| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_021214 | 157995 = | 182 (0.810) | 10 (0.050) | 7/434 | 13.5 | 5.5% | coding (478/648 nt) | TMARI_RS00740 | lactate utilization protein |
| ? | NC_021214 | 158204 = | 171 (0.800) | coding (1857/1872 nt) | TMARI_RS00745 | DUF4914 domain‑containing protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_021214/158241‑157995‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aattcatcggTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCTTTTTCATAAGCTTCCTCACCTACTTCGGATTGCAAGTGTGGCTGCAGAAGTTCTTTCGGAATGGTGTTTCCTTCGATCTTCATCTCTTTGAGAGAAAAACC > NC_021214/158204‑158440 TCGACGACGGATCTCTCGATGATTATCTCAATATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCATATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCTCGGTGTTTCCAGATTCAGTCGTTTCGAA < 2:697855/239‑1TCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAA > 2:241702/1‑239 ACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTC > 2:339650/1‑239 CGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCA < 1:376704/239‑1 GACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCAT < 2:937851/239‑1 GACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCA < 2:930329/238‑1 CGGATCTCTCGATGACTATCTCAAGATCATCCCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCG < 1:197228/239‑1 CGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCG < 1:239149/239‑1 GGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGG < 1:733734/239‑1 CCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTC > 2:254476/1‑237 CCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGGTATGATCTTGAGCTAGTCATTGAGAGATCCGTCGTCGAGACAGCACTGGATGATATCTCT > 2:824792/1‑239 CCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCT > 2:579223/1‑239 CCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCT > 1:789490/1‑239 AGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTT > 1:153516/1‑239 GAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTC < 1:579223/239‑1 ACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTC < 1:254476/239‑1 ACCTTACCGGCTGTCTCACCCCAGATTCCTCTCACAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGATTCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAAGTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTC < 1:824792/239‑1 CTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAG < 2:153516/238‑1 CTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCT < 2:789490/239‑1 TCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCTTTTTCATAAGCTTCCTCACCTACTTCGGATTGCAAGTGTGGCTGCAGAAGTTCTTTCGGAATGGTGTTTCCTTCGATCTTCATCTCTTTGAGAGAA < 1:174586/239‑1 CATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCTTTTTCATAAGCTTCCTCACCTACTTCGGATTGCAAGTGTGGCTGCAGAAGTTCTTTCGGAATGGTGTTTCCTTCGATCTTCATCTCTTTGAGAGAAA > 2:534298/1‑239 CATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCTTTTTCATAAGCTTCCTCACCTACTTCGGATTGCAAGTGTGGCTGCAGAAGTTCTTTCGGAATGGTGTTTCCTTCGATCTTCATATCTTTGAGAGAAA > 2:202607/1‑239 GGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCTTTTTCATAAGCTTCCTCCCCTACTTCGGATTGCAAGTGTGGCTGCAGAAGTTCTTTCGGAATGGTGTTTCCTTCGATCTTCATCTCTTTGAGAGAAAAACC < 1:215526/239‑1 TCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_021214/158241‑157995‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aattcatcggTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCTTTTTCATAAGCTTCCTCACCTACTTCGGATTGCAAGTGTGGCTGCAGAAGTTCTTTCGGAATGGTGTTTCCTTCGATCTTCATCTCTTTGAGAGAAAAACC > NC_021214/158204‑158440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |