Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F91 I1 R1 11 79.7 1483581 89.0% 1320387 285.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,355,035 G→A R146C (CGT→TGT)  sapB ← antimicrobial peptide transport ABC transporter permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,355,0350GA98.7% 237.8 / NA 76R146C (CGT→TGT) sapBantimicrobial peptide transport ABC transporter permease
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (37/38);  minor base C (0/1);  total (37/39)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AGGCGAGGAATAACCGGCGGTAACGCGTTATGCAGAACGTGGCGACGCAAAATAGTAAAGCGCGACAAACCGCGGGTCGCCGCCGCTTTTACATAGTTCTG‑GTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACGCCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTAACTGTTCGGCAATCGGTTGACCGTTAATGCTGGAAACACCAAAATCCCAGTGGATCAGGCCGTTAAAC  >  NC_000913/1354737‑1355330
                                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                                        
aGGCGAGGAATAACCGGCGGTAACGCGTTATGCAGAACGTGGCGACGCAAAATAGTAAAGCGCGACAAACCGCGGGTCGCCGCCGCTTTTACATAGTTCTG‑GTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGGACGAAACAcc                                                                                                                                                                                                                                                                                                        >  2:625158/1‑301 (MQ=255)
  gCGAGGAATAACCGGCGGTAACGCGTTATGCAGAACGTGGCGACGCAAAATAGTAAAGCGCGACAAACCGCGGGTCGCCGCCGCTTTTACATAGTTCTG‑GTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCCCCTGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAACCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATACAAACAcccc                                                                                                                                                                                                                                                                                                      >  1:236093/1‑300 (MQ=255)
        aaTAACCGGCGGTAACGCGTTATGCAGAACGTGGCGACGCAAAATAGTAAAGCGCGACAAACCGCGGGTCGCCGCCGCTTTTACATAGTTCTG‑GTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACACTGAAACg                                                                                                                                                                                                                                                                                                >  2:349813/1‑301 (MQ=255)
              cggcggTAACGAGTTATGCAGAACGGGGCGACGCAAAATAGTAAAGCGCGACAAACCGCGGGTCGACGCCGCTTTTACATAGTTCTG‑GTCATACACTTCGATAGGGCTGATACGCATCAGGAGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGcaac                                                                                                                                                                                                                                                                                          <  2:586968/301‑1 (MQ=255)
                   gtaaaccgTTATGCAGAACGTGGCAACGCAAAATAGGAAAGGGCGACAAACCGCGGGTCGCCTCCGCTTTTACATAGTTCTG‑GTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCaaccaacc                                                                                                                                                                                                                                                                                     <  1:349708/295‑1 (MQ=255)
                       cgcgTTATGCAGAACGTGGCGACGCAAAATAGTAAAGCGCGACAAACCGCGGGTCGCCGCCGCTTTTACATAGTTCTG‑GTCATACACTTCGATAGTGTTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTCGAGCAGATCGAAACACCCTCAAACGGGCAACCAACCTCGc                                                                                                                                                                                                                                                                                 >  2:219771/1‑301 (MQ=255)
                           ttATGCAGAACGTGGCGACGCAAAATAGTAAAGCGCGACAAACCGCGGGTCGCCGCCGCTTTTACATAGTTCTG‑GTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCgtg                                                                                                                                                                                                                                                                              <  2:726351/300‑1 (MQ=255)
                           ttATGCAAAACGTGGCGACGCAAAATAGTAAAGCGCGACCAACCGCGGGTCGCCGCCGCTTTTACATAGTTCTG‑GTCATACACGTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCgtg                                                                                                                                                                                                                                                                              <  2:190922/300‑1 (MQ=255)
                               acgagacctacggACGCAAAAAAGGAAAGCGCGACAAACCGCGGTACGCAGCCTCATTTTCA‑AATTCTGTGTCATAGACTTGGATAGTGCTGAAACGCATCAGGGGGATCGCTTCAGTTGTTGGCGCAACCGACAGGGGGAGAACGGGCAATATGAGATGGCGGATTGCGCTAATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATACACCCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCgtgagtg                                                                                                                                                                                                                                                                          <  1:603967/288‑1 (MQ=255)
                                      gTGGCGACGCAAAATAGTAAAGCGCGACAAACCGCGGATCGCCGCCGCTTTTACATAGTTCTG‑GTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAACCAGGCATCAATCAACGCAAAACCGGGAATCGGTTTCACTTCCTAGCGCAGATCTAAACACCCTGAAACGGGCAACAACCCTAGCGAGGGAG‑Aaaaaaa                                                                                                                                                                                                                                                                  >  1:442875/1‑300 (MQ=255)
                                        gtgccatttcgttctaaacgcgcGACAATCAGCGGTTGGCTGCTGATTTTACATAGTACTG‑GTCATACAGTTCGATAGTGCTAATACGCGTCAGGCGGATCACTTCAGTGGTAGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAg                                                                                                                                                                                                                                                               <  2:449800/282‑1 (MQ=255)
                                           gACGCAAAATAGTAAAGCGCGACAAACCGCGGGTCGCCGCCGCTTTTACATAGTTCTG‑GTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAAAACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCg                                                                                                                                                                                                                                                             >  2:222451/1‑300 (MQ=255)
