Frequency Filtering Thresholds

Minimum Cutoff:       Maximum Cutoff:

Ignored Genes

Enter gene(s) separated by ',' ex: tpoB,folD

Ignored Mutations

Mut ID Position Mutation Type Sequence Change Gene Function Product GO Process GO Component Details
1858471 179484 SNP T→C
CJ019_00182
hypothetical protein C316R (TGC→CGC)
1858472 2856886 SNP T→G
hdfR_4
HTH-type transcriptional regulator HdfR S297A (TCG→GCG)
1858473 4257352 INS +GCGGCCGC
CJ019_03991, CJ019_03994
putative ABC transporter ATP-binding protein/hypothetical protein intergenic (‑281/+7)
1858483 365722 SNP A→C
stcD_1, CJ019_00339
putative N-methylproline demethylase/hypothetical protein intergenic (+92/‑87)
1858485 426038 SNP A→C
rssB_2, glcB
Regulator of RpoS/Malate synthase G intergenic (+13/+34)
1858487 444535 SNP A→C
hdfR_1
HTH-type transcriptional regulator HdfR L130V (TTG→GTG)
1858488 478896 SNP T→G
apaH_1
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical D30A (GAC→GCC)
1858492 690144 SNP A→G
bauC, PP_RS08750
Putative 3-oxopropanoate dehydrogenase/tRNA-Val intergenic (+21/‑2438)
1858494 924303 SNP T→G
CJ019_00881
hypothetical protein D4790A (GAC→GCC)
1858495 930475 SNP T→G
CJ019_00881
hypothetical protein T2733P (ACC→CCC)
1858498 1092469 SNP A→C
kdsD
Arabinose 5-phosphate isomerase KdsD V50G (GTC→GGC)
1858499 1123238 SNP C→A
gcvH_1, CJ019_01062
Glycine cleavage system H protein/hypothetical protein intergenic (‑240/+64)
1858500 1138494 SNP T→G
pigA_1, hemR
Heme oxygenase PigA/Hemin receptor intergenic (‑108/+33)
1858501 1157983 SNP A→C
hexR_1
HTH-type transcriptional regulator HexR S162A (TCG→GCG)
1858504 1313950 SNP T→G
CJ019_01235
hypothetical protein R612R (AGG→CGG)
1858505 1339139 SNP T→G
udh
Uronate dehydrogenase *269C (TGA→TGC)
1858506 1348419 SNP T→G
CJ019_01261
hypothetical protein D4A (GAC→GCC)
1858507 1388322 SNP T→G
ruvB_1
Holliday junction ATP-dependent DNA helicaseRuvB L336V (TTG→GTG)
1858508 1468051 SNP A→C
algD, yaaA
GDP-mannose 6-dehydrogenase/Peroxide stress resistance protein YaaA intergenic (‑777/+24)
1858510 1522272 SNP A→C
ftsZ
Cell division protein FtsZ Q80P (CAG→CCG)
1858511 1523476 SNP A→C
lpxC
UDP-3-O-acyl-N-acetylglucosamine deacetylase D45A (GAC→GCC)
1858512 1528308 SNP A→C
argJ
Arginine biosynthesis bifunctional protein ArgJ P87P (CCA→CCC)
1858514 1544643 SNP T→G
pykA
Pyruvate kinase II Q412P (CAG→CCG)
1858516 1584539 SNP A→C
rhaS_1
HTH-type transcriptional activator RhaS G137G (GGT→GGG)
1858517 1630540 SNP A→C
czcS
Sensor protein CzcS L419R (CTG→CGG)
1858518 1670685 SNP A→C
thrC_2, CJ019_01569
Threonine synthase/hypothetical protein intergenic (+22/‑109)
1858519 1670690 SNP A→C
thrC_2, CJ019_01569
Threonine synthase/hypothetical protein intergenic (+27/‑104)
1858521 1718463 SNP T→G
CJ019_01614
hypothetical protein Q65P (CAG→CCG)
1858522 1721870 SNP A→C
CJ019_01617
hypothetical protein V98G (GTC→GGC)
1858524 1791678 SNP T→G
lpxB
Lipid-A-disaccharide synthase L182R (CTG→CGG)
1858525 1791684 SNP T→G
lpxB
Lipid-A-disaccharide synthase L184R (CTG→CGG)
1858527 1834917 SNP T→G
ldhA
D-lactate dehydrogenase T35P (ACC→CCC)
1858532 2085482 SNP C→G
deaD, ygiD
ATP-dependent RNA helicase DeaD/4,5-DOPA dioxygenase extradiol intergenic (+71/+20)
1858534 2094808 SNP A→C
CJ019_01995
hypothetical protein L186R (CTG→CGG)
1858535 2094817 SNP T→G
CJ019_01995
hypothetical protein Q183P (CAG→CCG)
1858537 2131359 SNP T→G
