Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F91 I0 R2
|
42 |
81.4 |
1505765 |
88.3% |
1329590 |
282.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,867,239 |
Δ1 bp |
100% |
coding (313/993 nt) |
rpoS ← |
RNA polymerase, sigma S (sigma 38) factor |
|
| |
seq id |
position |
change |
freq |
score |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,867,239 | 0 | T→. | 100.0%
| 28.0
| 76 | coding (313/993 nt) | rpoS | RNA polymerase, sigma S (sigma 38) factor |
| Reads supporting (aligned to +/- strand): new base (32/34): ref base (3/4): total (37/39) |
| Fisher's exact test strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.87e-01 |
GTTGCTCTGCGATCTCTTCCGCACTTGGTTCATGGTCCAGCTTATGGGACAACTCACGTGCGGTTCGCAGGTAAACGTTCAGCTCCTTTACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTCCCTGCGATAACAGTTCCTCTTCGGCCAAATCGTTATCACTGGGTTCCTGTTCTACTAAGGCCTTTTCGTCAAAAACCTCAACTCCGTTCTCATCAAATTCCGCATCTTCATTTAAATCA > NC_000913/2866948‑2867525
|
gTTGCTCTGCGATCTCTTCCGCACTTGGTTCATGGTCCAGCTTATGGGACAACTCACGTGCGGTTCGCAGGTAAACGTTCAGCTCCTTTACGATGTGACTCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAACCGTCTGGCGAATCCACCAGGTTGCGAATGTTACGAAGCGGAAACCACGTTCCGGGGTAAACTTCTCTACCGCGCGGCCACGCCCCAGGTTGCCCTCTTCGATACGGCCCCGCAACGCCAGACCCCGGCTGCCTTAACGCCCGGAAAttttccccc > 2:75066/1‑295 (MQ=255)
ctcagagatgtgtatgagagacatgcgtATGGGACATCGCACGGGCGGTACGCAGGTAAACGTTCAGCCCCTTCACCATGTGAATCGGCAAACGAATAGTACGGGTTTGGGTCATAATCGCCCGTGCAATCGTCTGGCGCATCGACCATGTTCCGTATGTTGAGAAGCGGAACCCACGTTCCAAGTCAAACTTCTCTACCGCGAGGATCAGCACCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTActc < 1:286997/274‑1 (MQ=255)
ctTCCGCACTTGGTTCATGGTCCAGCTTATGGGACAACTCACGTGCGGTTCGCAGGTAAACGTTCAGCTCCTTTACGATTTGAATCGGCAAACGCATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCCCCAGCTTGCGTATGTTGAGAAGCGCAAACCACGTTCCGCGTCAAACTTCTCTACCGCGCGGACCATCACCCGGCTCCCCTCTGCGATAAGGTCCAGCAACGCCAGACCACGATCCCCATACCGGCGGGCAAttttacccctcacagcaaagcctc > 2:401679/1‑280 (MQ=255)
ccACTTGGTTCATGGTCCAGATTATGGGAAAACCCTAGTGCGGTTCGCAAGTAAACGTTCAGCTCCTTTACGCTGTGAATCGGCAAACGAAGAGTACGGGGTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGat < 1:372179/300‑1 (MQ=255)
ggTTCATGGTCCAGCTTATGGGACAACTCACGTGCGGTTCGCAGGTAAACGTTCAGCTCCTTTACGATGTGAATAGGCCAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGAGAATCCACAAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATCGGGTCCAGCAACGCCAGACCGCCATTGCCATAACGGCGGGC‑ACTTTTCCCAACAGACGCAAGTTAATCCCCattatcag > 1:442228/1‑299 (MQ=255)
gTTCATGGTCCAGCTTATGGGACAACTCACGTGCGGTTCGCAGGTAAACGTTCAGCTCCTTTACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCAGTTCAATAGTCTGGCGAATACACAAGGTTGCGTATGTTGAGAAGCGGAAAACACGTTCCGAGTCAAACTTCTCTCCAGCGCTGTTCAACCCCAGGTTCCCCTCTTCAATACGGGCCATACACGCCAGACCTCGATTAACATACTGGCGGGCAA‑TTTGACCAACAGTCGCAAGTGACTCACCatcagcgtg > 1:468586/1‑296 (MQ=255)
gCTTATGGGACAACTCACGTGCGGTTCGCAGGTAAACGTTCAGCTCCTTTACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGACGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACTCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCCGACGCAAGTTACTCTAGATCCTCCGGCGGCGAGAGGCg > 1:401587/1‑301 (MQ=255)
gCTTATGGGACAACTCACGTGCGGTTCGCAGGTAAACGTTCAGCTCCTTTACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCCGCCCCAGGTTGCCCTCTTCGATAAGGTCAAGCAACGCCAGCCCGCGCTTCGCCTCACGGCCGGCCA‑ATTTACCACCAGCCCCCAGTTaacccttttccttctacacctacaccg > 2:286991/1‑274 (MQ=255)