                                                          cgcgggccAACCCGCGGGTCGCGGCCGCTTTTACATGATTCTG‑ATCATCCACTTCGATTGTGTTGATACGCATCAGGGGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCgccag                                                                                                                                                                                                                                             <  1:219697/294‑1 (MQ=255)
                                                                        cgGGTCGCCGCCGCTTTTACATAGTTCTG‑GTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGa                                                                                                                                                                                                                               <  2:236172/301‑1 (MQ=255)
                                                                         gggTCGCCGCCGCTTTTACATAGTTCTG‑GTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGAt                                                                                                                                                                                                                              <  2:708666/301‑1 (MQ=255)
                                                                                      ttttACATAGTTCTG‑GTCATCCACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAg                                                                                                                                                                                                                  <  2:443007/300‑1 (MQ=255)
                                                                                           aaTAGTTCTG‑GTCATACACTTCGATAGTGCTGATCCGCAGCAGGCGGATCACTTCAGTGGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACGTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGc                                                                                                                                                                                                            <  2:80022/300‑1 (MQ=255)
                                                                                             tAGTTCTG‑GTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCGTAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAACCAGCGTCAAAAGAAACGCCAGCAAGAACACCGGGCGTGAAAACGCCAGAAAGGCg                                                                                                                                                                                                           >  1:458284/1‑300 (MQ=255)
                                                                                                        ccgccgctcttcctgtcttGATAAGCATCAGGCGGATATCTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGAGTGCGCTCATGAACATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGAt                                                                                                                                                                                                <  1:720879/283‑1 (MQ=255)
                                                                                                         aTACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGGAATCGTTTTCACTTCGTAGAGAAGATCGAAACACCCTGAAACGGGCAACCAACCTAGAGGGAGTG‑AACAAAACAGAGCCAAAAGAAGCGCAACCAAGAACACCGGGATTGAAAAGCCCAGGAAGGCGATGGCGTTCAt                                                                                                                                                                                                >  2:644768/1‑300 (MQ=255)
                                                                                                            cacTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCACTAAGGCGATGGCGTTGATCa                                                                                                                                                                                              >  2:696393/1‑299 (MQ=255)
                                                                                                            acccccttccgatctgtgaCGCTTCAGGCGGATAACTTCAGTTGTTGGGGCAACCGAAAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAg                                                                                                                                                                                            <  1:417094/283‑1 (MQ=255)
                                                                                                              cTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCCACGCAAAACCGGTAATCGTTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACTACACAGCGTCAACAGAAGCGCCAGCCAGACCACCGGGATTGACAAGCCCAGTAAGGCGATGGCGTTGATCactgt                                                                                                                                                                                          >  2:322522/1‑297 (MQ=255)
                                                                                                                 cGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGGGTCAACAGAAGCGCAAGCCAGAACACCGGGATTCAAAAACCCAGTAAGACCATCGCGTTGATCACGTTAtt                                                                                                                                                                                       >  2:18092/1‑300 (MQ=255)
                                                                                                                         cttaTACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATAACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATc                                                                                                                                                                                               <  1:465106/282‑1 (MQ=255)
                                                                                                                         cTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATc                                                                                                                                                                                               >  2:465243/1‑285 (MQ=255)
                                                                                                                          tGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATGGAAAAGCCCAGAAAGGCGATGGCGTTAAtagatcgaaagagaaaacg                                                                                                                                                                              >  2:721080/1‑283 (MQ=255)
                                                                                                                           gATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAg                                                                                                                                                                                            >  2:417218/1‑286 (MQ=255)
                                                                                                                               cggaTCAGGCGGGTAACTTCGGTTGTTGGCGCAACCGACAGGTGGATCACGGGCAATATCAGATGGCGGATTGCGCTCATGATCATTTCAACCCGCAATGGTGAGTCCGAAATCCAGGCATCAATCAACGCAAACCCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCGAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGgc                                                                                                                                                                         <  1:644592/298‑1 (MQ=255)
