Frequency Filtering Thresholds

Minimum Cutoff:       Maximum Cutoff:

Ignored Genes

Enter gene(s) separated by ',' ex: tpoB,folD

Ignored Mutations

Mut ID Position Mutation Type Sequence Change Gene Function Product GO Process GO Component Details
481286 257908 DEL Δ776 bp [crl]
564207 3560455 INS +G pseudogene, DNA-binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon/pseudogene, DNA-binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon intergenic (‑2/+1)
566843 2173363 DEL Δ2 bp pseudogene, galactitol-specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol-specific enzyme IIC/pseudogene, galactitol-specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol-specific enzyme IIC intergenic (‑1/+1)
612037 1299499 DEL Δ1,199 bp UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein intergenic (+254/‑485)
644028 4296381 INS +GC glutamate/aspartate:proton symporter/Sel1 family TPR-like repeat protein intergenic (+587/+55)
673244 1979486 MOB IS5 (+) +4 bp IS1 repressor TnpA/universal stress protein intergenic (‑271/‑264)
770909 2132787 SNP A→C putative glycosyl transferase I204S (ATC→AGC)
1102505 1978503 DEL Δ776 bp insB1,insA
1102506 3815859 DEL Δ82 bp [rph],[rph]
1112478 1293032 MOB IS1 (–) +8 bp global DNA-binding transcriptional dual regulator H-NS/thymidine kinase/deoxyuridine kinase intergenic (‑110/‑488)
1112479 4001645 DEL Δ5 bp magnesium/nickel/cobalt transporter coding (220‑224/951 nt)
1112480 4184543 SNP C→A RNA polymerase, beta subunit P1100Q (CCG→CAG)

Starting Strain Mutations

Mut ID Position Mutation Type Sequence Change Gene Function Product GO Process GO Component Details