTGAAGGTATTGATTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTa                                                                  <  2:3221289/128‑1 (MQ=255)
                                                               aatTTTATAAGCAATACCTCAAGGTATTCCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTa                                                                  <  1:2764775/128‑1 (MQ=255)
                                                                 ttttATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAgg                                                                <  1:1584669/128‑1 (MQ=255)
                                                                 ttttATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAgg                                                                >  2:3610884/1‑128 (MQ=255)
                                                                     ataAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGAt                                                            >  1:1247761/1‑128 (MQ=255)
                                                                      taAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGAtt                                                           <  2:1556802/128‑1 (MQ=255)
                                                                       aaGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTa                                                          <  1:561441/128‑1 (MQ=255)
                                                                            aTACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATg                                                     >  1:75596/1‑128 (MQ=255)
                                                                            aTACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATg                                                     <  2:2235986/128‑1 (MQ=255)
                                                                             tACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGa                                                    >  1:1505747/1‑128 (MQ=255)
                                                                             tACATCAAGTTATTTCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGa                                                    <  1:2107292/128‑1 (MQ=255)
                                                                              aCCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGaa                                                   <  1:3178445/128‑1 (MQ=255)
                                                                                  taaGGTATTGATTTTTTATAAATATACAAATTTTAAACAGAAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAAc                                               <  2:788388/127‑1 (MQ=255)
                                                                                   aaGCTATTGCTTATTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACg                                              <  2:1325935/128‑1 (MQ=255)
                                                                                    aGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAAATTAATATGATATACATATTTTAGATTATTAAAATGAAAAACGa                                             >  2:1453913/1‑128 (MQ=255)
                                                                                      gTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGt                                           <  1:3084146/128‑1 (MQ=255)
                                                                                       tATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGtt                                          >  1:3924354/1‑128 (MQ=255)
                                                                                        aTTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGttt                                         >  2:2659071/1‑128 (MQ=255)
                                                                                        aTTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACATATTTTAGGTGATTAAAATGAAAAACGAGttt                                         >  1:2501171/1‑128 (MQ=255)
                                                                                          tGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTa                                       <  1:4029729/128‑1 (MQ=255)
                                                                                            cTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAat                                     <  2:3162702/128‑1 (MQ=255)
                                                                                            cTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAat                                     <  1:474716/128‑1 (MQ=255)
                                                                                            cTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAat                                     <  2:1826269/128‑1 (MQ=255)
                                                                                              tttttATAAAAATACAAATTTTAAACAGCAACAA‑‑‑‑‑‑TATTATTATTATTATTATTAATTATCAAGAATATAAATTTAATATGATATACATATTTTAGTTGATTAAAATTAAATACGAGTTATAATATaaa                                >  1:1006400/1‑128 (MQ=255)
                                                                                                 ttATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATaaa                                >  1:3533488/1‑128 (MQ=255)
                                                                                                    taAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATaaa                                >  1:1873871/1‑128 (MQ=255)
                                                                                                     aaaaaTACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATCTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGAtt                            >  2:914644/1‑128 (MQ=255)
                                                                                                       aaaTACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTa                          >  1:2033732/1‑128 (MQ=255)
                                                                                                         aTACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTaaa                        <  2:740411/128‑1 (MQ=255)
                                                                                                          tACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACTTGTTTTAATATAAATATATaaaa                       >  1:1329987/1‑128 (MQ=255)
                                                                                                          tACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACTAGTTTTAATATAAAGATTTaaaa                       >  1:3613827/1‑128 (MQ=255)
                                                                                                                ttttAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAAcaacaa                 <  2:441770/128‑1 (MQ=255)
                                                                                                                ttttAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAAcaacaa                 <  1:1950309/128‑1 (MQ=255)
                                                                                                                tattAAACATCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAAcaacaa                 <  2:3278644/126‑1 (MQ=255)
                                                                                                                 tttAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAg                <  1:1647378/128‑1 (MQ=255)
                                                                                                                 tttAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAg                >  2:1385558/1‑128 (MQ=255)
                                                                                                                   tAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACg                                              <  2:620415/96‑1 (MQ=255)
                                                                                                                    aaaCAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTg             >  2:2864093/1‑128 (MQ=255)
                                                                                                                       cAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGTTGATTAAAATGAAAAACGAGTTTTAATATAAAGATATAAAAAAACAATATGaaa          >  2:3078168/1‑128 (MQ=255)
                                                                                                                           aacaa‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACtat      >  1:3301306/1‑128 (MQ=255)
                                                                                                                            acaa‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACtata     <  1:1808361/128‑1 (MQ=255)
                                                                                                                              aa‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATAtt   <  2:3740453/128‑1 (MQ=255)
                                                                                                                               |                                                                                                                                  
AAGGAAATTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTT  >  CP016816/117815‑118069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.