                                                                                                                               cGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAACCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGCTGGCGTTGATCAAGTAATCCTGCCACTTATGgc                                                                                                                                                                         >  2:487783/1‑301 (MQ=255)
                                                                                                                                      ggCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTa                                                                                                                                                                             <  2:66419/290‑1 (MQ=255)
                                                                                                                                      ggCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGAGAGTG‑AAAAAAACAGCGTCAACAGAAACGCCAGCCAGAACACCGGGAATGAAAAGCCCAGTAAGGCGATGGCGAGGAAAAAGTTAACCTTCCaataaagaccggaaa                                                                                                                                                                   >  1:66406/1‑286 (MQ=255)
                                                                                                                                        cGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAgcg                                                                                                                                                                                                                                                 >  2:28798/1‑220 (MQ=255)
                                                                                                                                        cGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAgcg                                                                                                                                                                                                                                                 <  1:28797/220‑1 (MQ=255)
                                                                                                                                              aCTTCAGTTGTTGGCGCAACCGCCAGGGTGATCACGGGCAATATCATATGGCGGCTTGCGCTCGTGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCACGCATCAATCAACGCAAAACCGTTCATCGGTTTCACTTCGTAGACCAGCTCGCAACAACCTCAAACGGGCAACCAACCTCTGGTGAGTG‑AACAAAACAGCGTCGACCGAAGCGACAGCCAAAACACCGGGAGGGAAAAGCCCAGGAACTCGCTGACAGTGATGAGATGATCACGCAACTTACTGCGCGCAATCACGGcc                                                                                                                                                           >  1:54475/1‑299 (MQ=255)
                                                                                                                                                         tgGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGa                                                                                                                                                                                                                                        <  1:614638/212‑1 (MQ=255)
                                                                                                                                                         tgGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGa                                                                                                                                                                                                                                        >  2:614802/1‑212 (MQ=255)
                                                                                                                                                              cAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGCCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACgggg                                                                                                                                            >  2:139349/1‑299 (MQ=255)
                                                                                                                                                                 ccaaaaGGGTGTTGACGGGCAAAATCATATGGCGGATTCCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGcc                                                                                                                                       <  1:222377/296‑1 (MQ=255)
                                                                                                                                                                 ccGACAGGGTTGTCACGTGCCATATCATATGGCGGTTTGCGCTCCTGAACATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAAACAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACTAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGcc                                                                                                                                       <  1:322427/301‑1 (MQ=255)
                                                                                                                                                                 ccGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCCCGGGGATGcc                                                                                                                                       >  2:284405/1‑301 (MQ=255)
                                                                                                                                                                     gaGGGGGATCAAGGGCAACATCAGATGGCGGATTGCGCTCATGATCATTTCATCCCGGCATGGTGAGTCCGAAAGCCAGGCAGAAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCGTGGGGATgattgcc                                                                                                                                   <  1:349322/300‑7 (MQ=255)
                                                                                                                                                                      aGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAAAAGAAGCGCCAGCAAGACCCCCGGGATTGAAAAGACCCGTACGCCGATGGCGTTGATCAAGGTATGCTGCCACTTATGGCGGGTAATCGCGGCAATCATCACCACGTAGATGCcaaaa                                                                                                                                   >  1:77222/1‑298 (MQ=255)
                                                                                                                                                                       ggtgatacgccggCAATTTCAGATGGCGGATTTCGCTCATGTTCATTTAATCCCGCAATGGTCAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCGTGGGGATgattgccgg                                                                                                                                 <  1:696200/290‑9 (MQ=255)
