Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F92 I1 R1
|
12 |
129.3 |
2355075 |
89.0% |
2096016 |
291.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,529,203 |
C→A |
pseudogene (1302/2037 nt) |
rhsE → |
pseudogene, Rhs family |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,529,203 | 0 | C | A | 96.5%
| 175.3
/ NA
| 85 | pseudogene (1302/2037 nt) | rhsE | pseudogene, Rhs family |
| Reads supporting (aligned to +/- strand): ref base C (2/1); new base A (42/40); total (44/41) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGATAGACCCAATGGGGTTAGATGCGATTGA > NC_000913/1528936‑1529499
|
cGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGCCGGTGGAGCCACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCGCATCTTTACCACTGCGACCCCCTGGGCACGCCggggggccataccagcccagacggac > 1:345273/1‑274 (MQ=11)
ggAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACCGGTTGAGCCGGAATCCACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCCCTGGCGCGTATCAGCGACAACGCGAAAACAGCCGGGGCCGGGGGGGGTG‑GGGAGAGGGGGAACCAGCTTAAAGGGG‑AGAAcac > 1:609054/1‑299 (MQ=11)
ggCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCGGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCGCATCTTTATCACTGCGACCCCCGGGGACTGCCGCTGGCGCTTATCAGCGAAGCAGGCAACACCGAGTGGGGCGGTG‑GTGCGCATGAATGGGTCCACCGGCTGAATgagaaaagccagcctccccgcgcccacc > 1:436165/1‑276 (MQ=11)
gCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGcc > 2:1039651/1‑301 (MQ=14)
cGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTACTGAGG‑AGAACCCGCCTCACCTGCACCAGCCg > 2:495136/1‑301 (MQ=9)
ggtggtacccGACTGAACGGGTGCGGCGGGTGGAGGGGGTGGAGGAAGAAAGCCGGGCAGACCGCGTGGGCAGGGGAGGCGGGGGGTGGCGTGCGCAGTGAGGGCGTGCGGTGGAGCAACCGGCCAGACAGGTGGAGCCGGAATACACACGGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGGGG‑AGAACCCGCATCACCTGCACCAGCCGTa < 1:941776/294‑1 (MQ=11)
gtgtCCCGGCTGGAGCGGTGGGGCGGGTGGACAGGCTGGGGGAAGAAATCGGGGCAGACCGGGTGGGCAGTGAAAGCCGGGCGTGGCTTGCGCAGGGCGGGCTGACGGGGGAGCAACTGGCCAGACAGGTGGAGCCGGAACACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGGGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCg < 1:465711/298‑1 (MQ=11)
gAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGCAGGCAATACCGCGGGGCGCGGGGAGCATG‑ATGAATGGGGCAACCAGCTCAATGAGG‑GAAACCCGCATCACCTCCACCAGCCGTACCGGCCGCCAGGgc > 1:678217/1‑301 (MQ=11)
gAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGgc < 2:814278/301‑1 (MQ=14)
aCTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGCCTGCCGCGGGCGCTTAGCCGCGAAGACGGCAATCCGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAAACGGCTTAATGAGGAAGACCCCGC‑TCACCTGCCCCAGCCCGACCCGCGGCCAggggcg > 1:1095514/1‑298 (MQ=11)
ggTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCCACCAGCTTAATGAGG‑GGAACCCGCATCACCTGCACCAGCCGTACCGTCCGCCAGGgcagccc > 2:1143614/1‑299 (MQ=255)
ggTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTACTGAGG‑AGAACCCGCATCCCCTGCCCCAGCCGGCCCGCCCGCCACGgcggg > 1:773000/1‑296 (MQ=11)
ggTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGGATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCAAGGgcagg > 2:1023799/1‑298 (MQ=9)
tgctgGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTCGAGCAACTGGCCAGACAGGTCGAGCCGGAATACACCCCGGCGCGCAAAGCTTCTCTTTATCACTGCGACCACCGGGGACTGTCACTGGCCCGTATCAGTGAAAACGGCAATACGGCGTGGCGCGGGGAGTCAG‑ATGGATGGGTAGACCAGCTTCATGAGG‑GGAAACCGCTTCCACCGCGCAAGCCGTCCGGTccctccgaggccgaggacgcggc > 1:690441/1‑279 (MQ=2)