yadG
putative ABC transporter ATP-binding proteinYadG R135R (CGT→CGG)
1858538 2299276 SNP T→G
CJ019_02179
hypothetical protein N113T (AAC→ACC)
1858539 2358743 SNP T→G
CJ019_02230
hypothetical protein L41R (CTG→CGG)
1858541 2379994 SNP T→G
nrtA
Nitrate/nitrite binding protein NrtA Q56P (CAG→CCG)
1858544 2569872 SNP A→C
acoR_3
Acetoin catabolism regulatory protein L518R (CTG→CGG)
1858545 2770096 SNP A→C
CJ019_02613
hypothetical protein W156G (TGG→GGG)
1858547 2965146 SNP T→G
CJ019_02796, kstD_1
hypothetical protein/3-oxosteroid 1-dehydrogenase intergenic (+37/+72)
1858548 3204513 SNP G→C
CJ019_03009
hypothetical protein E165Q (GAA→CAA)
1858551 3255897 SNP A→C
pnuC, mcpP
Nicotinamide riboside transporter PnuC/Methyl-accepting chemotaxis protein McpP intergenic (‑152/+72)
1858552 3267810 SNP T→G
eamA
putative amino-acid metabolite efflux pump L171V (TTG→GTG)
1858553 3300105 SNP A→C
glaR
HTH-type transcriptional repressor GlaR L184R (CTC→CGC)
1858554 3312451 SNP A→C
cynR_3
HTH-type transcriptional regulator CynR L251R (CTG→CGG)
1858555 3312455 SNP A→C
cynR_3
HTH-type transcriptional regulator CynR S250A (TCG→GCG)
1858557 3389709 SNP T→G
yfdE
Acetyl-CoA:oxalate CoA-transferase L121R (CTG→CGG)
1858559 3465424 SNP T→G
fcuA_1
Ferrichrome receptor FcuA A41A (GCA→GCC)
1858561 3491319 SNP A→C
CJ019_03306, CJ019_03307
hypothetical protein/hypothetical protein intergenic (‑681/+40)
1858564 3626095 SNP T→G
hcf136_3
Ycf48-like protein G170G (GGT→GGG)
1858566 3761329 SNP A→C
CJ019_03574
hypothetical protein E96A (GAG→GCG)
1858568 3912334 SNP A→C
mexB_2
Multidrug resistance protein MexB E824A (GAG→GCG)
1858570 3944425 SNP T→G
CJ019_03729
hypothetical protein E86A (GAG→GCG)
1858572 3969760 SNP A→C
CJ019_03750
putative protein A251A (GCT→GCG)
1858573 3974886 SNP A→C
CJ019_03752
hypothetical protein V154G (GTC→GGC)
1858575 3986621 SNP A→C
CJ019_03763
hypothetical protein D31E (GAT→GAG) ‡
1858576 3986622 SNP T→G
CJ019_03763
hypothetical protein D31A (GAT→GCT) ‡
1858577 4029454 SNP A→C
mcpU_3
Methyl-accepting chemotaxis protein McpU D287A (GAC→GCC)
1858580 4135592 SNP A→C
tgnC
(Z)-2-((N-methylformamido)methylene)-5-hydroxybu tyrolactone dehydrogenase N27T (AAC→ACC)
1858581 4135607 SNP A→C
tgnC
(Z)-2-((N-methylformamido)methylene)-5-hydroxybu tyrolactone dehydrogenase Q32P (CAG→CCG)
1858582 4135612 SNP T→G
tgnC
(Z)-2-((N-methylformamido)methylene)-5-hydroxybu tyrolactone dehydrogenase W34G (TGG→GGG)
1858584 4245134 SNP A→C
CJ019_03982
Crotonyl-CoA hydratase L182V (TTG→GTG)
1858585 4245145 SNP A→C
CJ019_03982
Crotonyl-CoA hydratase L178R (CTG→CGG)
1858586 4257351 INS +CGCGGCCG
CJ019_03991, CJ019_03994
putative ABC transporter ATP-binding protein/hypothetical protein intergenic (‑280/+8)
1858587 4277043 SNP T→G
hbd
3-hydroxybutyryl-CoA dehydrogenase G278G (GGT→GGG)
1858592 4500221 SNP A→C
cysG_1
Siroheme synthase G58G (GGT→GGG)
1858593 4500241 SNP A→C
cysG_1
Siroheme synthase L52V (TTG→GTG)
1858594 4681221 SNP A→C
yejF
putative ABC transporter ATP-binding proteinYejF Q162P (CAG→CCG)
1858595 4845620 SNP T→G
apt, recR
Adenine phosphoribosyltransferase/Recombination protein RecR intergenic (+47/+72)
1858596 4874709 SNP A→C
CJ019_04568, uacT_1
hypothetical protein/Uric acid transporter UacT intergenic (+13/‑174)
1858597 4880375 SNP T→G
CJ019_04574
hypothetical protein E92A (GAG→GCG)
1858598 4894035 SNP T→G
