Frequency Filtering Thresholds

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Ignored Genes

Enter gene(s) separated by ',' ex: tpoB,folD

Ignored Mutations

Mut ID Position Mutation Type Sequence Change Gene Function Product GO Process GO Component Details
481286 257908 DEL Δ776 bp [crl]
564207 3560455 INS +G pseudogene, DNA-binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon/pseudogene, DNA-binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon intergenic (‑2/+1)
566843 2173363 DEL Δ2 bp pseudogene, galactitol-specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol-specific enzyme IIC/pseudogene, galactitol-specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol-specific enzyme IIC intergenic (‑1/+1)
612037 1299499 DEL Δ1,199 bp UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein intergenic (+254/‑485)
644028 4296381 INS +GC glutamate/aspartate:proton symporter/Sel1 family TPR-like repeat protein intergenic (+587/+55)
673292 564107 MOB IS2 (+) +5 bp response regulator family protein coding (370‑374/633 nt)
812743 1429024 SNP A→C pseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N-ter deletion/Rac prophage; putative tail fiber protein intergenic (+40/‑25)
818756 1636413 SNP C→A pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin/uncharacterized protein, Qin prophage intergenic (‑46/‑343)
818757 1636423 SNP T→C pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin/uncharacterized protein, Qin prophage intergenic (‑56/‑333)
832905 580697 SNP T→C DUF3950 family protein, DLP12 prophage/DLP12 prophage; DNA packaging protein intergenic (‑252/‑137)
1102505 1978503 DEL Δ776 bp insB1,insA
1103452 2173361 DEL Δ2 bp pseudogene, galactitol-specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol-specific enzyme IIC pseudogene (1‑2/442 nt)
1103621 4296060 SNP C→T glutamate/aspartate:proton symporter/Sel1 family TPR-like repeat protein intergenic (+266/+376)
1103622 4296380 INS +CG glutamate/aspartate:proton symporter/Sel1 family TPR-like repeat protein intergenic (+586/+56)
1602433 566396 SNP T→A pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (21/312 nt)
1602434 566414 SNP A→G pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (39/312 nt)
1602435 566435 SNP G→A pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (60/312 nt)
1602436 566444 SNP T→C pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (69/312 nt)
1602437 566451 SNP T→C pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (76/312 nt)
1602438 566463 SNP T→C pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (88/312 nt)
1602439 566468 SNP C→T pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (93/312 nt)
1602440 566492 SUB 2 bp→TA pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (117‑118/312 nt)
1602441 566498 SNP C→T pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (123/312 nt)
1602442 566510 SNP G→C pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (135/312 nt)
1602443 566513 SNP C→T pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (138/312 nt)
1602444 566519 SNP T→C pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (144/312 nt)
1602445 566522 SNP C→A pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (147/312 nt)
1602446 566528 SNP A→G pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (153/312 nt)
1602447 566531 SUB 3 bp→TGT pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (156‑158/312 nt)
1602448 566535 SUB 2 bp→CA pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (160‑161/312 nt)
1602449 566543 SNP A→T pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (168/312 nt)