gctgGACAGGCTGGAGGAAGAAAGCCGGGCAGACCGCGTGTGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGGGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCAtgatga < 2:436267/300‑1 (MQ=9)
tccggactgCTGAAGGAAGAACTCCGGGCAGACCGCGTTGGCACTGAACGCCGGGCGTGGTGTGCGCACTGCGGGCTTACGGTGTGGCAACTGGCCAGCCAGGTGGAGCCGGAACACCCACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCCCCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCAtgatga < 2:656716/291‑1 (MQ=11)
gtGGAGGAAGAAAGCCGGGCAGGCCGCGTGGGGAGGGAAGGCCGGGCGGGGCTTGCGCAGGGCGGGCGGACGGGGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGc < 1:179962/300‑1 (MQ=11)
tGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCCGGGCAGCAGCATGATGAGGGGTCGGGGcg > 2:180004/1‑300 (MQ=255)
gaggaAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGAAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCCGCATGATGAGGAGTCGCGGGTgg > 2:618399/1‑300 (MQ=255)
gggaAGAAAGCAGGGCGGACGGGGGGAGAAGGGAAGGCCGGGGGGGGCTGGCGCGGGGCGGGCGGACGGTGGAGCAACTGGCCAGACGGGTGGGGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTGATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTa < 1:495005/300‑1 (MQ=11)
cgccgcccttccgagcgtaCCGGGGGAGCAGGGAAGGCCGGGGGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCTAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTa < 1:740689/283‑1 (MQ=11)
aggaAGAAATCCGGGAAGACCGCGTGAGCAGTGAAGGCCGTGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGTCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTa < 2:1164474/301‑1 (MQ=255)
ggaAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCCGGGCAGCAGCATGATGAGGAGTCGGGGCTGTAc > 2:205077/1‑301 (MQ=16)
agaaaccggggcgagccGCGTGAGCCGGGAAGGCCGGGCGTGGCTTGCGCAGTGCAGGCGGGCGGGGGAAGAAATGGCCAGACAGGTGGTGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCAACGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACtat < 1:1023528/286‑1 (MQ=11)
cccGGGCGAACCGCGTGAGGAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTTACGGGGGAGCAACTGGACAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATATTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCg < 2:121987/300‑1 (MQ=11)
cGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTc > 2:514512/1‑301 (MQ=18)
gggCAGGCCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACTGTGGAGCAACTGTCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCa < 2:690639/301‑1 (MQ=255)
ttcccgacacgtcgctcttccgctctggCGTGGCTTGCGCAGTGCGGGCGGACGGGGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACGGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAAAGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCa < 1:942434/273‑1 (MQ=11)
gACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCCATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGCTGAGGCGTCGGGGCTGAACTATAACCGTCACCggg > 1:947036/1‑300 (MQ=255)
gACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTa > 2:740898/1‑284 (MQ=19)
ggCAGTGAAAGCCGGGCGTGGATTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATc < 2:773215/300‑1 (MQ=255)
cgagcggAAAGCCGGGGGTGGCTGGCGCAGGGCGGGCTGACGGTGGAGCAACGGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATc < 1:1014379/295‑1 (MQ=11)
gaaGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGAAGGTGGAGCAACCGGCCAGACAGGTGGCGCCGGAATACACCCCGGCGCGAAAAGCTCATCTTTATCACGGCGACCACCGGGGACTGCCGCTGGCTCTTATCAGCGGAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGCGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATcc < 2:1151973/299‑1 (MQ=11)
cAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGACAGGGCAGCAGCATGATGCGTAGTCGGGGCTGTACTATAACCGTCACCGGCACTAACATCCg > 2:862503/1‑301 (MQ=255)
tGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTACTGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGGCTGCCAGGGCGGCAGCATGATGGGGAGTCGGGGTTGTAATATAAGCGTCACCGGccactcggtccgtgg > 1:275783/1‑287 (MQ=11)
ggaaGCCCGGCGGGGCTTGCGCAGTGCGGGCGGAGGGGGGCGGATCTAGCCAGACAGGGAGAGCCGGAATACACACCGGCGCAAAAAGCTCATCTTGATCACTGCGCCCACCGGGGACGGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCTTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCAGGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGc < 1:506272/299‑1 (MQ=11)
gAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCCCTACGATCCGTTGc > 2:240770/1‑301 (MQ=255)
gAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTAGGGGCTGTACTATAACCGTCACCGGCACTACGGTc > 2:1014648/1‑295 (MQ=255)
gAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCGCAATGAGG‑GGAACCCGCATCACCTGCCCAAGCCGTAACGTCTGCCAGGGCAGGCGCAGGATGAGTAGTCGGGGGTGGACGAGAAcgcgccacgggcccacgagccgcgcc > 1:62136/1‑276 (MQ=11)
ccGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCCATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCCCATGCACCAGCCGTACCGTATGCCCGGGCAGCAGCATGATGCGGCGTCGGGGCTGTACTATAACCGTCACCGGCACTACGAGCCGTTGCGgggg > 2:380554/1‑301 (MQ=11)
ccGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGTGGGGAGTATG‑ATGAATGGGGCAACCAGCTTTATGAGG‑AGAACCCGCATCATCGGCACCATCCGTACCGTCTGCCAGTGCAGCCGCATGATGAGGAGTCGGGGCGGTAATATAACAGTCACCGGCACTAAGATCCGTTGCAgggg > 2:590194/1‑301 (MQ=11)
ggCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAAAGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCa > 2:942684/1‑273 (MQ=255)
ggCGTGGCTGGCGCCGGGGGGGGTGAAGGGGGAGCACCTGGCCAGGCAGGTGGAGCCGGAATACACAGCGGCGCGAAAAGCTCATCTGTATCACTGCGGCAACCGGGGACTGCGGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCgg < 1:138065/301‑1 (MQ=11)
gggtgcattggcAGGGCGGGCAGGCCGTGGAGGAACTGGCACGACAGGTGGACCCCGAGTACACACGAGGGCGGAGAGTGCATCTTTATCACGGCGGCGACCGGGGACTGCCGCTGGGGCTTGTCAGCGAAGGCGGCAATACGGCGTGGCGCGGGGCGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGACCCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGGGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGAGCCGTTGCAGGGGCGGta < 1:9325/291‑1 (MQ=11)
gggggggtggagagggggggCTGGAGGTGGGGCAACGGGGCAGACAGGGGGAGCCGGAATACCAACCGGCGGGAAAAGCTCATCTTTCTCACTGCGGCCACCGGGGACTGCCGCGGGGGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGta < 1:1039373/284‑1 (MQ=11)
cagggCGTGCGCAGTGCGTGCGGACGGTGAGGACACGGGCCGAACAGGTTGAGCCGGAAAACAAACAGGCGCAAACAGCTCATCTTTATCACTCCGACCACCGGGGACGGCCGCTGGCGCTTATCAGAGAAGACGGCAATACGGCGGTGCGCGGGGAGTATG‑ATGAATGGGGAAACCAGCTTAAGGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCATGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGta < 2:995057/298‑1 (MQ=255)
ggCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTACGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGCCGGCAATACGGCGTGGCGCGGGGAGTATG‑CTGAATGGGGCAACCAGCTTAATGAGG‑AGCACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCCGCGCGGTACGATAACCGTCACCGGCACTCCGATCCGTTGCAGGGGCgggagcg > 1:214956/1‑296 (MQ=11)
cTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCCCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACCATAACCGTCACCGGCACTACGACCCGTTGCCGGGGCGGCATATcc > 1:320999/1‑300 (MQ=255)