lrpC, pucI_2
HTH-type transcriptional regulator LrpC/putative allantoin permease intergenic (+31/‑467)
1858601 5097064 SNP C→G
CJ019_04792, CJ019_04793
Putative pterin-4-alpha-carbinolaminedehydratase/hypothetical protein intergenic (+28/‑162)
1858603 5252157 SNP T→G
fabV
Enoyl-[acyl-carrier-protein] reductase [NADH] D323A (GAC→GCC)
1858604 5262927 SNP T→G
uacT_2, radA
Uric acid transporter UacT/DNA repair protein RadA intergenic (+27/+9)
1858608 5684640 SNP T→G
CJ019_05336
hypothetical protein P120P (CCT→CCG)
1858615 5974074 SNP A→C
sasA_19
Adaptive-response sensory-kinase SasA Q688P (CAG→CCG)
1858616 6001307 SNP A→C
mdtK
Multidrug resistance protein MdtK S313R (AGC→CGC)
1858617 6020335 SNP T→G
ycaD_4
putative MFS-type transporter YcaD S60R (AGC→CGC)
1858618 6020340 SNP A→C
ycaD_4
putative MFS-type transporter YcaD L58R (CTG→CGG)
1858621 6084764 SNP A→C
paiB
Protease synthase and sporulation protein PAI 2 N178T (AAC→ACC)
1858625 336468 SNP T→G
CJ019_00309
hypothetical protein K9N (AAA→AAC)
1858626 382479 SNP T→G
soxD
Sarcosine oxidase subunit delta L12R (CTG→CGG)
1858627 399292 SNP A→C
CJ019_00365, aceF
hypothetical protein/Dihydrolipoyllysine-residue acetyltransferasecomponent of pyruvate dehydrogenase complex intergenic (‑186/+122)
1858636 570448 SNP A→C
fdoG_2
Formate dehydrogenase-O major subunit D599A (GAC→GCC)
1858637 570451 SNP T→G
fdoG_2
Formate dehydrogenase-O major subunit V600G (GTG→GGG)
1858638 656905 SNP A→C
yfhM
Alpha-2-macroglobulin T241P (ACG→CCG)
1858639 797531 SNP A→C
CJ019_00762, CJ019_00763
hypothetical protein/hypothetical protein intergenic (+77/+17)
1858641 955841 SNP T→G
phnD1
putative ABC transporter phosphite bindingprotein PhnD1 L84R (CTG→CGG)
1858642 1016791 SNP A→C
dppA_1, oprD_5
Periplasmic dipeptide transport protein/Porin D intergenic (‑53/+26)
1858649 1313943 SNP A→C
CJ019_01235
hypothetical protein L614R (CTG→CGG)
1858652 1523480 SNP T→G
lpxC
UDP-3-O-acyl-N-acetylglucosamine deacetylase P46P (CCT→CCG)
1858653 1605593 SNP A→C
ung
Uracil-DNA glycosylase S112R (AGC→CGC)
1858654 1718476 SNP T→G
CJ019_01614
hypothetical protein T61P (ACC→CCC)
1858655 1729011 SNP T→G
csdA
Cysteine desulfurase CsdA Q190P (CAG→CCG)
1858660 2491272 SNP A→C
iutA
Ferric aerobactin receptor H33P (CAC→CCC)
1858663 2788018 SNP T→G
CJ019_02634, puuB_1
hypothetical protein/Gamma-glutamylputrescine oxidoreductase intergenic (+69/+43)
1858664 2847839 SNP T→A
CJ019_02703
hypothetical protein N183K (AAT→AAA)
1858667 3065799 SNP T→G
rcsC_6
Sensor histidine kinase RcsC F150V (TTT→GTT)
1858670 3244498 SNP A→C
ureF
Urease accessory protein UreF E94A (GAG→GCG)
1858671 3290008 SNP T→G
CJ019_03093, CJ019_03094
hypothetical protein/hypothetical protein intergenic (‑110/‑42)
1858673 3413147 SNP T→G
lexA_2
LexA repressor D2A (GAC→GCC)
1858674 3436622 SNP A→C
CJ019_03261
hypothetical protein E775A (GAG→GCG)
1858679 3986622 SNP T→G
CJ019_03763
hypothetical protein D31A (GAT→GCT)
1858685 4342664 SNP T→G
tsdA
Thiosulfate dehydrogenase Q17P (CAG→CCG)
1858690 4654316 SNP A→C
nuoG
NADH-quinone oxidoreductase subunit G N522H (AAC→CAC)
1858691 4789585 SNP A→C
dat
Diaminobutyrate--2-oxoglutarateaminotransferase V230G (GTG→GGG)
1858694 5119340 SNP T→G
CJ019_04815
hypothetical protein G55G (GGT→GGG)
1858700 5358465 SNP T→G
folP
Dihydropteroate synthase E46A (GAG→GCG)
1858704 5927532 SNP A→C
PP_RS08755, ygfA