                                                                                                                                                                       gggTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCcaaaaa                                                                                                                                  >  2:709228/1‑300 (MQ=255)
                                                                                                                                                                            aTCAAGGGCAATATCGTGTGGCGGATGGCGCTCATGATCATTTCATCCCGCCATGGGAAGTCCGAAAGCCAGGCATCAATCAACGCAAAGCGGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTGGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAgcg                                                                                                                            <  1:139302/301‑1 (MQ=255)
                                                                                                                                                                             tCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTAAAACGGGCAACCAACCTAGCGGGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTACCGTGCCAATTAGGGACCTTAACCCCGGCAATCTACCCAACGGGGATCCcaaaacacacccc                                                                                                                           >  1:423125/1‑291 (MQ=255)
                                                                                                                                                                                cGGGCAATATCATATGGCGGATTGCCCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCaaa                                                                                                                        <  1:709030/301‑1 (MQ=255)
                                                                                                                                                                                   acAATAGCCTGTGGGGGATTACACTCAGGATCCTTTCGTCCCGCCGTGGTGAGTCCGAAAGCCAGGCATCAAGCAACGCAAAAACGGTAATCGGTTTCGATTCGTAGAGGAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAAcc                                                                                                                     <  1:624988/300‑1 (MQ=255)
                                                                                                                                                                                        aacatcaggCGGATTGACCTCATTATCATTTCACTCCGCCATGGTGAGTCCGAAAGCCAGGCATAAATCAACGCAAAACCGGTAAGCGGTTTCACTTCGGAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAg                                                                                                                 <  1:284320/293‑1 (MQ=255)
                                                                                                                                                                                            tatGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGACAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGAGTTGATCAAGTTATACTGCCCATTATGGCGCGTAATCCCGGCAATACTCCCCACGGGGATGCCACCAATCAGCCCACAACCAAAGCCg                                                                                                              >  1:202951/1‑299 (MQ=255)
                                                                                                                                                                                                              tGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGAGGCCCAGTTCCAacgg                                                                                          >  1:245779/1‑300 (MQ=255)
                                                                                                                                                                                                              tGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGACAATCATCCCCCCGGGGATGCCAACAACCAGCCCAAAACCGAAGCCGAGGagccccaggcccaccgc                                                                                          >  1:561831/1‑285 (MQ=255)
                                                                                                                                                                                                                 tCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGACAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGATGCACAGTTCCAtcgtcg                                                                                        <  2:203017/300‑1 (MQ=255)
                                                                                                                                                                                                                     ttCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCgg                                                                                    <  2:245858/300‑1 (MQ=255)
                                                                                                                                                                                                                           ccGCCTTGGTGAGCCCGCAAGCCAGGCATCAATCACCGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGGGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGAcc                                                                             <  2:77236/301‑1 (MQ=255)
                                                                                                                                                                                                                                     gAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGAc                                                                              <  2:211585/290‑1 (MQ=255)
                                                                                                                                                                                                                                     gAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATAATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGAGGCACAATGCCATCGTCGCCGGGaaagccggcagga                                                                      >  1:211519/1‑287 (MQ=255)
                                                                                                                                                                                                                                       gTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCTAAACACCCTGAAACGGGCAACCCACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGATATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGCTGCCAACAATCAGCGCAAAACAGAAGACGAGGAGTCACAGTCCCATCGTCGCCCGGAAGACCTCTTTTAAATGt                                                                 >  2:730920/1‑301 (MQ=255)
                                                                                                                                                                                                                                       gTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCCCTTTTAACTGt                                                                 >  1:407982/1‑301 (MQ=255)
