| 
                        
                     | 
                    1124550 | 
                    110660 | 
                    SNP | 
                    T→A | 
                    USA300HOU_RS00515  | 
                     | 
                    putative lipoprotein | 
                     | 
                     | 
                    I173I (ATT→ATA) | 
                
                
                
                    | 
                        
                     | 
                    1124595 | 
                    9710 | 
                    SNP | 
                    T→C | 
                    gyrA, nnrD  | 
                     | 
                    DNA gyrase subunit A/ADP-dependent (S)-NAD(P)H-hydrate dehydratase | 
                     | 
                     | 
                    intergenic (+15/+72) | 
                
                
                
                    | 
                        
                     | 
                    1124611 | 
                    2372413 | 
                    SNP | 
                    C→G | 
                    USA300TCH1516_02262, pbuG  | 
                     | 
                    hypothetical protein/Guanine/hypoxanthine permease PbuG | 
                     | 
                     | 
                    intergenic (+164/+28) | 
                
                
                
                    | 
                        
                     | 
                    1124630 | 
                    1744362 | 
                    SNP | 
                    G→A | 
                    apt  | 
                     | 
                    Adenine phosphoribosyltransferase | 
                     | 
                     | 
                    H104Y (CAC→TAC) | 
                
                
                
                    | 
                        
                     | 
                    1124647 | 
                    9716 | 
                    SNP | 
                    T→C | 
                    gyrA, nnrD  | 
                     | 
                    DNA gyrase subunit A/ADP-dependent (S)-NAD(P)H-hydrate dehydratase | 
                     | 
                     | 
                    intergenic (+21/+66) | 
                
                
                
                    | 
                        
                     | 
                    1124648 | 
                    9719 | 
                    SNP | 
                    G→A | 
                    gyrA, nnrD  | 
                     | 
                    DNA gyrase subunit A/ADP-dependent (S)-NAD(P)H-hydrate dehydratase | 
                     | 
                     | 
                    intergenic (+24/+63) | 
                
                
                
                    | 
                        
                     | 
                    1124709 | 
                    803539 | 
                    SNP | 
                    A→G | 
                    USA300HOU_RS03920, dtpT  | 
                     | 
                    Putative lipid kinase/Di-/tripeptide transporter | 
                     | 
                     | 
                    intergenic (‑239/+31) | 
                
                
                
                    | 
                        
                     | 
                    1124867 | 
                    2372419 | 
                    SNP | 
                    C→T | 
                    USA300TCH1516_02262, pbuG  | 
                     | 
                    hypothetical protein/Guanine/hypoxanthine permease PbuG | 
                     | 
                     | 
                    intergenic (+170/+22) | 
                
                
                
                    | 
                        
                     | 
                    1126452 | 
                    76969 | 
                    SNP | 
                    G→A | 
                    USA300HOU_RS00140, USA300HOU_RS00350  | 
                     | 
                    hypothetical protein/Monoacylglycerol lipase | 
                     | 
                     | 
                    intergenic (+509/‑107) | 
                
                
                
                    | 
                        
                     | 
                    1126456 | 
                    195286 | 
                    SNP | 
                    T→A | 
                    USA300HOU_RS00900, USA300HOU_RS00905  | 
                     | 
                    hypothetical protein/hypothetical protein | 
                     | 
                     | 
                    intergenic (‑97/‑82) | 
                
                
                
                    | 
                        
                     | 
                    1126458 | 
                    396540 | 
                    SNP | 
                    G→A | 
                    efeM  | 
                     | 
                    putative iron uptake system component EfeM | 
                     | 
                     | 
                    A208T (GCA→ACA) | 
                
                
                
                    | 
                        
                     | 
                    1126461 | 
                    607884 | 
                    SNP | 
                    G→A | 
                    dck  | 
                     | 
                    Deoxyadenosine/deoxycytidine kinase | 
                     | 
                     | 
                    R209* (CGA→TGA) | 
                
                
                
                    | 
                        
                     | 
                    1126462 | 
                    629681 | 
                    SNP | 
                    C→A | 
                    USA300HOU_RS02990  | 
                     | 
                    3-hexulose-6-phosphate synthase | 
                     | 
                     | 
                    L84I (CTA→ATA) | 
                
                
                
                    | 
                        
                     | 
                    1126463 | 
                    665392 | 
                    SNP | 
                    T→G | 
                    paiA_1  | 
                     | 
                    Spermidine/spermine N(1)-acetyltransferase | 
                     | 
                     | 
                    L79* (TTA→TGA) | 
                
                
                
                    | 
                        
                     | 
                    1126464 | 
                    707910 | 
                    SNP | 
                    A→G | 
                    znuC_1, ideR  | 
                     | 
                    High-affinity zinc uptake system ATP-binding protein ZnuC/Iron-dependent repressor IdeR | 
                     | 
                     | 
                    intergenic (‑1/‑121) | 
                
                
                
                    | 
                        
                     | 
                    1126472 | 
                    1233504 | 
                    SNP | 
                    T→A | 
                    prkC  | 
                     | 
                    Serine/threonine-protein kinase PrkC | 
                     | 
                     | 
                    V470D (GTT→GAT) | 
                
                
                
                    | 
                        
                     | 
                    1126475 | 
                    1440085 | 
                    SNP | 
                    G→T | 
                    cspA_2, USA300TCH1516_01338  | 
                     | 
                    Cold shock protein CspA/hypothetical protein | 
                     | 
                     | 
                    intergenic (‑45/+126) | 
                
                
                
                    | 
                        
                     | 
                    1126479 | 
                    1761889 | 
                    SNP | 
                    C→A | 
                    fpgS  | 
                     | 
                    Folylpolyglutamate synthase | 
                     | 
                     | 
                    D388Y (GAT→TAT) | 
                
                
                
                    | 
                        
                     | 
                    1126484 | 
                    1963768 | 
                    SNP | 
                    C→G | 
                    hemY  | 
                     | 
                    Protoporphyrinogen oxidase | 
                     | 
                     | 
                    V365L (GTA→CTA) | 
                
                
                
                    | 
                        
                     | 
                    1126491 | 
                    2352815 | 
                    SNP | 
                    G→A | 
                    rpsI  | 
                     | 
                    30S ribosomal protein S9 | 
                     | 
                     | 
                    A92V (GCA→GTA) | 
                
                
                
                    | 
                        
                     | 
                    1126492 | 
                    2454626 | 
                    SNP | 
                    A→T | 
                    lyrA  | 
                     | 
                    Lysostaphin resistance protein A | 
                     | 
                     | 
                    L48L (CTA→CTT) | 
                
                
                
                    | 
                        
                     | 
                    1126831 | 
                    1744476 | 
                    SNP | 
                    C→G | 
                    apt  | 
                     | 
                    Adenine phosphoribosyltransferase | 
                     | 
                     | 
                    V66L (GTA→CTA) |