tRNA-Asp/5-formyltetrahydrofolate cyclo-ligase intergenic (+111/‑104)
1858707 6038652 SNP A→C
puuD_3
Gamma-glutamyl-gamma-aminobutyrate hydrolasePuuD L39V (TTG→GTG)
1858722 336483 SNP A→T
CJ019_00309
hypothetical protein P4P (CCT→CCA)
1858723 339836 SNP T→G
CJ019_00314
hypothetical protein S354R (AGC→CGC)
1858726 478881 SNP A→C
apaH_1
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical V35G (GTC→GGC)
1858733 1047512 SNP A→C
CJ019_00985, CJ019_00986
hypothetical protein/hypothetical protein intergenic (‑104/+38)
1858734 1052536 SNP T→G
argO
Arginine exporter protein ArgO S90R (AGC→CGC)
1858736 1063986 SNP T→G
CJ019_01001
hypothetical protein D151A (GAC→GCC)
1858738 1084279 SNP A→C
sodB_2
Superoxide dismutase [Mn/Fe] N73T (AAC→ACC)
1858740 1246491 SNP T→G
rnfA, metG
Na( )-translocating ferredoxin:NAD( )oxidoreductase complex subunit A/Methionine--tRNA ligase intergenic (‑84/+23)
1858741 1308712 SNP A→C
CJ019_01226
hypothetical protein T32P (ACG→CCG)
1858747 1735713 SNP T→G
CJ019_01634
hypothetical protein D69A (GAC→GCC)
1858752 1834908 SNP T→G
ldhA
D-lactate dehydrogenase T38P (ACC→CCC)
1858754 1836360 SNP C→A
barA
Signal transduction histidine-protein kinaseBarA S497I (AGT→ATT)
1858756 1898174 SNP A→C
nasD
Nitrite reductase [NAD(P)H] K458T (AAG→ACG)
1858759 2318786 SNP A→C
yjcS
Putative alkyl/aryl-sulfatase YjcS G525G (GGT→GGG)
1858760 2708473 SNP T→G
CJ019_02558
hypothetical protein V44G (GTG→GGG)
1858762 2938227 SNP T→G
pqiB
Intermembrane transport protein PqiB R533R (CGT→CGG)
1858764 3312431 SNP T→G
cynR_3
HTH-type transcriptional regulator CynR T258P (ACG→CCG)
1858766 3440343 SNP A→C
CJ019_03266
hypothetical protein S18R (AGC→CGC)
1858769 3598388 SNP T→G
CJ019_03412
hypothetical protein L184R (CTT→CGT)
1858774 3944256 SNP T→G
CJ019_03729
hypothetical protein E142D (GAA→GAC)
1858777 4077164 SNP T→G
artJ_2
ABC transporter arginine-binding protein 1 L173R (CTG→CGG)
1858780 4287814 SNP T→G
CJ019_04021, gloA
hypothetical protein/Lactoylglutathione lyase intergenic (+119/‑106)
1858783 4500206 SNP A→C
cysG_1
Siroheme synthase R63R (CGT→CGG)
1858786 4688831 SNP T→G
yhaJ_2
HTH-type transcriptional regulator YhaJ L281R (CTG→CGG)
1858787 4747255 SNP T→G
macB
Macrolide export ATP-binding/permease proteinMacB S294A (TCG→GCG)
1858789 4880363 SNP A→C
CJ019_04574
hypothetical protein V96G (GTG→GGG)
1858791 5180021 SNP T→G
aceK
Isocitrate dehydrogenase kinase/phosphatase E136A (GAG→GCG)
1858792 5241188 SNP A→C
CJ019_04935
hypothetical protein F455V (TTC→GTC)
1858793 5247847 SNP A→C
CJ019_04943
hypothetical protein L260R (CTG→CGG)
1858795 5301325 SNP A→C
recC, PP_RS08750
RecBCD enzyme subunit RecC/tRNA-Val intergenic (‑106/+3467)
1858798 5393134 SNP G→C
CJ019_05075
hypothetical protein A434P (GCC→CCC)
1858801 5684652 SNP G→C
CJ019_05336
hypothetical protein K124N (AAG→AAC)
1858802 5688615 SNP T→G
pyrC'
Dihydroorotase-like protein R228R (CGT→CGG)
1858803 5688637 SNP A→C
pyrC'
Dihydroorotase-like protein S236R (AGC→CGC)
1858804 5688645 SNP T→G
pyrC'
Dihydroorotase-like protein R238R (CGT→CGG)
1858807 6014847 SNP A→C
puuB_8
Gamma-glutamylputrescine oxidoreductase K133N (AAA→AAC)
1858808 6020344 SNP T→G
ycaD_4
putative MFS-type transporter YcaD S57R (AGC→CGC)
1858817 1835872 SNP T→C
barA
Signal transduction histidine-protein kinaseBarA S660G (AGC→GGC)
1858822 96480 SNP T→G
cynT, CJ019_00104