                                                                                                                                                                                                                                         ccGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGATGCCCAGTTCCATCGTCGCCGGGCAGACCTCTTTTAACTGTTc                                                               >  2:510642/1‑301 (MQ=255)
                                                                                                                                                                                                                                         ccGAAAGCAAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTAACTGTTc                                                               <  2:561987/301‑1 (MQ=255)
                                                                                                                                                                                                                                                 cAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCAGGCAATCATCCCCACGGGGATGCCAACAATAAGCGCAAAACAGAAGGCGAGGATGAACAGTTCCACCGCCGCAGGGAAGCACACCTTTAACTGTTCGGccaccg                                                       >  1:195717/1‑296 (MQ=255)
                                                                                                                                                                                                                                                 cAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCGGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTAACTGTTCGGCAATCg                                                       <  2:408106/301‑1 (MQ=255)
                                                                                                                                                                                                                                                        caaacaaCGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGACAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTAACTGTTCGGCAATCGGTTGAcc                                                <  1:510498/301‑1 (MQ=255)
                                                                                                                                                                                                                                                            cgaagtgaaaCCGATTACCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGACGGCGAGGATGCACAGTTCCAtcg                                                                                           >  1:28336/8‑254 (MQ=255)
                                                                                                                                                                                                                                                            cgaagtgaaaCCGATTACCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGATGCACAGTTCCAtcg                                                                                           <  2:28337/247‑1 (MQ=255)
                                                                                                                                                                                                                                                                    aaCCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAACAGCCCCGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCGCTTATGGCGCGTAATCCGGGCAATCATCCCCCCGGGGACGCCACCAATCAGCCCAAAACCGAACGCGAGCACGCAAAGTTCCACCGTCCCCGGGAAGAACTCTGTTACCTGGTCGGACATCGGCTGCCCGTTACTGCggg                                     >  1:725498/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                         gTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTAACTGTTCGGCAATCGGTTGACCGTTAATGCTGGAAacac                               <  2:423251/301‑1 (MQ=255)
                                                                                                                                                                                                                                                                            aTCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTAACTGTTCGGCAATCGGTTGACCGTTAATGCTGGAAACACCa                             >  2:606644/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                               ggTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGCTCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAACGCGAGGATGCACAGTTCCACCGTCGCCGGGAAGACCCCATTTAACTGTTCGGACATCGGTTGACCGTTAAGGCTGGAAACACCacaa                          >  1:520591/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                                   gcacggcgcacacccgcacGAAACCCGCAGAAACGGGCAAGAAACCTAGGGGAAGTGCAACAAAA‑AGGTTCAACAGGAGCGCCAGCCCGCACACCGGGATTGCAAAGCCCAGTAAGGCGGTGGCTTTGAGCAAATTATCCTGCCACCTGTGGCGCGTAAGCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGTATGCACAGTTCCATCGTCGCCGGGAAGACCTCTGTTAACTGTTCGGCAATCGGTTGACCGTTAATGCTGGAAACACCAAAATccc                      <  1:18092/282‑1 (MQ=255)
                                                                                                                                                                                                                                                                                    cACTTCGTAGAGCAGAACGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTAACTGTTCGGCAATCGGTTGACCGTTAATGCTGGAAACACCAAAATCCCAg                    <  2:195783/301‑1 (MQ=255)
                                                                                                                                                                                                                                                                                           tAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGATGCACAGTGCCATCGTCGCCGGGAAGAACTATTTTAACGGTTCGTAAAGCGGTTGACCGTTAATGCTGGAACCACCAAAATCCTAATggcca              >  1:114609/1‑297 (MQ=255)
                                                                                                                                                                                                                                                                                            agagCAGATCGAAACAACCTGAAACGGGCAACCACCCTAGCGTGAGTG‑AAAAAACCAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCGAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTAACTGTTCGGCAATCGGTTGACCGTTAATGCTGGAAACACCAAAATCCCAGTGGATCAg            <  2:54485/301‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                      aaaaCACCCTAAAACGGGCAACCAACCCAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTAACTGTTCGGCAATCGGTTGACCGTTAATGCTGGAAACACCAAAATCCCAGTGGATCAGGCCGTTAAAc  <  2:458420/300‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                                        
AGGCGAGGAATAACCGGCGGTAACGCGTTATGCAGAACGTGGCGACGCAAAATAGTAAAGCGCGACAAACCGCGGGTCGCCGCCGCTTTTACATAGTTCTG‑GTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACGCCCTGAAACGGGCAACCAACCTAGCGTGAGTG‑AACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGCAAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTAACTGTTCGGCAATCGGTTGACCGTTAATGCTGGAAACACCAAAATCCCAGTGGATCAGGCCGTTAAAC  >  NC_000913/1354737‑1355330

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A