tATGGGCCAACGCACGTGCGGTTCGCAGGTAACCTTTAAGCTCCTGTACTATGTGAATCGGCAAACCAATAGTACGTGTTTGTTTCATAATCGCCCGTTCAATCGTCTGGCGCATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACa < 1:145980/301‑1 (MQ=255)
gACAACTCACGTGCGGTTCGCAGGTAAACGTTCAGCTCCTTTACGATGTTGATCGGCAAACGAATAGGACGGGTTTGGTTCATAATCGCCCGTGCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAt‑ctc < 1:244179/300‑1 (MQ=255)
gACAACTCACGTGCGGTTCGCAGGTAAACGTTCAGCTCCTTTACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTT‑ATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCACCGCCAGCCCACGATTGCCATAACGCCGGGC‑ACTTTTACCACCCAACGCAAGTTCCGCTCGATCATCCGCCGGCGAGAGGCGACCT‑CTCCa > 2:637885/1‑301 (MQ=255)
cTCACGTGCGGTTCGCAGGTAAACGTTCAGCTCCTTTACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCCACGCCCGACCACGATTGCCATAACGGCGGGCCA‑TTTTACCACCAGCCGCAAGGTACACTCGACCACCCGGCCGCGACAGGCGACCT‑CCCCCCGCa > 2:605620/1‑301 (MQ=255)
tgaCGTGCGTTTCGCAGGTAAACGTTCAGCTCCTTTACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAg < 1:502271/299‑1 (MQ=255)
gTTCGCAGTGCAACGCTCAGTACCTCTACTATGTGAATCGGCAAACGCAGAGTACGGGTTTGATGCATACACTCCCGGTCAAGCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGCAAACCACGTGCCGGGTCAAACTCCTCTACCGCGCTGATCAGCCCCAGGTGGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCATACGCAAGTTACTCTCGATCATCCGGCGTCGAGATGCGACAT‑CTCCACGCAGTGCGCGAc < 2:158059/300‑1 (MQ=255)
gTTCGCAGGTAAACGTTCAGCTCCTTTACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGACGCGGAAACCACGTTCCGTGTCCAACGTCTCTACCGCGCGGCTCAGCCCCTGTTTGCCCTCTTCGATAAGGTCTAGCACCGCCAGCCCACGATTCCCATACACGCGGGCAA‑TTTGACAACCAGACGCCACGTCCCCGCGTACCTCCGGAGGCGCGAGGCCACGT‑CTCCAcaccagtcgcaca > 2:494362/1‑288 (MQ=255)
ggTAAACGTTCAGCTCCTTTACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAACCTTCTCTACCGCGCGGATCAGCCCCAGGCTGCCCTCTTCGCTAAGGTCCAGCACCGCCAGACCACGATTGCCATAACGGCCGGCAA‑TTTTACCCCCAGACGCAAGTTACTCTCGATCATCCGCCGGCGAGCGGCCACAC‑CTCCCCCCAGTTCGCGCCGCCCcaaa > 2:432741/1‑301 (MQ=255)
ggTAAACGTTCAGCTCCTTTACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTAATAATCGCCCGTTAAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTATCTACAGAGGGGATCAGCACCAGGTTGCCCTCTTCGATACGGTCAAGCAACGCCAGACCACGATTGCCCTAACGGCGGGCAA‑TGATAGCACCAGACGCCAGTTACTCTCGATCATCCACAGGCGAGAGGAGACGT‑CTCCACGCAGCGCGCGCCGCGCcaaa > 1:580810/1‑301 (MQ=255)
gTAAACGTTCAGCTCCTTTACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTAACGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTCCCACCAGAAGCAAGTTCCTACCGctcatca > 2:143436/1‑255 (MQ=255)
aaggtCAGTTCCTTTACGATTGGAATCGGAAAAAGAATCGTCCGGGGTTTGGT‑ATAATGGCCCGTCCAATCGTCTGGCGAATCCACCAGGTTGCGGATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTGCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAAct < 1:637911/297‑1 (MQ=255)
ggtcaggacatttAAGATGTTAATAGGCAAACGAAGAGAGCGGGTGTGGGTAATAATAGACCGTTGAATAGACGGGCGAATCAACCAGGTTGCGTATGGTGCGAAGCGGAAAACACGTTCCGGGTCAAACTGCTCTACGGCGCGGATCAGCCCCAGGTTGACCGCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAAc < 1:619314/289‑1 (MQ=255)
gCTCCTTTACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTTCGCGCCGCGCAAAATAAActtctt > 1:426054/1‑299 (MQ=255)
cTCTTTTACGAGGTGAGTCGGCAAAAGAATAGGAGCGGTTGGGTTACGAATCGCCCGTTAAATCGGCTGGCGAATCCACCAGGGGGAGTAGGTTGAGAAGCGGAAACCACGGTCCGGGTCAAAATTGTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTACCATAACGGCGGGCAA‑TGTTACCACCAGACGCAAGTTACGCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAActtcttc < 2:521979/299‑1 (MQ=255)
ccTTTACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCCGACGCAAGTTAACCTACATCATCCGGCGGCCAGCAGCGACAT‑CTCCACGCAGTGCGCTCCGCCCCAAATAAACttcttcttc > 2:131940/1‑300 (MQ=255)
tagtACGATGTGAAGTGGCGAACGAATAGTCCGTGTGTTCTTCATAATCGCCAGGTCTACCGTCTGGGGAACCAACCAGGTTGCGTATGGTGGGAACGGGAAACCCCGTTCCGGGTCAAACTTCTCTCCCGCGCGGATCAGCCCCAGGTTGCCCTCTGCGATAAGGTCCAGCAACGCCAGACCACGATTGCCAGAACGTCGGGCAA‑GTTTACCCCCAGCCGCAAGTTACTCTCGAGCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCgg < 2:189491/298‑1 (MQ=255)
tttACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCCCCAGACGCAAGTTACTATCGCTCCTCCGGCGGCGAGCGGCGACCT‑CTCCCCGCAGTGCCCCACCCCCAAATTAACCTTCTTCTTCgg > 2:735985/1‑300 (MQ=255)
gttaagcGGTAAACGAATAGTACGGGCTTGGTGCATAATCGTCCGTTCAATCGTCTGTCGAATCCACCAGGTTGCGTATGTTGAGCAGCGGAAACACCGTTCCGGTTCAAACTTTTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAAc < 1:254468/294‑1 (MQ=255)
gtgAATCTGCAAACGAATAGTCCGGGTTTGGTTCCTAATCGCCCGTTCAACCGTCGGGCGAATCCACCATGCTGCGTATGTTGAGAAGCGGAAACCACGTTCCGCGTCAAACTTCTCGACCGCGCGGATCAGCCCGAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAAc < 1:736012/300‑1 (MQ=255)
gaacgggCAAACGAAAAGTAAGGGTTGTGTTCAGAAGCGCCCGTGAAAGCGTCTGGCGAATCCACAAGGTTGCGGAGGTTGAGAAGCGGAACCCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAg < 2:242082/295‑1 (MQ=255)
aaCGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCCA‑ATTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCCAGAGGCTCACT‑CTCCACCCAGTGCGCGCCGAGCCCAACAAACATCTTCTTCGGCCGTTAAACgtgggtcacaa > 2:611988/1‑294 (MQ=255)
aggtgTACGGGGTTGTTTCATAATGCCCCGTTCGACGGTGGGGCGAATCACCCAGGTTGTGTATGTGGAGAAGGGGAAACCACGTGCCGGGTCAAACTGCTCTACGGCGCGGATCACCCCCAGGTTGCCCTCGTCGATAAGGTCCAGCAACGGCAGACCACGAGTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACGCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCa < 2:270404/296‑1 (MQ=255)
tAGTACGGGTTTGGTTCATAATCGCCCGTTAAATCGTCTGGCGAATCCACCATGTGTCGTAGTTTGAGAAGCGGAAACCACGTGCCGGGTCAAACGTCTCTACCGCGCGGAGCAGCCCCATGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAAtc < 2:401576/301‑1 (MQ=255)
ttACGGGTTTTGTTCATAAGCGCACGTTCAATCGTCTGGCGAAGCCACCAGGTTGCGTATGTGGAGAAGCGGAAACGCCCTGCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAAtctc < 2:460401/300‑1 (MQ=255)
gTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCGTCGATAAGGTCCAGCCACGCCCGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTACATCCTCCGGCGGCGAAAGACG‑CATCCTCCACCACGTTCACCACCCGCAAAATCACCTTCTTCTTCGGCCGTTAACCGTGGTGCATAAcccaacaa > 2:669286/1‑295 (MQ=255)
ggTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGCGGCGACAT‑CTCCCCGCAGTGCGCGACGCGCAAAATACACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCCCACCa > 2:269042/1‑301 (MQ=255)
ttGGTTCAGAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTGGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGTAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGt < 1:387600/301‑1 (MQ=255)
tCATAATCGCCCGTTCAAGCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTCCCGGGTCAAACTTTCCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGc < 1:75070/301‑1 (MQ=255)
tCAAAACCGCCCGTTCACTCGTCGTGCGAATCCACCAGGTTGCGTAGGTGGAGAAGCGGAAACCACTTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCACGCTGCGATAAGGTCCAGCAACGTCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTGCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGc < 2:582731/301‑1 (MQ=255)
cATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCCTCCGGCGGCGAGAGGCGCCAT‑CTCCACGCAGTGCCCGACGGGCACAATAAACTTCTTCCTCGGCCGTTAACCGTGGTGAATACCCAATCTCCCCCAGGTaaacc > 2:629686/1‑298 (MQ=255)
aacgtcgtgCGAATCCACCAGGTGGCGTATGGTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGCATCAGCCCCATGTTGCCCTCTTCGATAAGGTCAAGCAACGCCAGACCACGAGTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACGCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAacac < 1:428048/293‑1 (MQ=255)
cTGGTGAATCCACAAGGGTGGGTATGATGAGAAGCGGAACCCACGTTCAGGGTCAAACTTCTGTACACTGCGGATCAGGCCCAGTTTGGCATCTGCGAAAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGGGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGAGCATCCGGAGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGACGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGc < 2:97215/301‑1 (MQ=255)
accggccaGGTGGCGTATGTTGCAGAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGc < 1:131946/296‑1 (MQ=255)
ccaccaGTTTGCGTAGGGTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGTTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCAGACCGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTc < 1:629711/301‑1 (MQ=255)
ccaccaGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGCTTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCCACAG‑CTCCCCGCAGTCCGCGACGCGCAAAATAAACTTCTTCTTGGGCCGTTAACAGTGGGTGATAACCAATCTCACCAAGCTAAAGCTTAGTCGCGTCCAAACAACCCTGCGTGGCt > 2:532424/1‑300 (MQ=255)
ccaccaGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGCCAT‑CTCCCCGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATACCCAATCTCACCAAGGTAAAGCTGAGTCGCGCCCAaccacccctgtttcgc > 2:83166/1‑286 (MQ=255)
ccaccaGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCa < 1:75924/253‑1 (MQ=255)
ccaccaGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGc < 1:460219/270‑1 (MQ=255)
cGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCCAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCTTCCAACACACGCTGTGTGGCTCCCTGCGATaa > 1:17269/1‑300 (MQ=255)
caTGTTGAGAAGCGGAAACCCCGTCCCGGGTCAACCCTCGCGAACGCGCGGATCAGCCCCAGGTTGCCCTCGTCGATAAGGTCCAGCAACGCCAGACCACGAGTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCTGCTAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTCCCTGCGATAACAg < 1:196207/300‑1 (MQ=255)
aTGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCACCGCCAGACCACGATTGCCATACCGGCGGGCAA‑TTTTACCACCCGACGCAAGTTACTCTCGATCATCCGTCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATCAACTTCTTCTTCGTCCGTTAACAGTGGTTCATACCCAATCTCACCCAGGTAACGCTACGTCGCTGCCAACCCACGCCGTGTACCTCCCTCCCAAAACa > 2:71170/1‑299 (MQ=255)
ttGAGAAGCGGAAACCCCGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCGCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTCCCTGCGATAACAGTTcc < 2:426043/301‑1 (MQ=255)
gaAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGTCCTCTTTTATAAGGTTCAGCAACGACAGACCACGATTGCCATCACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAgtgg < 1:84974/221‑1 (MQ=255)
ttCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAG‑CTCCACGCAGTGCGCGACGCGCCAAATCAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAACGCTGAGTCCCGTCCAACCCAAGCCGGGTGGCCCCACGCGATACCCGTTCCTCGTCGGCCAAACCGtttt > 2:84172/1‑299 (MQ=255)
gggTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACAACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCAACGCAGTGCGCGACGCGCAAGATAAACTCCTTCTTCGGCCCTTAACAGTGGTGAATAACCAATCTCCCCAAGGTAAAGCTGAGTCGCGTCCAACACACGATGTGTGGCTCCCTGCGATCCAACTTCATGTTCGGCCAAATCTTTacac > 1:687119/1‑296 (MQ=255)
ggTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCCACAAGGTAAAGCTGAGTAGCGTCCAACACACGCATGGTGGCCCCCTGCGATAACAGTTcccttgctcttatacacacccgacg > 2:142443/1‑277 (MQ=255)
ggTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTCCCTGCGATAACAGTTcc < 1:142449/277‑1 (MQ=255)
cctctcTAACGCGCGGATCAGCCCCAGGTTGACCTCTTCGATAAGGTCCAGCACCGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTGTACCACCAGACGCAAGTGACTCTCGATCAGCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCtg < 1:647176/243‑1 (MQ=255)
tctACCGCCCGGATCAGCCCCAGGTTGCCCTTTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTCCCTGCGATAACAGTTCCTCTTCGGCCAAATCGTTATCACTGGGTTCCTGtt < 1:269048/301‑1 (MQ=255)
tctACCGCAGGGGTCAGCCACAGGTTGCCCAGTTCAACAAGGTCCAGCAACTACAGACCACGCTGGCCATCACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTGCCGATCAGCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAAGAAACTTCTTCTGCGGCCGTTAACAGTGGTGAATAACCAAGCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTCCCTGCGATAACAGTTCCTCTTCGGCCAAATCGTTATCACTGGGTTCCTGTTc < 2:150965/301‑1 (MQ=255)
ctACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTCCCTGCGATAACAGTTCCTCTTCGGCCAAATCGTTATCACTGGGTTCCTGTTc < 1:83170/301‑1 (MQ=255)
cgcgcgGATCAGCCCCAGGTTGCCCTCTTCGAGCAGGTCCAGCAACGCCAGACCACGATTGCCAGAACGGCGGGCAA‑TTTTACCACCAGACGCAAGGTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTCCCTGCGATAACAGTTCCTCTTCGGCCAAATCGTTATCACTGGGTTCCTGTTctacta < 1:401690/301‑1 (MQ=255)
gcgcgGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAACATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCCAGGTAAAGCTGAGTCGCTTCCACCACACGCTGTGTGGCTCCCTGCGATAACAGTTCCGCttt > 1:215195/1‑264 (MQ=255)
gATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTCACAGTGGTGAACACCCAATCCCACCAAGCTAAAGCTTAACCGCGTCCACCACACGCTGTGTGGCTCCCTGCGATAACAGTTCACCTCCCGCCAAACCGTTACCCGTGCGTTCCCGTTccaccacgcc > 2:362889/1‑293 (MQ=255)
gCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCCAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTCCCGGCGATAACAGTTCCTCTTCGGCCAACTCATTATCACTGGGTTCCTTTTCTACTAAGGCCtttt > 1:583808/1‑300 (MQ=255)
gCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGAGACGCGCAAAATAACATTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCCAGGTAAAGCTGAGTCGCGTCCAACACACGCTGAGTGGCTCCCTGAGATAACCGTTCCTCTTAGGCCAAATCGTTATCACTGGGTTCCTGTTCTACTAAGGACTTTTCg > 1:91987/1‑301 (MQ=255)
ctctTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGCTCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGCCGCGCAAAATAAACTTCTTCTTCGGCCGTTAACCGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGAGTCCAACACACACCGTGTGGCCCCCTCCCATAAACGTTCATCTTTGCCCAACTCTCTCGCCCTTGTGTCCTGTTCTACAAACGCCTTGTCTTCACAAAACTCaa > 2:748569/1‑301 (MQ=255)
ttCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTCCCTGCGATAACAGTTCCTCTTCGGCCAAATCGTTATCACTGGGTTCCTGTTCTACTAAGGCCTTTTCGTCAAAAACCTCAACTc < 1:612012/301‑1 (MQ=255)
tCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACCGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGATGTGTGGCTCCCTGCGATAACAGTTCCTCTTCGGCCAAATCGTTATCACTGGGTTCCTGTTCTCCTAAGCCCTTTTCGCCAAACACCCCaccac > 2:18454/1‑296 (MQ=255)
cGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCCCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTCCCTGCGATAACAGTTCCTCTTCGGCCAAATCGTTATCACTGGGTTCCTGTTCTACTAAGGCCTTTTCGTACACAACCTCAACTcc > 2:308051/1‑300 (MQ=255)
taatggccAGCCACGCCAGACAACGAGTTCCATAACGGCGGGCAA‑TTTGACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACTCGCAAAATAAACGTCGTCGTCGGCCGTTAACAGGGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTCCCTGCGATAACAGTTCCTCTTCGGCCAAATCGTTATCACTGGGTTCCTGTTCTACTAAGGCCTTTTCGTCAAAAACCTCAACTCCGTtc < 1:71174/295‑1 (MQ=255)
ggccAGCAACTCCAGACCACGATTGCCATAACGGCGGGCAA‑TCTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGGTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCt < 2:162636/176‑1 (MQ=255)
gTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑ATCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCCATCTCACCAAGGTAAAGCt > 1:162643/1‑178 (MQ=255)
cGATTGCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTCCCTGAGATAACAGTTCCTCTTCGGCCAAATCGTTATCACTGGGTTCCTGTTCTACTAAGGCCTTTTCGTCACAAACCTACACTCCCTTCTCATCAAATTCCGCATATTCCtt > 1:235513/1‑301 (MQ=255)
agtGCCATAACGGCGGGCAA‑TGTTACCACCAGACGCAAGGTACTCGTGATCATCCGGCGGCGAGAGGCGACAG‑CTCCACGCAGTGCGCTACGCGCAAAATAAACGTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGTTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTCCCTGCGATAACAGTTCCTCTTCGGCCAAATCGTTATCACTGGGTTCCTGTTCTACTAAGGCCTTTTCGTCAAAAACCTCAACTCCGTTCTCATCAAATTCCGCATCTTCAttt < 1:432752/298‑1 (MQ=255)
gCCATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTCCCTGCGATAACAGTTCCTCTTCGGCCAAATCGTTATCACTGGGTTCCTGTTCTACTAAGGCCTTTTCGTCAAAAACCTCCACTCCGTTCCCATCCAATTCCCAATCTTCCTTTAAAt > 1:412371/1‑301 (MQ=255)
ccATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCACAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGTATAACCAATCTCACCACGGTAAAGCTGAGTCGCGTCCGACCCACGCTGTGTGGCTCCCTGCGCTAACAGTTTCTCTTCGGCCAAATCGTGTGCACTGGGTTCCTGTTGTACTAAGGCCTTTTCGTTCACACCACCCAATCCCTTAGCCTCACATTCCCCATCTTCATTTaacc > 2:560584/1‑298 (MQ=255)
ccATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCAAGCAATGCGCGAAGCGCAAAAGAAACTTCTTCTTAGGCCGTTAAAAGTGGTGAATAACCAATCTAAACAAGGTGAAGATGAGTCGCGTCCAACACACGATGTGTGGCTCCCTGCGATAACGTTTCATCTTCGGCAAAATAGTTATCCGTGGATTCAAGCTCTACGAAGGGCTTTTCGCAACAAACCTCAACACAATTCTCATAAAAGACCTCATATTACTTTaacaa > 1:465019/1‑298 (MQ=255)
cATAACGGCGGGCAA‑TTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTTTGGCTCCCTGCGATAACAGTTCCTCTTCGGCACAATCGTTATCCCTGGGTTCCTGTTCTACTAACGCCTTTTCGTCAAACACCTCAACTCCGTTCTCATCACATTCCGCCCTTTTATTTAAATCa > 2:724400/1‑301 (MQ=255)
aacgggggGAAATTGTACCACCAGACGCAAGTTACTCTCGACCATCCGGCGGCGAGAGGCGACAT‑CGCCACGCAGGGCGCGACGCGCAAAATAAACTTCTTCGTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGGCGCGTCCAACACACGCTGTGTGTCTCCCTGCGATAACAGTTCCTCTTCGGCCAACTCGTTATCACTGGGTTCCTGTTCTACTAAGGCCTTTTCGTCAAAAACCTCAACTCCGTTCTCATCAAATTCCGCATCTTCATTTAAATCa < 1:513569/293‑1 (MQ=255)
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GTTGCTCTGCGATCTCTTCCGCACTTGGTTCATGGTCCAGCTTATGGGACAACTCACGTGCGGTTCGCAGGTAAACGTTCAGCTCCTTTACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAT‑CTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTCCCTGCGATAACAGTTCCTCTTCGGCCAAATCGTTATCACTGGGTTCCTGTTCTACTAAGGCCTTTTCGTCAAAAACCTCAACTCCGTTCTCATCAAATTCCGCATCTTCATTTAAATCA > NC_000913/2866948‑2867525
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