1602450 566547 SNP C→A pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (172/312 nt)
1602451 566565 SNP A→G pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (190/312 nt)
1602452 566570 SNP A→C pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (195/312 nt)
1602453 566597 SNP T→C pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (222/312 nt)
1602454 566651 SNP T→C pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related pseudogene (276/312 nt)
1602455 566728 SNP G→T pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (45/93 nt)
1602456 566740 SNP A→G pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (57/93 nt)
1602457 566742 SNP A→C pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (59/93 nt)
1602458 566756 SNP G→C pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (73/93 nt)
1602459 566770 SNP C→A pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (87/93 nt)
1602460 568052 SNP T→C pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (18/213 nt)
1602461 568067 SNP G→A pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (33/213 nt)
1602462 568076 SNP A→T pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (42/213 nt)
1602463 568077 SNP A→C pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (43/213 nt)
1602464 568079 SNP C→T pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (45/213 nt)
1602465 568085 SNP C→T pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (51/213 nt)
1602466 568086 SNP G→A pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (52/213 nt)
1602467 568088 SNP T→C pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (54/213 nt)
1602468 568091 SNP T→A pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (57/213 nt)
1602469 568124 SNP C→T pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (90/213 nt)
1602470 568133 SNP A→G pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (99/213 nt)
1602471 568140 SNP T→C pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (106/213 nt)
1602472 568152 SNP G→A pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (118/213 nt)
1602473 568163 SNP T→C pseudogene, DLP12 prophage;Phage or Prophage Related pseudogene (129/213 nt)
1602474 578118 SNP A→C DLP12 prophage; putative murein endopeptidase V4V (GTA→GTC)
1602475 578130 SNP A→C DLP12 prophage; putative murein endopeptidase I8I (ATA→ATC)
1602476 578140 SNP A→G DLP12 prophage; putative murein endopeptidase I12V (ATT→GTT)
1602477 578158 SNP A→T DLP12 prophage; putative murein endopeptidase S18C (AGC→TGC)
1602478 578172 SNP G→T DLP12 prophage; putative murein endopeptidase A22A (GCG→GCT)
1602479 578175 SNP C→T DLP12 prophage; putative murein endopeptidase V23V (GTC→GTT)
1602480 578196 SNP A→C DLP12 prophage; putative murein endopeptidase A30A (GCA→GCC)
1602481 578199 SNP C→T DLP12 prophage; putative murein endopeptidase I31I (ATC→ATT)
1602482 578200 SNP G→A DLP12 prophage; putative murein endopeptidase A32T (GCC→ACC)
1602483 578210 SNP T→C DLP12 prophage; putative murein endopeptidase V35A (GTC→GCC)
1602484 578244 SNP A→G DLP12 prophage; putative murein endopeptidase L46L (CTA→CTG)
1602485 578331 SNP G→T DLP12 prophage; putative murein endopeptidase|DLP12 prophage; putative lipoprotein A75A (GCG→GCT) R2L (CGA→CTA)
1602486 578427 SNP G→C DLP12 prophage; putative murein endopeptidase|DLP12 prophage; putative lipoprotein T107T (ACG→ACC) R34P (CGG→CCG)
1602487 578809 SNP T→C DLP12 prophage; putative lipoprotein T29A (ACA→GCA)
1602488 578811 SNP T→G DLP12 prophage; putative lipoprotein Q28P (CAG→CCG)
