| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_021214 | 157995 = | 251 (0.880) | 9 (0.030) | 6/430 | 23.1 | 3.6% | coding (478/648 nt) | TMARI_RS00740 | lactate utilization protein |
| ? | NC_021214 | 158204 = | 246 (0.900) | coding (1857/1872 nt) | TMARI_RS00745 | DUF4914 domain‑containing protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_021214/158241‑157995‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aattcatcggTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCTTTTTCATAAGCTTCCTCACCTACTTCGGATTGCAAGTGTGGCTGCAGAAGTTCTTTCGGAATGGTGTTTCCTTCGATCTTCATCTCTTTGAGAGAAAAACCGA > NC_021214/158204‑158442 TCGACGTCGTATCTCTCGATGACTATCTCAATATCATACCGATGAATTTTTAAAGCGGGTAAAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAAT < 1:227469/240‑1TCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAGGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAAT < 2:276716/240‑1 GACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTC > 1:83825/1‑240 GACGGATCTCTCGATGACTATCTCAAGATCATACCGATGTATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATC > 1:1171194/1‑240 GACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATC > 2:266111/1‑240 GACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATC > 2:540875/1‑240 GACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTATGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATC > 2:188341/1‑240 CGGATCTCTCGATGACTATTTCAAGATCAACGCGATGAATGTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGGAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGG < 1:523927/240‑1 GATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAAT > 1:1099984/1‑200 GATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAAT < 2:1099984/200‑1 CCCGCTTTTTTAAAGTCCGACGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCT > 2:1142818/1‑240 CCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCT > 1:755492/1‑240 CCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCT > 2:607708/1‑240 CCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCT > 1:255343/1‑240 CGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTT > 1:94695/1‑239 GAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCT < 1:607708/240‑1 CTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCTT < 2:255343/240‑1 TTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCTTTTTCATAAGCTTCCTCACCTACTTCGGATTGCAAGTGTGGCTGCAGAAGTTCTTTCGGA < 2:755492/240‑1 TGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCTTTTTCATAAGCTTCCTCACCTACTTCGGATTGCAAGTGTGGCTGCAGAAGTTCTTTCGGAAT < 2:94695/240‑1 ATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCTCCTTTTTCATAAGCTTCCTCACCTACTTCGGATTGCAAGTGTGGCTGCAGAAGTTCTTTCGGAATGGTGTTTCCTTCGATCTTCATCTCTTTGAGAGA < 1:1149118/240‑1 ATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCTTTTTCATAAGCTTCCTCACCTACTTCGGATTGCAAGTGTGGCTGCAGAAGTTCTTTCGGAATGGTGTTTCCTTCGATCTTCATCTCTTTGAGAGA > 1:78538/1‑240 ATTCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCTTTTTCATAAGCTTCCTCACCTACTTCGGATTGCAAGTGTGGCTGCAGAAGTTCTTTCGGAATGGTGTTTCCTTCGATCTTCATCTCTTTGAGAGA < 1:59067/240‑1 TCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCTTTTTCATAAGCTTCCTCACCTACTTCGGATTGCAAGTGTGGCTGCAGAAGTTCTTTCGGAATGGTGTTTCCTTCGCTCTTCATTTCTTTGAGAGAAA > 1:6150/1‑240 TCATCGGTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCTTTTTCATAAGCTTCCTCACCTACTTCGGATTGCAAGTGTGGCTGCAGAAGTTCTTTCGGAATGGTGTTTCCTTCGATCTTCATCTCTTTGAGAGAAA > 2:988029/1‑240 GTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCTTTTTCATAAGCTTCCTCACCTACTTCGGATTGCAAGTGTGGCaatcc > 2:364331/1‑179 GTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCTTTTTCATAAGCTTCCTCACCTACTTCGGATTGCAAGTGTGGCaatcc < 1:364331/184‑6 GTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCTTTTTCATAAGCTTCCTCACCTACTTCGGATTGCAAGTGTGGCTGCAGAAGTTCTTTCGGAATGGTGTTTCCTTCGATCTTCATCTCTTTGAGAGAAAAACCGA > 1:954414/1‑240 TCGACGACGGATCTCTCGATGACTATCTCAAGATCATACCGATGAATTTTTAAAGCGGGGAGAATTCCCCGCTTTTTTAAAGTCCGAAGTCTTCCAGCGTCAGAATCACCTTGAACCTTCCCGGCTGTCTCACCCCAGATTCCACTACCAGAAAGTAGTCACAGATCCTCTGAGGAGAAGAACAGTCTGCACAGAATCCTGTTTTTGTGCACGGTGTTTCCAGATTCAGTCGTTTCGAATTCATCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_021214/158241‑157995‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aattcatcggTATGATCTTGAGATAGTCATCGAGAGATCCGTCGTCGAGACAGCACTGGATGATTTCTCTTCCCACGGGATTCAGGTCTTCGGTCAGGAATTTTTTCAGTTCTCTCTTGAAGAAGTCTTTCAACTCTTGGGCACCTTTTTCATAAGCTTCCTCACCTACTTCGGATTGCAAGTGTGGCTGCAGAAGTTCTTTCGGAATGGTGTTTCCTTCGATCTTCATCTCTTTGAGAGAAAAACCGA > NC_021214/158204‑158442 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |