Baym_M_2016: Manifold0-1gml-1mgml - Sample Meta Data
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Note: the reference genome BOP27 is a known variant of E. coli K12 MG1655 E. coli K12 MG1655.
| ALE, Flask, Isolate, Technical Replicate | Clonal or Population | ALE Sample Details | Base Media | Carbon Source(g/L) | Nitrogen Source(g/L) | Phosphorus Source(g/L) | Sulfur Source(g/L) | Calcium Source(g/L) | Supplement(g/L) | Temperature (Celsius) | Strain | Additional Strain Details | Taxonomy ID | Reference Genome |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A0 F0 I1 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I163 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I164 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I167 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I168 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I171 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I178 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I179 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I186 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I187 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I188 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I189 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F2 I162 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I165 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I166 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I169 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I170 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I172 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I173 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I174 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I175 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I176 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I177 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I180 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I181 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I182 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I183 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I184 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I185 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F3 I103 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F3 I105 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F3 I106 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F3 I108 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F3 I109 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F3 I110 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F3 I111 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F3 I112 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F3 I113 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F3 I114 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F3 I115 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F3 I116 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F3 I117 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F3 I118 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F3 I119 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F3 I120 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F3 I121 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F3 I145 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb |