Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F37 I1 R1
|
57 |
76.9 |
3276914 |
98.4% |
3224483 |
146.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_002947_CJ‑RC |
5,578,873 |
G→A |
P31S (CCG→TCG) |
motA ← |
flagellar motor rotation protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_002947_CJ‑RC | 5,578,873 | 0 | G | A | 100.0%
| 268.2
/ NA
| 77 | P31S (CCG→TCG) | motA | flagellar motor rotation protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (41/36); total (41/36) |
GCCCAGCACCTCCAGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGGCTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGACGGGAGCTTTAAAACT > NC_002947_CJ‑RC/5578727‑5579017
|
gCCCAGCACCTCCAGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACt < 5:122496/149‑1 (MQ=255)
cccAGCACCTCCAGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTg > 4:258051/1‑149 (MQ=255)
ccAGCACCTCCAGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTgg < 3:59186/149‑1 (MQ=255)
ccAGCACCTCCAGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTg > 1:93757/1‑148 (MQ=255)
cACCTCCAGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCa < 4:228441/149‑1 (MQ=255)
ccTCCAGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAgc < 2:94764/149‑1 (MQ=255)
cTCCAGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAgcg > 4:143774/1‑149 (MQ=255)
tCCAGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAgcg > 2:109949/1‑148 (MQ=255)
cAGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAgcg < 1:109949/146‑1 (MQ=255)
aGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGc > 5:185853/1‑149 (MQ=255)
gTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGa < 5:375645/149‑1 (MQ=255)
gTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGa < 7:264399/149‑1 (MQ=255)
gAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATc < 1:316268/148‑1 (MQ=255)
aaGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCtt > 4:300032/1‑149 (MQ=255)
ggCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGc > 8:241791/1‑149 (MQ=255)
aTGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGt > 8:310243/1‑149 (MQ=255)
gCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTgg < 7:142208/148‑1 (MQ=255)
cTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGga < 1:137611/149‑1 (MQ=255)
tGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTgg > 6:42307/1‑146 (MQ=255)
tGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTgg > 4:159322/1‑146 (MQ=255)
aaGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGgaga < 3:33869/148‑1 (MQ=255)
gCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCa > 7:7087/1‑149 (MQ=255)
aGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAg < 4:205173/149‑1 (MQ=255)
cGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAgccg > 6:141133/1‑149 (MQ=255)
aaCATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAgccgcc < 3:174491/149‑1 (MQ=255)
aCATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGccgccg < 7:219877/149‑1 (MQ=255)
cATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGa < 7:310243/149‑1 (MQ=255)
atgttCATCGACTTCTTGATGACGTGCATGGTCATGTGGCGAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAg < 8:61131/146‑1 (MQ=255)
tCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTc > 6:101192/1‑149 (MQ=255)
tCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACATCGAACGACTGGATCAGCGCTGAGATCTTGCAGTGGGAGAGCACGTAGCCGCCGAGCACGATc > 5:26636/1‑149 (MQ=255)
aCTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTcgcg < 7:126180/149‑1 (MQ=255)
tcttGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGaa > 6:154914/1‑148 (MQ=255)
cttGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGaa < 8:7087/147‑1 (MQ=255)
gatgaCGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATacga > 1:43836/1‑149 (MQ=255)
gatgaCGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATacg < 8:40647/148‑1 (MQ=255)
gatgaCGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATa < 6:184553/146‑1 (MQ=255)
tgaCGTGCATGGTCATGTGGCCAGGGTTGGCCTGAAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATacgacg < 7:91842/149‑1 (MQ=255)
aCGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACgat < 1:80441/149‑1 (MQ=255)
gCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGatgatg > 7:226595/1‑149 (MQ=255)
gCATGGTCATGTGGCCAGGGTTGCCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGatgatg > 4:37356/1‑149 (MQ=255)
aTGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGcc > 5:212033/1‑149 (MQ=255)
gTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTgg > 4:70898/1‑99 (MQ=255)
gTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTgg < 3:70898/99‑1 (MQ=255)
tCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGAt > 3:330169/1‑148 (MQ=255)
tCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGAt > 1:233576/1‑148 (MQ=255)
ccAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGc < 5:154914/149‑1 (MQ=255)
cAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGc > 4:392470/1‑148 (MQ=255)
cAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGc > 3:382261/1‑148 (MQ=255)
ggTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCa > 4:319291/1‑147 (MQ=255)
tGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCa > 8:69673/1‑147 (MQ=255)
ggccggAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCAAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCaaa < 4:21457/145‑1 (MQ=255)
gAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACt > 2:303749/1‑149 (MQ=255)
aTGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTg < 6:212033/149‑1 (MQ=255)
aTGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGAACTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTg > 6:223222/1‑149 (MQ=255)
cACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCt < 5:42307/148‑1 (MQ=255)
cACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTg < 2:93757/149‑1 (MQ=255)
ccAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGAGGATGATGCCGAGAATGTTAGCCATAGGTGCAAGGGACTTGCTGTc > 4:355121/1‑149 (MQ=255)
cAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCg > 5:255143/1‑149 (MQ=255)
cAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCg > 2:188570/1‑149 (MQ=255)
aaaGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGt > 1:319154/1‑149 (MQ=255)
gCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAgg < 3:258051/149‑1 (MQ=255)
aCCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAggg > 2:7330/1‑148 (MQ=255)
aCCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAggg > 1:110359/1‑148 (MQ=255)
ccgccgATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGt > 8:172183/1‑148 (MQ=255)
ccgccgATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGt > 7:188928/1‑148 (MQ=255)
gccgATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAag < 2:110359/149‑1 (MQ=255)
ccgATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTaa > 4:110644/1‑147 (MQ=255)
atgatCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGAc > 7:352642/1‑149 (MQ=255)
atCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGACgg < 7:69673/148‑1 (MQ=255)
aGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGACGGGAg < 5:223222/148‑1 (MQ=255)
aGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGACGGGAGc < 3:80853/149‑1 (MQ=255)
ttCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAg > 6:200141/1‑101 (MQ=255)
ttCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAg < 5:200141/101‑1 (MQ=255)
ttCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGACGGGAGCTTTa > 5:8291/1‑148 (MQ=255)
ttCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGACGGGAGCTTTa > 8:244156/1‑148 (MQ=255)
cGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGACGGGAGCTTTaaa < 3:159322/148‑1 (MQ=255)
aaCGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGACGGGAGCTTTAAAAct < 8:226595/149‑1 (MQ=255)
|
GCCCAGCACCTCCAGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGGCTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGACGGGAGCTTTAAAACT > NC_002947_CJ‑RC/5578727‑5579017
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGGCCCAGCACCTCCAGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGGCTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGACGGGAGCTTTAAAACTCTTCTT > NC_002947_CJ‑RC/5578725‑5579023
|
AGGCCCAGCACATCCAGGTAGAAGGAATGGCTGAAGCGTGAGCAGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACT < NB501016:282:H2V7GAFX2:2:21304:25264:3128/151‑1 (MQ=60)
GGCCCAGCACCTCCAGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTG < NB501016:282:H2V7GAFX2:3:11510:1584:14348/151‑1 (MQ=60)
CCCAGCACCTCCAGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGA < NB501016:282:H2V7GAFX2:2:11111:9579:10342/151‑1 (MQ=60)
CCCAGCACCTCCAGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGG > NB501016:282:H2V7GAFX2:1:11204:20663:11395/1‑150 (MQ=60)
CCAGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGC < NB501016:282:H2V7GAFX2:1:11207:2419:7538/148‑1 (MQ=60)
CAGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCG > NB501016:282:H2V7GAFX2:3:11609:12691:4514/1‑151 (MQ=60)
GGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGAT < NB501016:282:H2V7GAFX2:3:21607:22957:4208/151‑1 (MQ=60)
GGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGAT < NB501016:282:H2V7GAFX2:4:21409:17319:14371/151‑1 (MQ=60)
AGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCT < NB501016:282:H2V7GAFX2:1:21207:5808:16499/150‑1 (MQ=60)
GGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGG < NB501016:282:H2V7GAFX2:4:11512:20903:13897/150‑1 (MQ=60)
GCTGAAGCGTGAGCCTAACATCTTCATCGACTTCTTGATGACGGGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAG < NB501016:282:H2V7GAFX2:1:11212:24207:3170/151‑1 (MQ=60)
GAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAG < NB501016:282:H2V7GAFX2:2:11107:25506:2391/150‑1 (MQ=60)
AGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCAC > NB501016:282:H2V7GAFX2:4:11402:16239:5043/1‑151 (MQ=60)
GAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCG < NB501016:282:H2V7GAFX2:2:11307:21764:2729/151‑1 (MQ=60)
AACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGA < NB501016:282:H2V7GAFX2:4:21402:8057:5824/151‑1 (MQ=60)
ACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAG < NB501016:282:H2V7GAFX2:4:21505:15486:7226/151‑1 (MQ=60)
ATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACATCGAACGACTGGATCAGCGCTGAGATCTTGCAGTGGGAGAGCACGTAGCCGCCGAGCACGatcc > NB501016:282:H2V7GAFX2:3:11405:19825:16730/1‑147 (MQ=60)
GACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGA < NB501016:282:H2V7GAFX2:4:11509:13115:19898/151‑1 (MQ=60)
TGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGAC > NB501016:282:H2V7GAFX2:1:11108:23505:3715/1‑151 (MQ=60)
ATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGAAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGA < NB501016:282:H2V7GAFX2:4:11504:9528:5033/151‑1 (MQ=60)
GACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATG < NB501016:282:H2V7GAFX2:1:11202:17468:5768/151‑1 (MQ=60)
TGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGC > NB501016:282:H2V7GAFX2:4:21403:3370:8580/1‑151 (MQ=60)
CATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCG > NB501016:282:H2V7GAFX2:3:21401:15246:15483/1‑151 (MQ=60)
GGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGG < NB501016:282:H2V7GAFX2:2:11201:7625:11415/101‑1 (MQ=60)
GTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATA > NB501016:282:H2V7GAFX2:2:21212:21645:13544/1‑150 (MQ=60)
GTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATA > NB501016:282:H2V7GAFX2:1:21105:1661:3820/1‑150 (MQ=60)
GCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCC < NB501016:282:H2V7GAFX2:3:11604:9234:2763/151‑1 (MQ=60)
CCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCC > NB501016:282:H2V7GAFX2:2:21309:18435:20352/1‑150 (MQ=60)
GCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTG < NB501016:282:H2V7GAFX2:3:11408:2815:14259/150‑1 (MQ=60)
CCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGT > NB501016:282:H2V7GAFX2:3:21410:18508:1542/1‑151 (MQ=60)
CAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTG > NB501016:282:H2V7GAFX2:1:21208:11821:7796/1‑151 (MQ=60)
CGCACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGG < NB501016:282:H2V7GAFX2:2:21109:6393:18123/151‑1 (MQ=60)
CACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGT > NB501016:282:H2V7GAFX2:1:11207:13917:8945/1‑150 (MQ=60)
ACCGCCGATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTA > NB501016:282:H2V7GAFX2:4:11608:21979:18310/1‑150 (MQ=60)
GATGATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGACG > NB501016:282:H2V7GAFX2:4:21512:20279:10111/1‑151 (MQ=60)
GATCAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGACGGG < NB501016:282:H2V7GAFX2:4:11412:16455:9364/150‑1 (MQ=60)
CAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGACGGGAGCT < NB501016:282:H2V7GAFX2:2:11203:25392:6240/151‑1 (MQ=60)
CAGTACTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGACGGGAGC < NB501016:282:H2V7GAFX2:3:21403:4093:19811/150‑1 (MQ=60)
CTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGACGGGAGCTTTAA > NB501016:282:H2V7GAFX2:3:11402:2842:10631/1‑150 (MQ=60)
CTTCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGG < NB501016:282:H2V7GAFX2:3:11611:5375:12191/103‑1 (MQ=60)
TCGAACGACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGACGGGAGCTTTAAAA < NB501016:282:H2V7GAFX2:2:11304:3886:12525/150‑1 (MQ=60)
ACTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGACGGGAGCTTTAAAACTCTTCTT < NB501016:282:H2V7GAFX2:2:21210:19552:11469/151‑1 (MQ=60)
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AGGCCCAGCACCTCCAGGTAGAAGGCATGGCTGAAGCGTGAGCCGAACATCTTCATCGACTTCTTGATGACGTGCATGGTCATGTGGCCAGGGTTGGCCTGCAGGAATGCACCAAAGGCCGCACCGCCGATGATCAGTACTTCGAACGGCTGGATCAGCGCTGCGATCTTGCCGTGGGAGAGCACGTAGCCGCCGAGCACGCTCGCGAATACGACGATGATGCCGATAATTTTAGCCATAGGTTCAAAGCACTTGCTGTCGTGGTCAGGGTAAGAGACGGGAGCTTTAAAACTCTTCTT > NC_002947_CJ‑RC/5578725‑5579023
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