Carbonic anhydrase 1/hypothetical protein intergenic (+121/‑72)
1858823 150804 SNP A→C
CJ019_00156
hypothetical protein W7G (TGG→GGG)
1858826 627220 SNP T→G
acoR_1
Acetoin catabolism regulatory protein L159R (CTG→CGG)
1858827 627228 SNP T→G
acoR_1
Acetoin catabolism regulatory protein S162A (TCG→GCG)
1858841 2385345 SNP T→G
CJ019_02252
hypothetical protein L273V (TTG→GTG)
1858846 4029463 SNP A→C
mcpU_3
Methyl-accepting chemotaxis protein McpU D290A (GAC→GCC)
1858854 4801948 SNP G→T
CJ019_04509, dsbD_2
hypothetical protein/Thiol:disulfide interchange protein DsbD intergenic (‑268/‑463)
1858858 5094168 SNP A→C
tyrR_2
Transcriptional regulatory protein TyrR F476C (TTT→TGT)
1858867 1836147 SNP A→C
barA
Signal transduction histidine-protein kinaseBarA V568G (GTG→GGG)
1858868 233250 SNP A→C
hemX
Protein HemX K157N (AAA→AAC)
1858869 381772 SNP T→G
soxB
Sarcosine oxidase subunit beta L198R (CTG→CGG)
1858872 624906 SNP A→C
potE, adh_1
Putrescine transporter PotE/Aldehyde dehydrogenase intergenic (‑164/+64)
1858876 1188694 SNP T→G
CJ019_01117
hypothetical protein L43R (CTG→CGG)
1858883 1472154 SNP T→G
moaC
Cyclic pyranopterin monophosphate synthase V55G (GTG→GGG)
1858885 1585043 SNP T→G
rhaS_1, CJ019_01492
HTH-type transcriptional activator RhaS/hypothetical protein intergenic (‑94/‑109)
1858886 1670696 SNP A→C
thrC_2, CJ019_01569
Threonine synthase/hypothetical protein intergenic (+33/‑98)
1858887 1674731 SNP A→C
recJ
Single-stranded-DNA-specific exonuclease RecJ D65A (GAC→GCC)
1858889 1720951 SNP T→G
plsB
Glycerol-3-phosphate acyltransferase D90A (GAC→GCC)
1858892 1861266 SNP A→C
cbiA
Cobyrinate a,c-diamide synthase A108A (GCA→GCC)
1858894 1892407 SNP A→C
PP_RS08755, napA
tRNA-Asp/Periplasmic nitrate reductase intergenic (+421/‑99)
1858898 2134732 SNP T→G
comEC
ComE operon protein 3 L471V (TTG→GTG)
1858904 2758087 SNP T→G
CJ019_02600, CJ019_02602
hypothetical protein/hypothetical protein intergenic (‑113/+225)
1858908 3044626 SNP A→C
rcsC_5
Sensor histidine kinase RcsC E90A (GAG→GCG)
1858909 3047211 SNP T→G
CJ019_02862
hypothetical protein K124N (AAA→AAC)
1858914 3308725 SNP A→C
CJ019_03110
hypothetical protein L164R (CTG→CGG)
1858918 3491323 SNP T→G
CJ019_03306, CJ019_03307
hypothetical protein/hypothetical protein intergenic (‑685/+36)
1858924 3875885 SNP A→C
ttgI_2
Toluene efflux pump outer membrane protein TtgI N300T (AAC→ACC)
1858926 3977481 SNP A→C
ilvE
Branched-chain-amino-acid aminotransferase T284P (ACC→CCC)
1858932 4500213 SNP A→C
cysG_1
Siroheme synthase L61R (CTG→CGG)
1858941 5247863 SNP T→G
CJ019_04943
hypothetical protein R255R (AGG→CGG)
1858950 5559702 SNP A→C
mutL_2
DNA mismatch repair protein MutL V146G (GTC→GGC)
1858953 5656106 SNP A→C
mltA
Membrane-bound lytic murein transglycosylase A K68T (AAG→ACG)
1858954 5688625 SNP A→C
pyrC'
Dihydroorotase-like protein S232R (AGC→CGC)
1858955 5688634 SNP A→C
pyrC'
Dihydroorotase-like protein T235P (ACC→CCC)
1858956 5717363 SNP A→C
opgH
Glucans biosynthesis glucosyltransferase H V753G (GTG→GGG)
1858957 5773403 SNP T→G
nhaP2_2
K( )/H( ) antiporter NhaP2 F334V (TTC→GTC)
1858965 690150 SNP T→G
bauC, PP_RS08750
Putative 3-oxopropanoate dehydrogenase/tRNA-Val intergenic (+27/‑2432)
1858967 4612646 INS (A)10→11
CJ019_04358, rhsC
hypothetical protein/Putative deoxyribonuclease RhsC intergenic (+1098/‑681)
1858971 740674 SNP T→G
CJ019_00704