1602489 578831 SNP T→C DLP12 prophage; putative lipoprotein T21T (ACA→ACG)
1602490 579004 SNP C→T DLP12 prophage; putative lipoprotein/DLP12 prophage; uncharacterized protein intergenic (‑111/+180)
1602491 579095 DEL Δ1 bp DLP12 prophage; putative lipoprotein/DLP12 prophage; uncharacterized protein intergenic (‑202/+89)
1602492 579127 SNP T→C DLP12 prophage; putative lipoprotein/DLP12 prophage; uncharacterized protein intergenic (‑234/+57)
1602493 579134 SNP T→C DLP12 prophage; putative lipoprotein/DLP12 prophage; uncharacterized protein intergenic (‑241/+50)
1602494 579146 SNP A→G DLP12 prophage; putative lipoprotein/DLP12 prophage; uncharacterized protein intergenic (‑253/+38)
1602495 579271 SNP G→A DLP12 prophage; uncharacterized protein H108H (CAC→CAT)
1602496 579285 SNP T→C DLP12 prophage; uncharacterized protein I104V (ATT→GTT)
1602497 579385 SNP A→G DLP12 prophage; uncharacterized protein N70N (AAT→AAC)
1602498 579457 SNP A→G DLP12 prophage; uncharacterized protein I46I (ATT→ATC)
1602499 579502 SNP A→G DLP12 prophage; uncharacterized protein N31N (AAT→AAC)
1602500 579540 SNP T→C DLP12 prophage; uncharacterized protein N19D (AAC→GAC)
1602501 579651 SNP C→T DLP12 prophage; uncharacterized protein/DLP12 prophage; uncharacterized protein intergenic (‑57/‑229)
1602502 579671 SNP T→C DLP12 prophage; uncharacterized protein/DLP12 prophage; uncharacterized protein intergenic (‑77/‑209)
1602503 579717 SNP A→C DLP12 prophage; uncharacterized protein/DLP12 prophage; uncharacterized protein intergenic (‑123/‑163)
1602504 579811 SNP C→T DLP12 prophage; uncharacterized protein/DLP12 prophage; uncharacterized protein intergenic (‑217/‑69)
1602505 580020 SNP G→A DLP12 prophage; uncharacterized protein R47R (AGG→AGA)
1602506 580115 SNP C→T DLP12 prophage; uncharacterized protein/DUF3950 family protein, DLP12 prophage intergenic (+29/+136)
1602507 580119 SUB 2 bp→GT DLP12 prophage; uncharacterized protein/DUF3950 family protein, DLP12 prophage intergenic (+33/+131)
1602510 580717 SNP G→A DUF3950 family protein, DLP12 prophage/DLP12 prophage; DNA packaging protein intergenic (‑272/‑117)
1602511 580729 SNP A→T DUF3950 family protein, DLP12 prophage/DLP12 prophage; DNA packaging protein intergenic (‑284/‑105)
1602512 580746 SNP C→T DUF3950 family protein, DLP12 prophage/DLP12 prophage; DNA packaging protein intergenic (‑301/‑88)
1602513 580830 SUB 2 bp→AA DUF3950 family protein, DLP12 prophage/DLP12 prophage; DNA packaging protein intergenic (‑385/‑3)
1602514 581042 SNP T→G DLP12 prophage; DNA packaging protein L70R (CTG→CGG)
1602515 581056 SNP A→G DLP12 prophage; DNA packaging protein T75A (ACA→GCA)
1602516 581073 SNP G→A DLP12 prophage; DNA packaging protein G80G (GGG→GGA)
1602517 581133 SNP A→G DLP12 prophage; DNA packaging protein K100K (AAA→AAG)
1602518 581227 SNP A→C DLP12 prophage; DNA packaging protein I132L (ATC→CTC)
1602524 816956 SNP C→A putative CofD superfamily transferase/molybdopterin biosynthesis protein A intergenic (‑309/‑88)
1602526 1423225 SNP G→A pseudogene, Rac prophage; Bacteriophage Rz lysis protein family;Phage or Prophage Related; putative Rac prophage endopeptidase; completely contained in another CDS pseudogene (25/444 nt)
1602527 1423244 SNP G→C pseudogene, Rac prophage; Bacteriophage Rz lysis protein family;Phage or Prophage Related; putative Rac prophage endopeptidase; completely contained in another CDS pseudogene (44/444 nt)
1602528 1423272 SUB 2 bp→TA pseudogene, Rac prophage; Bacteriophage Rz lysis protein family;Phage or Prophage Related; putative Rac prophage endopeptidase; completely contained in another CDS pseudogene (72‑73/444 nt)