gTGCGGGGTGACGTTGGGGCAAAGTGCCCAACAGGTGGAGCCGGAATACCCCCCAGCGCGAAAAGCTCAACTTTAGAACTGCAACCAGCGGGGACGTCCGCGGGCGCTTGTAAGCGAAGCCGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGGCGTACCGTCTGCCAGGGCGGCAGCATGCTGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGTTCCGTTGCAGGGGCGGTATATCACCCCGGAc < 1:734157/301‑1 (MQ=14)
gCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACCGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGAtt < 2:62145/301‑1 (MQ=255)
gtgccGGTGGAGCAACTGGCCAGAAAGGTGGAGCCGGAATACACGCCGGCGCGAAAAGCTCAGCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTg < 1:205034/297‑1 (MQ=255)
ggggAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTga < 2:321069/299‑1 (MQ=255)
ggAGCAACCGGCCAGAGAGGTGGAGCCGGACTACACACCGGCGCGAAAAGCTCAGCTTTATCACGGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAGGACGGCAATACGGCGTGGCGCGGGGAGTATG‑AGGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTgaga < 2:759728/301‑1 (MQ=14)
aGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCCGGGCCGCCGCATGGTGAGGAGTCGGGGCTGTACTATACCCGTCACCGGCCATGCGAACCTGTGCAGGGGCGGTATATCACCCCGGACCCGTTTGGGTGGAGTgg > 1:1061011/1‑301 (MQ=14)
ccTGGCCAGACAGTGGGGGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGtgga < 2:251401/300‑1 (MQ=255)
ggCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCATCGGCACTACGATCCGTTGCAGGGGCGGTATAGCACCCCGGCCCCGCGTGGGTTGTGGGGtgggagg > 1:251352/1‑297 (MQ=14)
ggCCAGACAGGGGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGtggat < 2:827691/299‑1 (MQ=255)
aGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACCAACCGTTGCAGGGGGGGTATATCAACCCCGGCCCGATTCGGTGGCGAGGgggatgga > 1:214132/1‑298 (MQ=14)
ggTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCGGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGCTGAGGAGTCGGGGCTGTACTCTAACCGTCACCGGCCATACGCTCCGTTGCAGGGGCGGTAGATCACCCCGGACCCGATCGGGTTGATGGGGGGATGGAATCTGttt > 1:248459/1‑299 (MQ=11)
gggagaagcaagacacacCGGCGCGAAAATCTCATCTTTAGCCCTGCGACCACCGGTGACTGCTGCTGGCGCTTATCAGGGAAAACGGCAATAAGGCTTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCa < 2:691029/289‑1 (MQ=14)
gCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCACGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTAt > 2:424205/1‑301 (MQ=255)
cGGAATACCCACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACAGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATcc < 2:678410/301‑1 (MQ=255)
ggAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGTGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGGCGGGGCTGTACTATAACCGTCCCCGGCACCACGATCCGTTGCAGGGGCGGTATATCAACCCGGACCTGATTGGGTTGGGGGGGGGATGGGAGCTGTATcgggtaccg > 1:807777/1‑293 (MQ=14)
ccgccattccggactgaaaaccgcATCTTTATCACTGCGACCCCCGGGGAGTGCCGCTGGCGCTTATCAGCGAAGACGGCAATCCGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGtt < 1:289306/278‑1 (MQ=14)
aaacacacCGGCGCGAAAAGTTTATCTGTATCACTGCGACCACCGGGGAATGCCGCTGGCGCTTATCATCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTg < 2:434011/299‑1 (MQ=255)
aTACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTAACCGGCACTACGATCCGTTGCTGGGGCGGAATATCACCACGGACCCGAGGGGGTTGGGTGGTGGAGGGAATAGGTTACAGTCTGCGTTg > 1:974363/1‑301 (MQ=14)
acacccCGGCGCGAAAAGCCCATTTTTCACCCTGCGACCCCCGGGGCCTGCCGCGGGCGCTTAGCAGCGAAGACGGCAATACGGCGGGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGaa < 1:514371/301‑1 (MQ=17)
cacacCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCCGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGGACTATAACCGTCACCGGCACTTGGATCCAGTGCAGGGGGGGTATATCACCACGGGACCGATTGGGTTGGGGGGGGGGTGGAGTATGTTTCGGTGACCGTTGAAt > 2:812205/1‑301 (MQ=14)
cacCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCCCCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTAGACGTAGCCGTTGAATcc > 2:95182/1‑301 (MQ=255)
acCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGAATGGGTTGAGAGGAGGAAGGGATATGTATGAGTGGCCGGTGaaaacc > 1:229450/1‑297 (MQ=14)
gcgcGAAAAGCTCATCTTTAGCACTGCGACCACCGGGGACTGCCGCGGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAAGGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGAACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATAc < 2:214176/301‑1 (MQ=255)
gcgAAAAGCTCATCTTTATCCCGGCGACCCCCGGGGACGGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCg < 2:2333/286‑1 (MQ=255)
gcgAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCAGGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGAGGGGGCGGTATATAACCCCGGACCCGACAGGGGTGGGAGGTGGAGGGAATGGGTAGCAGTaacggagatcgggagagagg > 1:2333/1‑282 (MQ=14)
gAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGGGGATGGAAATTGTATCAGTATCCGtt > 2:289365/1‑286 (MQ=255)
gctCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCCCTACGATCCGTTGCAGGGGCGGGATATCACCCCGGACCCGATTGGGTGGAGGGGTGGATGGAAGATGTATCCGTATCCGTTGAATCCCATACACGTGATa > 1:1007882/3‑300 (MQ=17)
gctCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATACGTTGAATCCCAAACACGTGAt > 2:1079027/3‑299 (MQ=255)
ctCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCAACTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACAGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATGACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAGTATGTATCCGTATCCGTGTATCCCCATACAAGTAAt > 2:717821/2‑298 (MQ=14)
ccatcgttATCACTGCACACACCGGGGACTGCCGCTGGCGTTTATCAGCGGAGACGGCAATACGGCGTGGCGCGGGGGGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGATAGa < 1:95164/294‑1 (MQ=17)
acagtgtattcACTGCGACCACGGGGGACAGGAGCCGGCGTTAATGCGAGAAGACGGAAATAGGGGGGTGCGCGGGGAGTATG‑AGTAATGGGGCACCCAGCTTAATGAGG‑AGAACCCGCACAGCCTGACCCAGCGGTACAGTCTGCCAGGGCAGCGGCAGGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGATAGAc < 1:534535/291‑1 (MQ=255)
ctttATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGGGATAGAccaa > 2:771249/2‑298 (MQ=255)
ccccggCGGCCACGGGGGACTGCCGGGGGGTGTTATTAGCGAAGACGGCAATGCGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTGAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGATAGACCCAATgggg < 1:240721/296‑1 (MQ=18)
cggCGACCGCCGGGGACTGCCGCTGGCGCTTAGCAGCGAAGGAGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCATGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACGACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGATAGACCCAATGGGGTTa < 2:543169/299‑1 (MQ=255)
cccGGGGACGGCCGCGGGAGCTTATCAGCGAAGACGGAAATACGGCGTGGCGCGGGGAGTATG‑ATGAAGGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGATAGACCCAATGGGGTTAGATGCGAt < 2:974620/300‑1 (MQ=255)
ccGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGGGGATGTAATATGTATCAGTAACCGTTGAATCCCATACAAGTGATAGACCTAATGGGGTTATATGCGAtt > 2:819193/1‑301 (MQ=255)
ggggACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGATAGACCCAATGGGGTTAGATGCGATTga < 2:229498/301‑1 (MQ=255)
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CGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATG‑ATGAATGGGGCAACCAGCTTAATGAGG‑AGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGATAGACCCAATGGGGTTAGATGCGATTGA > NC_000913/1528936‑1529499
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
