Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F43 I1 R1
|
60 |
76.0 |
3234326 |
98.3% |
3179342 |
146.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC |
NC_002947_CJ‑RC |
3,071,445 |
(CCGTCG)1→2 |
coding (298/1164 nt) |
yiaY → |
Fe‑containing alcohol dehydrogenase |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_002947_CJ‑RC |
= 3071434 | 0 (0.000) | 74 (1.030)
+CGTCGC |
57/258 |
0.1 |
100% |
coding (287/1164 nt) |
yiaY |
Fe‑containing alcohol dehydrogenase |
| ? | NC_002947_CJ‑RC |
3071435 = |
0 (0.000) | coding (288/1164 nt) |
yiaY |
Fe‑containing alcohol dehydrogenase |
CGCCGCCGGCTGGGTGGCGGATGTGGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947_CJ‑RC/3071288‑3071434
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGCTGATCCTGATCCCGAC > NC_002947_CJ‑RC/3071435‑3071572
||||||
CGCCGCCGGCTGGGTGGCGGATGTGGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCG > 8:396071/1‑149
GCCGCCGGCTGGGTGGCGGATGTGGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGT > 2:205417/1‑149
CCGCCGGCTGGGTGGCGGATGTGGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTC > 4:39183/1‑149
GCCGGCTGGGTGGCGGATGTGGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGC < 7:172197/149‑1
TGGGTGGCGGATGTGGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGC > 7:375501/1‑149
TGGGTGGCGGATGTGGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGC > 2:68040/1‑149
GCGGATGTGGAGGCCAGCCTGCAGGCCCAGGGTATCAACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCG < 7:95603/148‑1
GGATGTGGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTG > 7:196049/1‑149
GATGTGGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGG < 5:236206/149‑1
TGTGGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCG < 8:43018/149‑1
GGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGG > 8:329005/1‑147
GAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAG > 7:15665/1‑149
GAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCA < 7:134366/148‑1
GGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCC > 6:141701/1‑149
GCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCC < 8:2920/149‑1
AGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGAT < 8:210705/149‑1
GCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTGTCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATG < 8:27446/149‑1
GCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATG < 1:342632/149‑1
GCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATG < 4:221096/149‑1
TGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGTTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGAT > 1:94729/1‑149
GGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCG < 1:205417/149‑1
GGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCG < 1:93342/149‑1
GGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCG < 5:184896/149‑1
GCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGG > 7:212623/1‑149
GCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGG > 2:54538/1‑149
AGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAG < 2:31035/149‑1
AGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAG < 7:396071/149‑1
GGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGG < 7:201498/149‑1
GACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCG < 1:104573/148‑1
CTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATC < 6:20775/148‑1
GCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTG > 4:320943/1‑149
CCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGGCGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTG < 2:372122/148‑1
CTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGT < 8:375501/149‑1
TGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTG > 5:93967/1‑149
TACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGG < 6:26188/148‑1
TACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTG < 8:78125/147‑1
TACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTG < 1:291951/147‑1
ACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGC < 2:165112/148‑1
ACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCA > 3:249527/1‑149
GCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGG < 4:227536/149‑1
GGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGC < 2:159377/149‑1
TCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAG > 2:61908/1‑149
TCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCA < 1:298474/148‑1
TCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCA < 1:271830/148‑1
ACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATGTATCGGCAGAACCACTGTGACGTGATCGTCG‑‑GTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATC > 8:154406/1‑149
CCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATC > 6:306888/1‑149
CAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCC > 3:162456/1‑149
CCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCG > 2:103551/1‑148
TCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAA < 5:185513/149‑1
TCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAA < 5:137628/149‑1
TCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAA < 5:373802/149‑1
GAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGG > 7:121308/1‑149
GAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGT > 2:225830/1‑149
GAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGT < 3:320943/149‑1
AGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTG < 3:46041/149‑1
GGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTG > 6:395963/1‑148
GTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGA < 3:39183/149‑1
GATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACA > 1:97882/1‑149
GATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACA > 1:195119/1‑149
ATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACAT > 3:152737/1‑149
GCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGAAATGA > 8:299568/1‑149
GCTCGGCGCCGAGATCTATCGGCAGAACCACTGAGACGAGATCGTCGCCGTCGCCCTCGGTGGCGGCAGCCCGATGCATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATG > 3:278327/1‑148
CTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGA < 1:68040/148‑1
CGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGC > 6:154742/1‑149
GAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATACGCGTGCC > 4:259840/1‑149
CTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCC > 2:78090/1‑149
TCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGC < 7:58264/145‑1
GCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGC < 8:110550/149‑1
GCAGAACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCCCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGC > 6:79/1‑149
AACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGCTGAT < 6:75425/149‑1
AACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGCTGAT > 4:313606/1‑149
AACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGCTGAT < 7:350482/149‑1
AACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGCTGAT > 4:319159/1‑149
ACCACTGTGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGCTGATC < 8:42375/149‑1
TGACGTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGCTGATCCTGATCC > 5:82772/1‑149
GTGATCGTCGCCGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGCTGATCCTGATCCCGAC > 7:188825/1‑149
||||||
CGCCGCCGGCTGGGTGGCGGATGTGGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947_CJ‑RC/3071288‑3071434
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTCGCCGTCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGCTGATCCTGATCCCGAC > NC_002947_CJ‑RC/3071435‑3071572
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGGGTGGCGGATGTGGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGAT‑‑‑‑‑‑CGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGCTGATCCTGATCCCGACCACCGCCGGCACCTCGGCGGACG > NC_002947_CJ‑RC/3071297‑3071595
|
CTGGGTGGCGGATGTGGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGAT‑‑‑‑‑‑CGTCGCCG‑‑‑‑‑‑TCGcc > NB501016:282:H2V7GAFX2:4:21605:24234:8427/1‑149 (MQ=60)
GGCGGATGTGGAGGCCAGCCTGCAGGCCCAGGGTATCAACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGAT‑‑‑‑‑‑CGTCGCCG‑‑‑‑‑‑TCGccgtcgg < NB501016:282:H2V7GAFX2:4:11505:8039:3018/150‑8 (MQ=60)
CGGATGTGGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGAT‑‑‑‑‑‑CGTCGCCG‑‑‑‑‑‑TCGccgtcggtgg > NB501016:282:H2V7GAFX2:4:11610:17233:10975/1‑141 (MQ=60)
GGATGTGGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGAT‑‑‑‑‑‑CGTCGCCG‑‑‑‑‑‑TCGccgtcggtggc < NB501016:282:H2V7GAFX2:3:21406:5027:19508/151‑12 (MQ=60)
GGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGC > NB501016:282:H2V7GAFX2:4:11403:3029:14183/1‑151 (MQ=60)
GGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAG < NB501016:282:H2V7GAFX2:4:11511:8338:12557/150‑1 (MQ=60)
AGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGG < NB501016:282:H2V7GAFX2:1:21301:17760:2440/151‑1 (MQ=60)
CTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGTTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATT > NB501016:282:H2V7GAFX2:1:11204:18832:13942/1‑151 (MQ=60)
AGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGG < NB501016:282:H2V7GAFX2:1:11204:20144:9450/151‑1 (MQ=60)
AGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGG < NB501016:282:H2V7GAFX2:1:11312:24450:10680/151‑1 (MQ=60)
AGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGG < NB501016:282:H2V7GAFX2:3:11609:24980:7792/151‑1 (MQ=60)
GGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGC > NB501016:282:H2V7GAFX2:4:21401:1177:8889/1‑151 (MQ=60)
CAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGG < NB501016:282:H2V7GAFX2:4:21609:24458:2785/151‑1 (MQ=60)
AGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGC < NB501016:282:H2V7GAFX2:4:11611:13013:10432/151‑1 (MQ=60)
CGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGG < NB501016:282:H2V7GAFX2:1:11206:23875:8236/150‑1 (MQ=60)
CTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGG > NB501016:282:H2V7GAFX2:3:11506:24072:1589/1‑151 (MQ=60)
GTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGG < NB501016:282:H2V7GAFX2:1:21203:21327:19907/149‑1 (MQ=60)
CACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCAT > NB501016:282:H2V7GAFX2:2:21108:20323:16722/1‑151 (MQ=60)
GTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAG < NB501016:282:H2V7GAFX2:1:21112:21960:7091/150‑1 (MQ=60)
GTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAG < NB501016:282:H2V7GAFX2:1:21205:3803:3593/150‑1 (MQ=60)
CCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCT > NB501016:282:H2V7GAFX2:2:11305:17376:8534/1‑151 (MQ=60)
GTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAG < NB501016:282:H2V7GAFX2:3:21607:26673:15440/151‑1 (MQ=60)
GTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAG < NB501016:282:H2V7GAFX2:3:11601:8772:11067/151‑1 (MQ=60)
GTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAG < NB501016:282:H2V7GAFX2:3:11609:15351:9723/151‑1 (MQ=60)
CGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGC > NB501016:282:H2V7GAFX2:4:11509:19909:9643/1‑151 (MQ=60)
GGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTG < NB501016:282:H2V7GAFX2:2:21211:9324:11843/151‑1 (MQ=60)
GAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGG < NB501016:282:H2V7GAFX2:2:11109:1613:7338/151‑1 (MQ=60)
GGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGAC < NB501016:282:H2V7GAFX2:2:11108:14874:2962/151‑1 (MQ=60)
TGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACAT > NB501016:282:H2V7GAFX2:1:11205:26004:5312/1‑151 (MQ=60)
TGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACAT > NB501016:282:H2V7GAFX2:1:11310:13101:12056/1‑151 (MQ=60)
GATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATG > NB501016:282:H2V7GAFX2:2:11303:17434:15838/1‑151 (MQ=60)
TGCTCGGCGCCGAGATCTATCGGCAGAACCACTGAGACGAGAT‑‑‑‑‑‑CGTCGCCGTCGCCCTCGGTGGCGGCAGCCCGATGCATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGA > NB501016:282:H2V7GAFX2:2:21203:2754:10227/1‑150 (MQ=60)
GCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGAT < NB501016:282:H2V7GAFX2:1:11112:17940:3568/150‑1 (MQ=60)
ATCGGCAGAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCC < NB501016:282:H2V7GAFX2:4:11410:25173:16387/147‑1 (MQ=60)
GAACCACTGTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGCTGATC < NB501016:282:H2V7GAFX2:4:21512:19549:18632/151‑1 (MQ=60)
GTGACGTGATCGTCGCCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGCTGATCCTGATCCC > NB501016:282:H2V7GAFX2:3:11504:14421:3621/1‑151 (MQ=60)
cgtgatcgtcgcCGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGCTGATCCTGATCCCGACC > NB501016:282:H2V7GAFX2:4:11609:18436:5822/13‑151 (MQ=60)
CGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGCTGATCCTGATCCCGACCACCGCCGGCACC > NB501016:282:H2V7GAFX2:3:21612:15318:12691/1‑151 (MQ=60)
GGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGCTGATCCTGATCCCGACCACCGCCGGCACCTCGGCGGACG < NB501016:282:H2V7GAFX2:1:11309:26565:9160/151‑1 (MQ=60)
GGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGCTGATCCTGATCCCGACCACCGCCGGCACCTCGGCGGACG < NB501016:282:H2V7GAFX2:1:11308:1083:9162/151‑1 (MQ=60)
GGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGCTGATCCTGATCCCGACCACCGCCGGCACCTCGGCGGACG > NB501016:282:H2V7GAFX2:4:11408:9044:3195/1‑151 (MQ=60)
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CTGGGTGGCGGATGTGGAGGCCAGCCTGCAGGCCCAGGGTATCGACTACTGCCTGTACACAGCGGTGTCACCCAACCCGCGGGTCGAGGAGGTGATGCTCGGCGCCGAGATCTATCGGCAGAACCACTGTGACGTGAT‑‑‑‑‑‑CGTCGCCG‑‑‑‑‑‑TCGGTGGCGGCAGCCCGATGGATTGCGGCAAGGCCATCGGTATCGTGGTGGCCCATGGGCGCAGCATCCTCGAATTCGAAGGCGTGGACATGATCCGCGTGCCCAGCCCGCCGCTGATCCTGATCCCGACCACCGCCGGCACCTCGGCGGACG > NC_002947_CJ‑RC/3071297‑3071595
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