hypothetical protein L38R (CTG→CGG)
1858972 763776 SNP T→G
thrC_1
Threonine synthase V137G (GTC→GGC)
1858974 868330 SNP T→G
loiP, mneA
Metalloprotease LoiP/Putative manganese exporter intergenic (+19/+27)
1858982 1892414 SNP A→C
PP_RS08755, napA
tRNA-Asp/Periplasmic nitrate reductase intergenic (+428/‑92)
1858984 2391010 SNP T→G
bvgS
Virulence sensor protein BvgS E566D (GAA→GAC)
1858988 2708478 SNP T→G
CJ019_02558
hypothetical protein C46G (TGC→GGC)
1858998 3308718 SNP A→C
CJ019_03110
hypothetical protein R166R (CGT→CGG)
1859010 4760742 SNP A→C
vanB
vanillate O-demethylase oxidoreductase H41P (CAC→CCC)
2132653 44301 DEL (T)9→8
oprD_1, czcR_2
Porin D/Transcriptional activator protein CzcR intergenic (+132/‑359)
2132654 120983 DEL (T)9→8
polA, engB
DNA polymerase I/putative GTP-binding protein EngB intergenic (+280/+92)
2132655 1974160 SNP T→G
rpsA, ihfB
30S ribosomal protein S1/Integration host factor subunit beta intergenic (+42/‑258)
2132656 3440348 SNP T→G
CJ019_03266
hypothetical protein A19A (GCT→GCG)
2132657 4927839 SNP T→G
srp54
Signal recognition particle 54 kDa protein Q192P (CAG→CCG)
2132658 5074235 SNP A→G
csrA2, CJ019_04774
Translational regulator CsrA2/Aspartate kinase intergenic (‑132/+36)
2132659 5301319 SNP T→C
recC, PP_RS08750
RecBCD enzyme subunit RecC/tRNA-Val intergenic (‑100/+3473)
2132660 5756060 DEL (A)6→5
CJ019_05400
hypothetical protein coding (781/834 nt)
2132661 641297 SNP A→C
acoR_2, accC
Acetoin catabolism regulatory protein/Biotin carboxylase intergenic (+16/+75)
2132662 2858531 SNP C→G
nicP_5, galA
Porin-like protein NicP/Gallate dioxygenase intergenic (‑92/+40)
2132663 3134567 SNP T→G
CJ019_02952
hypothetical protein L143V (TTG→GTG)
2132664 3359601 AMP 17,000 bp x 2
CJ019_03160,CJ019_03161,CJ019_03162,CJ019_03163,csoR,CJ019_03165,PP_RS08750,PP_RS08760,CJ019_03166,CJ019_03167,CJ019_03168,dgkA_2,mdoB_2,CJ019_03171,CJ019_03172,CJ019_03174,CJ019_03175,CJ019_03176,CJ019_03177,xerC_3,smc_1,CJ019_03180,CJ019_03181,CJ019_03182,CJ019_03183,CJ019_03184
CJ019_03160,CJ019_03161,CJ019_03162,CJ019_03163,csoR,CJ019_03165,PP_RS08750,PP_RS08760,CJ019_03166,CJ019_03167,CJ019_03168,dgkA_2,mdoB_2,CJ019_03171,CJ019_03172,CJ019_03174,CJ019_03175,CJ019_03176,CJ019_03177,xerC_3,smc_1,CJ019_03180,CJ019_03181,CJ019_03182,CJ019_03183,[CJ019_03184] duplication
2132665 4044898 SNP T→G
oprB_3, argE_1
Porin B/Acetylornithine deacetylase intergenic (+17/+26)
2132666 5498353 SNP T→G
CJ019_05176
hypothetical protein L178R (CTG→CGG)
2132667 5537803 SNP T→G
CJ019_03622
IS110 family transposase ISPpu9 K51N (AAA→AAC)
2132668 6177051 SNP T→G
mnmG
tRNA uridine 5-carboxymethylaminomethylmodification enzyme MnmG K619N (AAA→AAC)
2132670 1304838 SNP T→C
CJ019_01223, rapA
putative signaling protein/RNA polymerase-associated protein RapA intergenic (‑253/+25)
2132671 1618264 SNP A→C
sdhE, nadB
FAD assembly factor SdhE/L-aspartate oxidase intergenic (+473/+26)
2132672 1721889 SNP A→C
CJ019_01617
hypothetical protein C92G (TGC→GGC)
2132673 2234395 SNP T→C
gltX, PP_RS08750
Glutamate--tRNA ligase/tRNA-Val intergenic (+85/‑196)
2132674 3571493 SNP A→T
CJ019_03384, CJ019_03385
hypothetical protein/hypothetical protein intergenic (+113/+607)
2132675 5545567 SNP A→C
CJ019_05222, CJ019_05223
hypothetical protein/hypothetical protein intergenic (+583/+78)
2132676 6037854 SNP C→G
CJ019_05655
hypothetical protein R9P (CGC→CCC)
