Note: the reference genome BOP27 is a known variant of E. coli K12 MG1655 E. coli K12 MG1655.
ALE, Flask, Isolate, Technical Replicate | Clonal or Population | ALE Sample Details | Base Media | Carbon Source(g/L) | Nitrogen Source(g/L) | Phosphorus Source(g/L) | Sulfur Source(g/L) | Calcium Source(g/L) | Supplement(g/L) | Temperature (Celsius) | Strain | Additional Strain Details | Taxonomy ID | Reference Genome |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A0 F0 I1 R1 | clonal | The medium is mixing a ratio of HDA and MOPS-EZ with 400 mM of MeOH, HDA:MOPS = 100% | other | MeOH(400) | None | None | None | None | 37 | 679895 | BW25113 ∆rpiA::FRT ∆rpiB ∆nupG::PLlacO1::medh/tkt(Mb)/tal(Kp)/hps(Mb)/phi SS3(intergenic site)::PLlacO1::medh/hps(Bm)/phi, and then ∆pfkA ∆gapA::gapC with pFC139 | Illumina/ | /var/data/CP009273_1.gb | |
A1 F16 I0 R1 | population | The medium is mixing a ratio of HDA and MOPS-EZ with 400 mM of MeOH, HDA:MOPS = 100% | other | MeOH(400) | None | None | None | None | 37 | 679895 | BW25113 ∆rpiA::FRT ∆rpiB ∆nupG::PLlacO1::medh/tkt(Mb)/tal(Kp)/hps(Mb)/phi SS3(intergenic site)::PLlacO1::medh/hps(Bm)/phi, and then ∆pfkA ∆gapA::gapC with pFC139 | Illumina/ | /var/data/CP009273_1.gb | |
A1 F17 I0 R1 | population | The medium is mixing a ratio of HDA and MOPS-EZ with 400 mM of MeOH, HDA:MOPS = 100% | other | MeOH(400) | None | None | None | None | 37 | 679895 | BW25113 ∆rpiA::FRT ∆rpiB ∆nupG::PLlacO1::medh/tkt(Mb)/tal(Kp)/hps(Mb)/phi SS3(intergenic site)::PLlacO1::medh/hps(Bm)/phi, and then ∆pfkA ∆gapA::gapC with pFC139 | Illumina/ | /var/data/CP009273_1.gb | |
A1 F22 I0 R1 | population | The medium is mixing a ratio of HDA and MOPS-EZ with 400 mM of MeOH, HDA:MOPS = 100% | other | MeOH(400) | None | None | None | None | 37 | 679895 | BW25113 ∆rpiA::FRT ∆rpiB ∆nupG::PLlacO1::medh/tkt(Mb)/tal(Kp)/hps(Mb)/phi SS3(intergenic site)::PLlacO1::medh/hps(Bm)/phi, and then ∆pfkA ∆gapA::gapC with pFC139 | Illumina/ | /var/data/CP009273_1.gb | |
A1 F23 I0 R1 | population | The medium is mixing a ratio of HDA and MOPS-EZ with 400 mM of MeOH, HDA:MOPS = 100% | other | MeOH(400) | None | None | None | None | 37 | 679895 | BW25113 ∆rpiA::FRT ∆rpiB ∆nupG::PLlacO1::medh/tkt(Mb)/tal(Kp)/hps(Mb)/phi SS3(intergenic site)::PLlacO1::medh/hps(Bm)/phi, and then ∆pfkA ∆gapA::gapC with pFC139 | Illumina/ | /var/data/CP009273_1.gb | |
A1 F25 I0 R1 | population | The medium is mixing a ratio of HDA and MOPS-EZ with 400 mM of MeOH, HDA:MOPS = 100% | other | MeOH(400) | None | None | None | None | 37 | 679895 | BW25113 ∆rpiA::FRT ∆rpiB ∆nupG::PLlacO1::medh/tkt(Mb)/tal(Kp)/hps(Mb)/phi SS3(intergenic site)::PLlacO1::medh/hps(Bm)/phi, and then ∆pfkA ∆gapA::gapC with pFC139 | Illumina/ | /var/data/CP009273_1.gb | |
A1 F30 I0 R1 | population | The medium is mixing a ratio of HDA and MOPS-EZ with 400 mM of MeOH, HDA:MOPS = 100% | other | MeOH(400) | None | None | None | None | 37 | 679895 | BW25113 ∆rpiA::FRT ∆rpiB ∆nupG::PLlacO1::medh/tkt(Mb)/tal(Kp)/hps(Mb)/phi SS3(intergenic site)::PLlacO1::medh/hps(Bm)/phi, and then ∆pfkA ∆gapA::gapC with pFC139 | Illumina/ | /var/data/CP009273_1.gb | |
A1 F41 I0 R1 | population | The medium is mixing a ratio of HDA and MOPS-EZ with 400 mM of MeOH, HDA:MOPS = 100% | other | MeOH(400) | None | None | None | None | 37 | 679895 | BW25113 ∆rpiA::FRT ∆rpiB ∆nupG::PLlacO1::medh/tkt(Mb)/tal(Kp)/hps(Mb)/phi SS3(intergenic site)::PLlacO1::medh/hps(Bm)/phi, and then ∆pfkA ∆gapA::gapC with pFC139 | Illumina/ | /var/data/CP009273_1.gb | |
A1 F66 I1 R1 | clonal | The medium is mixing a ratio of HDA and MOPS-EZ with 400 mM of MeOH, HDA:MOPS = 100% | other | MeOH(400) | None | None | None | None | 37 | 679895 | BW25113 ∆rpiA::FRT ∆rpiB ∆nupG::PLlacO1::medh/tkt(Mb)/tal(Kp)/hps(Mb)/phi SS3(intergenic site)::PLlacO1::medh/hps(Bm)/phi, and then ∆pfkA ∆gapA::gapC with pFC139 | Illumina/ | /var/data/CP009273_1.gb |