1602529 1423283 SUB 2 bp→CC pseudogene, Rac prophage; Bacteriophage Rz lysis protein family;Phage or Prophage Related; putative Rac prophage endopeptidase; completely contained in another CDS pseudogene (83‑84/444 nt)
1602530 1423338 SNP G→C pseudogene, Rac prophage; Bacteriophage Rz lysis protein family;Phage or Prophage Related; putative Rac prophage endopeptidase; completely contained in another CDS pseudogene (138/444 nt)
1602531 1423404 SNP G→T pseudogene, Rac prophage; Bacteriophage Rz lysis protein family;Phage or Prophage Related; putative Rac prophage endopeptidase; completely contained in another CDS|Rac prophage; putative lipoprotein pseudogene (204/444 nt)R2L (CGA→CTA)
1602532 1428925 SNP C→T pseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N-ter deletion pseudogene (130/189 nt)
1602533 1428945 SNP C→T pseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N-ter deletion pseudogene (150/189 nt)
1602534 1428954 SNP T→A pseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N-ter deletion pseudogene (159/189 nt)
1602535 1428963 SNP G→T pseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N-ter deletion pseudogene (168/189 nt)
1602536 1428966 SNP T→G pseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N-ter deletion pseudogene (171/189 nt)
1602537 1428978 SNP G→A pseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N-ter deletion pseudogene (183/189 nt)
1602538 1429021 SUB 2 bp→AA pseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N-ter deletion/Rac prophage; putative tail fiber protein intergenic (+37/‑27)
1602539 1429027 SNP C→T pseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N-ter deletion/Rac prophage; putative tail fiber protein intergenic (+43/‑22)
1602540 1429069 SNP T→A Rac prophage; putative tail fiber protein G7G (GGT→GGA)
1602541 1429072 SNP A→C Rac prophage; putative tail fiber protein V8V (GTA→GTC)
1602542 1429111 SNP A→C Rac prophage; putative tail fiber protein T21T (ACA→ACC)
1602543 1429114 SNP C→T Rac prophage; putative tail fiber protein I22I (ATC→ATT)
1602544 1429126 SNP A→C Rac prophage; putative tail fiber protein A26A (GCA→GCC)
1602545 1429128 SNP A→G Rac prophage; putative tail fiber protein K27R (AAA→AGA)
1602546 1429160 SNP C→G Rac prophage; putative tail fiber protein L38V (CTG→GTG)
1602547 1429164 SNP C→G Rac prophage; putative tail fiber protein A39G (GCC→GGC)
1602548 1429171 SNP A→G Rac prophage; putative tail fiber protein E41E (GAA→GAG)
1602549 1429204 SNP C→T Rac prophage; putative tail fiber protein D52D (GAC→GAT)
1602550 1429207 SNP T→G Rac prophage; putative tail fiber protein V53V (GTT→GTG)
1602551 1429225 SNP C→T Rac prophage; putative tail fiber protein S59S (AGC→AGT)
1602552 1429228 SNP T→C Rac prophage; putative tail fiber protein V60V (GTT→GTC)
1602553 1429231 SNP T→C Rac prophage; putative tail fiber protein I61I (ATT→ATC)
1602554 1429235 SUB 2 bp→CA Rac prophage; putative tail fiber protein coding (187‑188/3363 nt)
1602555 1429240 SNP G→T Rac prophage; putative tail fiber protein V64V (GTG→GTT)
1602556 1429243 SNP A→C Rac prophage; putative tail fiber protein E65D (GAA→GAC)
1602557 1429246 SNP A→T Rac prophage; putative tail fiber protein G66G (GGA→GGT)
1602558 1429249 SNP C→T Rac prophage; putative tail fiber protein F67F (TTC→TTT)
1602559 1429252 SNP G→A Rac prophage; putative tail fiber protein P68P (CCG→CCA)
1602560 1429255 SNP G→A Rac prophage; putative tail fiber protein P69P (CCG→CCA)
1602561 1429258 SNP A→G Rac prophage; putative tail fiber protein S70S (TCA→TCG)