2132679 112640 INS +GT
katE, CJ019_00120
Catalase HPII/hypothetical protein intergenic (+17/+44)
2132680 268198 SNP T→G
dmoA_1
Dimethyl-sulfide monooxygenase Q266P (CAG→CCG)
2132681 4759486 SUB 2 bp→GT
fpvA_3, vanA
Ferripyoverdine receptor/vanillate demethylase A intergenic (+84/‑54)
2132682 1806734 INS (AAGAGC)1→2
yeiG
S-formylglutathione hydrolase YeiG coding (33/855 nt)
2132683 3359601 AMP 17,100 bp x 2
CJ019_03160,CJ019_03161,CJ019_03162,CJ019_03163,csoR,CJ019_03165,PP_RS08750,PP_RS08760,CJ019_03166,CJ019_03167,CJ019_03168,dgkA_2,mdoB_2,CJ019_03171,CJ019_03172,CJ019_03174,CJ019_03175,CJ019_03176,CJ019_03177,xerC_3,smc_1,CJ019_03180,CJ019_03181,CJ019_03182,CJ019_03183,CJ019_03184
CJ019_03160,CJ019_03161,CJ019_03162,CJ019_03163,csoR,CJ019_03165,PP_RS08750,PP_RS08760,CJ019_03166,CJ019_03167,CJ019_03168,dgkA_2,mdoB_2,CJ019_03171,CJ019_03172,CJ019_03174,CJ019_03175,CJ019_03176,CJ019_03177,xerC_3,smc_1,CJ019_03180,CJ019_03181,CJ019_03182,CJ019_03183,[CJ019_03184] duplication
2132684 3637133 SNP G→C
ssuB_2
Aliphatic sulfonates import ATP-binding proteinSsuB A277G (GCC→GGC)
2132685 4919862 SNP A→G
motB_1
Motility protein B G43G (GGT→GGC)
2132686 4919883 SNP G→C
motB_1
Motility protein B S36S (TCC→TCG)
2132687 4919912 SNP G→A
motB_1
Motility protein B L27L (CTG→TTG)
2132688 4919915 SUB 2 bp→GG
motB_1
Motility protein B coding (75‑76/858 nt)
2132689 4919925 SNP G→A
motB_1
Motility protein B D22D (GAC→GAT)
2132690 4919931 SNP G→A
motB_1
Motility protein B Y20Y (TAC→TAT)
2132691 4919934 SNP C→G
motB_1
Motility protein B S19S (TCG→TCC)
2132692 4919937 SNP C→A
motB_1
Motility protein B V18V (GTG→GTT)
2132693 4919949 SNP C→T
motB_1
Motility protein B E14E (GAG→GAA)
2132694 4919958 SNP T→C
motB_1
Motility protein B E11E (GAA→GAG)
2132695 4923000 SNP T→C
CJ019_04618
hypothetical protein E379E (GAA→GAG)
2132696 4923027 SNP C→G
CJ019_04618
hypothetical protein L370L (CTG→CTC)
2132697 4923030 SNP G→A
CJ019_04618
hypothetical protein R369R (CGC→CGT)
2132698 4923036 SNP G→C
CJ019_04618
hypothetical protein T367T (ACC→ACG)
2132699 4923039 SNP G→A
CJ019_04618
hypothetical protein D366D (GAC→GAT)
2132700 4923042 SNP G→C
CJ019_04618
hypothetical protein V365V (GTC→GTG)
2132701 4923045 SNP G→C
CJ019_04618
hypothetical protein R364R (CGC→CGG)
2132702 4923057 SNP T→C
CJ019_04618
hypothetical protein E360E (GAA→GAG)
2132703 4923063 SNP T→C
CJ019_04618
hypothetical protein E358E (GAA→GAG)
2132704 5502543 SNP A→C
CJ019_05179
hypothetical protein Q32P (CAG→CCG)
2132705 6096658 SNP G→A
CJ019_05710
hypothetical protein G279S (GGT→AGT)
2132706 2294625 SNP G→C
sbcD, CJ019_02175
Nuclease SbcCD subunit D/hypothetical protein intergenic (‑212/‑119)
2132707 3708077 SNP T→G
pcaF_2
Beta-ketoadipyl-CoA thiolase H279P (CAT→CCT)
2132709 1188687 SNP A→C
CJ019_01117
hypothetical protein S41R (AGC→CGC)
2132710 2357157 SNP A→C
CJ019_02228, lysA_1
hypothetical protein/Diaminopimelate decarboxylase intergenic (‑275/+109)
2132711 5723166 SNP A→C
pip, CJ019_05371
Proline iminopeptidase/hypothetical protein intergenic (‑145/+25)
2132712 3459905 SNP G→C
CJ019_03284
hypothetical protein A18G (GCC→GGC)
2132713 3459898 SNP T→G
CJ019_03284
hypothetical protein A20A (GCA→GCC)
2132714 2047184 SNP T→G
CJ019_01943
hypothetical protein S168R (AGC→CGC)
2132715 4495409 SNP C→G
dsrE
Putative sulfurtransferase DsrE R11G (CGG→GGG)
2132717 791714 SNP T→G
