Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F6 I1 R1
|
81 |
160.8 |
7353682 |
98.1% |
7213962 |
137.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
pS4413_qbsFGH |
107 |
G→A |
intergenic (–/‑3255) |
– / → aadA CDS |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | pS4413_qbsFGH | 107 | 0 | G | A | 99.8%
| 9245.1
/ NA
| 2336 | intergenic (–/‑3255) | –/aadA CDS | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (1642/689); minor base C (4/1); total (1646/690) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 2336 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGATTACCTGGGACTGGATAAAGTGCTGGA > pS4413_qbsFGH/1‑242
|
actgagcctttcgttttttttgatgcctTTAATTAATAGGTGACAATTAATCATCGGCATAGTATATCGGCATAGTAAAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTAc > 2:562454‑M1/29‑139 (MQ=255)
tgagcctttcgttttatttgatgcctTTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCa > 2:1976481‑M1/27‑139 (MQ=255)
cctttcgttttatttgatgcctTTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCaggag < 1:3074579‑M1/117‑1 (MQ=255)
cctttcgttttatttgatgcctTTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCaggag > 2:2034910‑M1/23‑139 (MQ=255)
ctttcgttttatttgatgcctTTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCaggagg > 2:1431439‑M1/22‑139 (MQ=255)
gttttatttgatgcctTTAATTAATTGTTGACAATTAATCATCGGCATAGTATTTCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGaaaaa < 2:1694815‑M1/123‑1 (MQ=255)
gatgcctTTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGc > 1:970796‑M1/8‑139 (MQ=255)
gatgcctTTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGc > 2:3368610‑M1/8‑139 (MQ=255)
cctTTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCtt > 1:768050‑M1/4‑139 (MQ=255)
cctTTAATTAATTGTTGACAATTAATCATCGGCATAGTAAATCGCCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCCCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCtt > 2:3509097‑M1/4‑139 (MQ=255)
attaattgTTGACAATTAATCATCGGCATTGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGACCCt > 2:495993‑M2/9‑139 (MQ=255)
attaattgTTGACAATTAATCATCGGCATAGTAAATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCt < 2:625250‑M2/131‑1 (MQ=255)
gTTGACAATTAATCATCGGCATTGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCa > 2:2438730‑M2/2‑139 (MQ=255)
atcggcatagtatatcggcatagtatAATACGACAAGGTGAGGAACTAAACCCCTTGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCCCCAAACCAAAcccc > 2:2732607/1‑139 (MQ=255)
atcggcatagtatatcggcatagtatAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAAcccc > 2:829556/1‑139 (MQ=255)
cggcatagtatatcggcatagtataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCaa < 2:2248723/139‑1 (MQ=255)
catagtatatcggcatagtataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAg > 2:2084184/1‑139 (MQ=255)
catagtatatcggcatagtataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAg > 1:82212/1‑139 (MQ=255)
tagtatatcggcatagtataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTg < 1:1945295/139‑1 (MQ=255)
agtatatcggcatagtataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTgg < 1:2607371/139‑1 (MQ=255)
tatcggcatagtataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATg < 1:1890213/139‑1 (MQ=255)
cggcatagtataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCGCTTGCCCCTACATGCAGCAAACCAAACCCCAACAGAGGCATGACg > 1:638497/1‑139 (MQ=255)
catagtataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCACCAGTGGCATGACGCCa > 2:2618990/1‑139 (MQ=255)
catagtataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCa < 2:1812629/139‑1 (MQ=255)
catagtataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCa > 2:1253649/1‑139 (MQ=255)
catagnataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCa > 1:3382671/1‑139 (MQ=255)
tagtataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCaaa > 2:2851855/1‑139 (MQ=255)
agtataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAAc > 1:1003916/1‑139 (MQ=255)
agtataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACAAATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAAc > 2:2794637/1‑139 (MQ=255)
tataATACGACAAGGTGAGGAACTAATCCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATAAGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACTGTGGCATGACGCCAAACTg > 2:2558398/1‑139 (MQ=255)
tataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACAt > 2:2498034/1‑99 (MQ=255)
tataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTg > 1:1172952/1‑139 (MQ=255)
tataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTg > 1:2924475/1‑139 (MQ=255)
tataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTg > 1:3228046/1‑139 (MQ=255)
tataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTg > 2:3645914/1‑139 (MQ=255)
tataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTg > 1:2547306/1‑139 (MQ=255)
tataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTg > 1:1368357/1‑139 (MQ=255)
tataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTg > 1:218613/1‑139 (MQ=255)
tataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTg > 1:3598552/1‑139 (MQ=255)
tataATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTg > 1:1124023/1‑139 (MQ=255)
tataAAACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTg > 2:3125626/1‑139 (MQ=255)
cGACAAGGTGAGGATCTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCg < 1:2475019/139‑1 (MQ=255)
cGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCg < 1:181132/139‑1 (MQ=255)
cGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCg > 1:1580602/1‑139 (MQ=255)
aaGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGa > 2:2185019/1‑139 (MQ=255)
aaGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGa > 2:3562524/1‑139 (MQ=255)
aGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaa > 1:2744548/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCCCCAAACCAAACCCCAACAGTGGCATGACGCCAACCTGGACTTCGGCGaaa > 2:433185/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaat > 2:2139354/1‑138 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 2:3187248/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 1:1297723/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 1:1499023/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 1:1737374/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 2:1906370/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 1:198909/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 1:2116365/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 1:2293715/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 2:1645666/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 2:1574052/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 2:3434076/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 2:1312458/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 1:3303485/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 2:2307269/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 1:352470/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 2:3318328/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 2:3054909/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 1:572190/1‑139 (MQ=255)
ggTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAATGGCATGACGCCAAACTGGACTTCGCCGaaa > 1:3140808/1‑139 (MQ=255)
ggTGAGGAACTAAACCCATAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGaaa > 1:3461972/1‑139 (MQ=255)
tGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATc < 1:1066034/139‑1 (MQ=255)
gAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACGAGGAGGAAAAACTTTTGTGCCCTTGCGCCTACATGCACCAAACCAAACCCCAACAGTGGCCTGACGCCAAACTGGACTTCGCCGAAATCa > 2:1855860/1‑139 (MQ=255)
gAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATAtgtg > 2:912588/1‑68 (MQ=255)
gAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCa > 2:1175155/1‑139 (MQ=255)
aaCTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAg > 2:3257329/1‑139 (MQ=255)
aaCTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAg > 1:886004/1‑139 (MQ=255)
aCTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATg > 2:2978835/1‑107 (MQ=255)
aCCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACgg < 2:1764084/139‑1 (MQ=255)
aCCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACgg < 2:1037378/139‑1 (MQ=255)
cccTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCg > 1:12340/1‑139 (MQ=255)
cccTAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCg > 1:2043703/1‑139 (MQ=255)
tAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGAtt < 2:2389139/139‑1 (MQ=255)
tAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGAtt < 1:2390651/139‑1 (MQ=255)
tAGGCCGCGGCCGCGCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGAtt < 1:2237353/139‑1 (MQ=255)
gccgcggccgcgCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGATTAcc > 2:2918394/1‑139 (MQ=255)
ccgcggccgcgCGAATTCGAGCTCAGTACCAGGAGGAAATACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGATTACCt < 2:2656898/139‑1 (MQ=255)
ccgcggccgcgCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGATTACCt < 2:1366082/139‑1 (MQ=255)
cgcggccgcgCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGATTACCTg > 1:288531/1‑139 (MQ=255)
gcggccgcgCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGATTACCTgg < 1:378282/139‑1 (MQ=255)
gccgcgCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGATTACCTGGGAc > 1:709118/1‑139 (MQ=255)
ccgcgCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTg < 2:1499940/82‑1 (MQ=255)
ccgcgCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCACACTGGACTTCGCCGAAATCATGAGTTACGGCGATTACCTGGGACt > 1:1422431/1‑139 (MQ=255)
ccgcgCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGATTACCTGGGACt > 1:2817722/1‑139 (MQ=255)
ccgcgCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGATTACCTGGGACt > 2:747697/1‑139 (MQ=255)
ccgcgCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGATTACCTGGGACt > 1:1665985/1‑139 (MQ=255)
ccgcgCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGATTACCTGGGACt > 1:2686071/1‑139 (MQ=255)
ccgcgCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGATTACCTGGGACt > 1:432805/1‑139 (MQ=255)
ccgcgCGAATTCGAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGATTACCTGGGACt > 2:1109592/1‑139 (MQ=255)
gcgcgAAGTCGAGCTCAGTACCAGGAGGAATAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGATTACCTGGGACTgg < 1:2999608/139‑1 (MQ=255)
gAGCTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGATTACCTGGGACTGGATAAAGTGCt < 2:689574/139‑1 (MQ=255)
cTCAGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGATTACCTGGGACTGGATAAAGTGCTGGa < 1:504931/139‑1 (MQ=255)
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‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATGCACCAAACCAAACCCCAACAGTGGCATGACGCCAAACTGGACTTCGCCGAAATCATGAGTTACGGCGATTACCTGGGACTGGATAAAGTGCTGGA > pS4413_qbsFGH/1‑242
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