1602562 1429261 SNP T→C Rac prophage; putative tail fiber protein H71H (CAT→CAC)
1602563 1429273 SNP T→C Rac prophage; putative tail fiber protein I75I (ATT→ATC)
1602564 1429291 SNP T→A Rac prophage; putative tail fiber protein S81S (TCT→TCA)
1602565 1429297 SNP C→G Rac prophage; putative tail fiber protein P83P (CCC→CCG)
1602566 1429300 SNP T→G Rac prophage; putative tail fiber protein G84G (GGT→GGG)
1602567 1429319 SNP G→T Rac prophage; putative tail fiber protein G91C (GGT→TGT)
1602568 1429345 SNP T→G Rac prophage; putative tail fiber protein R99R (CGT→CGG)
1602569 1429353 SUB 2 bp→TG Rac prophage; putative tail fiber protein coding (305‑306/3363 nt)
1602570 1429360 SNP C→T Rac prophage; putative tail fiber protein R104R (CGC→CGT)
1602571 1429364 SNP T→C Rac prophage; putative tail fiber protein F106L (TTT→CTT)
1602572 1429404 SNP C→T Rac prophage; putative tail fiber protein A119V (GCG→GTG)
1602573 1429416 SUB 2 bp→GT Rac prophage; putative tail fiber protein coding (368‑369/3363 nt)
1602574 1429425 SNP C→A Rac prophage; putative tail fiber protein A126D (GCC→GAC)
1602575 1429435 SNP G→A Rac prophage; putative tail fiber protein K129K (AAG→AAA)
1602576 1429442 SNP A→G Rac prophage; putative tail fiber protein S132G (AGT→GGT)
1602577 1429444 SNP T→C Rac prophage; putative tail fiber protein S132S (AGT→AGC)
1602578 1429453 SNP C→T Rac prophage; putative tail fiber protein S135S (AGC→AGT)
1602579 1429454 SNP A→G Rac prophage; putative tail fiber protein T136A (ACA→GCA)
1602580 1429462 SNP C→T Rac prophage; putative tail fiber protein A138A (GCC→GCT)
1602581 1429463 SNP C→G Rac prophage; putative tail fiber protein R139G (CGT→GGT)
1602582 1429464 SNP G→C Rac prophage; putative tail fiber protein R139P (CGT→CCT)
1602583 1429466 SNP G→C Rac prophage; putative tail fiber protein E140Q (GAG→CAG)
1602584 1429470 SNP C→T Rac prophage; putative tail fiber protein A141V (GCG→GTG)
1602585 1429471 SNP G→C Rac prophage; putative tail fiber protein A141A (GCG→GCC)
1602586 1429474 SNP A→G Rac prophage; putative tail fiber protein A142A (GCA→GCG)
1602587 1429475 SNP A→G Rac prophage; putative tail fiber protein T143A (ACC→GCC)
1602588 1429479 SNP A→T Rac prophage; putative tail fiber protein H144L (CAT→CTT)
1602589 1429482 SNP C→T Rac prophage; putative tail fiber protein A145V (GCG→GTG)
1602590 1429484 SNP G→A Rac prophage; putative tail fiber protein A146T (GCT→ACT)
1602591 1429492 SNP T→A Rac prophage; putative tail fiber protein A148A (GCT→GCA)
1602592 1429493 SNP G→A Rac prophage; putative tail fiber protein A149T (GCG→ACG)
1602593 1429495 SNP G→T Rac prophage; putative tail fiber protein A149A (GCG→GCT)
1602594 1429510 SNP A→C Rac prophage; putative tail fiber protein A154A (GCA→GCC)
1602595 1429522 SNP A→C Rac prophage; putative tail fiber protein S158S (TCA→TCC)
1602596 1429534 SNP C→T Rac prophage; putative tail fiber protein A162A (GCC→GCT)
1602597 1429537 SNP G→A Rac prophage; putative tail fiber protein A163A (GCG→GCA)
1602598 1429543 SNP G→A Rac prophage; putative tail fiber protein S165S (TCG→TCA)
1602599 1429550 SNP T→G Rac prophage; putative tail fiber protein S168A (TCA→GCA)
1602600 1429551 SNP C→A Rac prophage; putative tail fiber protein S168* (TCA→TAA)
1602601 1429558 SNP T→C Rac prophage; putative tail fiber protein S170S (TCT→TCC)
1602602 1429562 SNP A→G Rac prophage; putative tail fiber protein S172G (AGC→GGC)
1602603 1429569 SNP G→A Rac prophage; putative tail fiber protein G174E (GGA→GAA)
1602604 1429571 SNP A→G Rac prophage; putative tail fiber protein T175A (ACG→GCG)