fklB_1, CJ019_00755
FKBP-type 22 kDa peptidyl-prolyl cis-transisomerase/hypothetical protein intergenic (+19/+8)
2132718 3359601 AMP 6,000 bp x 2
CJ019_03160,CJ019_03161,CJ019_03162,CJ019_03163,csoR,PP_RS08750,PP_RS08760,CJ019_03165
CJ019_03160,CJ019_03161,CJ019_03162,CJ019_03163,csoR,PP_RS08750,PP_RS08760,[CJ019_03165] duplication
2132719 3366201 AMP 10,400 bp x 2
CJ019_03168,dgkA_2,mdoB_2,CJ019_03171,CJ019_03172,CJ019_03174,CJ019_03175,CJ019_03176,CJ019_03177,xerC_3,smc_1,CJ019_03180,CJ019_03181,CJ019_03182,CJ019_03183,CJ019_03184
[CJ019_03168],dgkA_2,mdoB_2,CJ019_03171,CJ019_03172,CJ019_03174,CJ019_03175,CJ019_03176,CJ019_03177,xerC_3,smc_1,CJ019_03180,CJ019_03181,CJ019_03182,CJ019_03183,[CJ019_03184] duplication
2132720 3746646 SNP A→C
clpC
ATP-dependent Clp protease ATP-binding subunitClpC D81E (GAT→GAG)
2132721 5115801 SNP A→C
CJ019_04811
hypothetical protein L306R (CTG→CGG)
2132722 5564063 SNP A→G
queG, CJ019_05240
Epoxyqueuosine reductase/hypothetical protein intergenic (+35/+106)
2132723 5684634 SNP A→C
CJ019_05336
hypothetical protein P118P (CCA→CCC)
2132724 759413 SNP T→G
mmuM_1, CJ019_00729
Homocysteine S-methyltransferase/L-methionine gamma-lyase intergenic (+22/‑146)
2132725 1740407 SNP T→G
CJ019_01643
hypothetical protein E53A (GAG→GCG)
2132726 2659801 SNP C→A
acnM, prpF
Aconitate hydratase A/2-methyl-aconitate isomerase intergenic (+18/‑36)
2132727 3360501 AMP 16,100 bp x 2
CJ019_03160,CJ019_03161,CJ019_03162,CJ019_03163,csoR,CJ019_03165,PP_RS08750,PP_RS08760,CJ019_03166,CJ019_03167,CJ019_03168,dgkA_2,mdoB_2,CJ019_03171,CJ019_03172,CJ019_03174,CJ019_03175,CJ019_03176,CJ019_03177,xerC_3,smc_1,CJ019_03180,CJ019_03181,CJ019_03182,CJ019_03183,CJ019_03184
[CJ019_03160],CJ019_03161,CJ019_03162,CJ019_03163,csoR,CJ019_03165,PP_RS08750,PP_RS08760,CJ019_03166,CJ019_03167,CJ019_03168,dgkA_2,mdoB_2,CJ019_03171,CJ019_03172,CJ019_03174,CJ019_03175,CJ019_03176,CJ019_03177,xerC_3,smc_1,CJ019_03180,CJ019_03181,CJ019_03182,CJ019_03183,[CJ019_03184] duplication
2132728 3436586 SNP T→G
CJ019_03261
hypothetical protein F763C (TTT→TGT)
2132729 4434252 SNP T→G
nicP_12, nicT_2
Porin-like protein NicP/Putative metabolite transport protein NicT intergenic (‑108/+30)
2132730 161267 SNP A→G
uctC_1, PP_RS08750
Acetyl-CoA:oxalate CoA-transferase/tRNA-Val intergenic (+14/‑7694)
2132733 3229202 SNP A→C
garD_1
Galactarate dehydratase (L-threo-forming) T414P (ACC→CCC)
2132734 5279516 SNP T→G
mcpS, ggt_2
Methyl-accepting chemotaxis protein McpS/Glutathione hydrolase proenzyme intergenic (+33/+90)
2132735 5502555 SNP T→G
CJ019_05179
hypothetical protein L36R (CTC→CGC)
2132737 791722 SNP T→G
CJ019_00755
hypothetical protein *82C (TGA→TGC)
2132738 3784663 SNP T→G
dmdC_4
3-methylmercaptopropionyl-CoA dehydrogenase D571A (GAC→GCC)
2132739 3784667 SNP T→G
dmdC_4
3-methylmercaptopropionyl-CoA dehydrogenase I570L (ATC→CTC)
2132740 4137520 SNP C→A
hsaB_3, CJ019_03896
Flavin-dependent monooxygenase, reductasesubunit HsaB/hypothetical protein intergenic (+28/‑95)
2132741 4137527 SNP T→G
hsaB_3, CJ019_03896
Flavin-dependent monooxygenase, reductasesubunit HsaB/hypothetical protein intergenic (+35/‑88)
2132742 6024488 SNP A→C
dppA_4
Periplasmic dipeptide transport protein K229T (AAG→ACG)

Starting Strain Mutations

Mut ID Position Mutation Type Sequence Change Gene Function Product GO Process GO Component Details