1602605 1429580 SNP A→G Rac prophage; putative tail fiber protein T178A (ACA→GCA)
1602606 1429597 SUB 3 bp→GGA Rac prophage; putative tail fiber protein coding (549‑551/3363 nt)
1602607 1429609 SNP T→C Rac prophage; putative tail fiber protein A187A (GCT→GCC)
1602608 1429612 SNP C→A Rac prophage; putative tail fiber protein A188A (GCC→GCA)
1602609 1429615 SNP T→C Rac prophage; putative tail fiber protein A189A (GCT→GCC)
1602610 1429632 SNP G→A Rac prophage; putative tail fiber protein S195N (AGC→AAC)
1602611 1429682 SNP T→G Rac prophage; putative tail fiber protein S212A (TCA→GCA)
1602612 1429692 SNP T→A Rac prophage; putative tail fiber protein L215Q (CTA→CAA)
1602613 1429702 SNP A→C Rac prophage; putative tail fiber protein A218A (GCA→GCC)
1602614 1429708 SNP A→G Rac prophage; putative tail fiber protein T220T (ACA→ACG)
1602615 1429714 SNP A→C Rac prophage; putative tail fiber protein A222A (GCA→GCC)
1602616 1429724 SNP A→G Rac prophage; putative tail fiber protein T226A (ACC→GCC)
1602617 1429732 SNP G→A Rac prophage; putative tail fiber protein K228K (AAG→AAA)
1602618 1429735 SNP A→G Rac prophage; putative tail fiber protein A229A (GCA→GCG)
1602619 1429741 SNP A→G Rac prophage; putative tail fiber protein E231E (GAA→GAG)
1602620 1429744 SNP T→C Rac prophage; putative tail fiber protein A232A (GCT→GCC)
1602621 1429747 SNP G→C Rac prophage; putative tail fiber protein A233A (GCG→GCC)
1602622 1429750 SNP C→T Rac prophage; putative tail fiber protein T234T (ACC→ACT)
1602623 1429753 SNP G→A Rac prophage; putative tail fiber protein S235S (TCG→TCA)
1602624 1429756 SNP C→A Rac prophage; putative tail fiber protein A236A (GCC→GCA)
1602625 1429759 SNP G→A Rac prophage; putative tail fiber protein R237R (CGG→CGA)
1602626 1429767 SNP C→T Rac prophage; putative tail fiber protein A240V (GCG→GTG)
1602627 1429780 SNP A→G Rac prophage; putative tail fiber protein E244E (GAA→GAG)
1602628 1429783 SNP G→A Rac prophage; putative tail fiber protein A245A (GCG→GCA)
1602629 1429816 SNP C→T Rac prophage; putative tail fiber protein S256S (AGC→AGT)
1602630 1429820 SNP A→G Rac prophage; putative tail fiber protein S258G (AGT→GGT)
1602631 1429823 SNP A→C Rac prophage; putative tail fiber protein S259R (AGT→CGT)
1602632 1429851 SNP G→A Rac prophage; putative tail fiber protein G268E (GGA→GAA)
1602633 1429858 SNP C→T Rac prophage; putative tail fiber protein S270S (TCC→TCT)
1602634 1429861 SNP G→C Rac prophage; putative tail fiber protein A271A (GCG→GCC)
1602635 1429863 SNP A→G Rac prophage; putative tail fiber protein K272R (AAG→AGG)
1602636 1429888 SNP C→T Rac prophage; putative tail fiber protein N280N (AAC→AAT)
1602637 1429897 SNP T→A Rac prophage; putative tail fiber protein S283S (TCT→TCA)
1602638 1429906 SNP G→A Rac prophage; putative tail fiber protein T286T (ACG→ACA)
1602639 1429914 SNP G→A Rac prophage; putative tail fiber protein G289E (GGA→GAA)
1602640 1429917 SNP A→G Rac prophage; putative tail fiber protein Q290R (CAG→CGG)
1602641 1429927 SNP G→T Rac prophage; putative tail fiber protein S293S (TCG→TCT)
1602642 1429930 SNP T→C Rac prophage; putative tail fiber protein A294A (GCT→GCC)
1602643 1429938 SNP G→A Rac prophage; putative tail fiber protein G297D (GGC→GAC)
1602644 1429940 SNP T→G Rac prophage; putative tail fiber protein S298A (TCA→GCA)
1602645 1430314 SNP T→G Rac prophage; putative tail fiber protein A422A (GCT→GCG)
1602646 1430317 SNP C→A Rac prophage; putative tail fiber protein G423G (GGC→GGA)
1602647 1430324 SNP A→G Rac prophage; putative tail fiber protein T426A (ACG→GCG) ‡
1602648 1430325 SNP C→T Rac prophage; putative tail fiber protein T426M (ACG→ATG) ‡
1602649 1430326 SNP G→A Rac prophage; putative tail fiber protein T426T (ACG→ACA) ‡
1602650 1430327 SNP G→T Rac prophage; putative tail fiber protein A427S (GCG→TCG)
1602651 1430329 SNP G→A Rac prophage; putative tail fiber protein A427A (GCG→GCA)
1602652 1430333 SNP G→T Rac prophage; putative tail fiber protein A429S (GCT→TCT)
1602653 1430335 SNP T→G Rac prophage; putative tail fiber protein A429A (GCT→GCG)
1602654 1430348 SNP A→G Rac prophage; putative tail fiber protein T434A (ACG→GCG)
1602655 1430353 SNP G→A Rac prophage; putative tail fiber protein A435A (GCG→GCA)
1602656 1430357 SNP T→G Rac prophage; putative tail fiber protein S437A (TCC→GCC)
1602657 1430359 SNP C→G Rac prophage; putative tail fiber protein S437S (TCC→TCG)
1602658 1430367 SNP C→T Rac prophage; putative tail fiber protein T440M (ACG→ATG)
1602659 1430368 SNP G→A Rac prophage; putative tail fiber protein T440T (ACG→ACA)
1602660 1430371 SNP C→T Rac prophage; putative tail fiber protein R441R (CGC→CGT)
1602661 1430374 SNP C→A Rac prophage; putative tail fiber protein A442A (GCC→GCA)
1602662 1430377 SNP G→A Rac prophage; putative tail fiber protein E443E (GAG→GAA)
1602663 1430379 SNP C→A Rac prophage; putative tail fiber protein T444K (ACA→AAA)
1602664 1430380 SNP A→T Rac prophage; putative tail fiber protein T444T (ACA→ACT)
1602665 1430381 SNP G→T Rac prophage; putative tail fiber protein A445S (GCA→TCA)
1602666 1430383 SNP A→G Rac prophage; putative tail fiber protein A445A (GCA→GCG)
1602667 1430386 SNP T→A Rac prophage; putative tail fiber protein A446A (GCT→GCA)
1602668 1430392 SNP G→T Rac prophage; putative tail fiber protein R448R (CGG→CGT)
1602669 1430398 SNP G→A Rac prophage; putative tail fiber protein E450E (GAG→GAA)
1602670 1430404 SNP T→A Rac prophage; putative tail fiber protein I452I (ATT→ATA)
1602671 1430407 SNP A→T Rac prophage; putative tail fiber protein A453A (GCA→GCT)
1602672 1430410 SNP C→A Rac prophage; putative tail fiber protein S454S (TCC→TCA)
1602673 1430413 SNP C→T Rac prophage; putative tail fiber protein A455A (GCC→GCT)
1602674 1430416 SNP G→C Rac prophage; putative tail fiber protein V456V (GTG→GTC)
1602678 1635974 SNP T→G pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin pseudogene (394/528 nt)
1602679 1636068 SNP T→C pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin pseudogene (300/528 nt)
1602680 1636074 SNP C→T pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin pseudogene (294/528 nt)
1602681 1636128 SNP C→T pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin pseudogene (240/528 nt)
1602682 1636145 SNP T→C pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin pseudogene (223/528 nt)
1602683 1636173 SNP T→C pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin pseudogene (195/528 nt)
1602684 1636382 SNP C→A pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin/uncharacterized protein, Qin prophage intergenic (‑15/‑374)
1602685 1636455 SNP G→A pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin/uncharacterized protein, Qin prophage intergenic (‑88/‑301)
1602686 1636484 SNP C→T pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin/uncharacterized protein, Qin prophage intergenic (‑117/‑272)
1602687 1636503 SNP T→C pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin/uncharacterized protein, Qin prophage intergenic (‑136/‑253)
1602688 1636893 SNP C→T uncharacterized protein, Qin prophage R46R (CGC→CGT)

Starting Strain Mutations

Mut ID Position Mutation Type Sequence Change Gene Function Product GO Process GO Component Details