Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F9 I0 R1 113 83.2 1840812 91.6% 1686183 224.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,931,522 A→C 12.3% T70P (ACC→CCC)  kup → potassium transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,931,5220AC12.3% 247.0 / 4.5 98T70P (ACC→CCC) kuppotassium transporter
Reads supporting (aligned to +/- strand):  ref base A (52/28);  new base C (2/13);  total (54/44)
Fisher's exact test for biased strand distribution p-value = 3.25e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 101 total aligned reads displayed.

ACATTTCATATTTCAACGAAAGACTAGTCTATGAGCACTGATAATAAGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCGCAGCTGGATACCTGGATAGTTCCCCTCTCAAT  >  NC_000913/3931285‑3931757
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                             
ccaTTTAATATTTCAACTAAAGACTAGCCTAAGGACCCTGATAATAAGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CAc                                                                                                                                                                                                                                              <  1:583310/238‑1 (MQ=255)
acaTTTCATATTTCAACGAAAGACTAGTCTATGAGCACTGATAATAAGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATGGCGGGTCTTCTGGGTGCAAATCTTTGTGGTTTCCATTAAAAATCT‑Ca                                                                                                                                                                                                                                               >  2:12737/1‑238 (MQ=255)
acaTTTCATATTTCAACGAAAGACTAGTCTATGAGCACTGATAATAAGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑Ca                                                                                                                                                                                                                                               >  1:90302/1‑238 (MQ=255)
      cATATTTCAACGAAAGACTAGTCTATGAGCACTGATAATAAGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGGGGTTTCCTTTAAATATCT‑CACCTTCGt                                                                                                                                                                                                                                        >  1:247690/1‑239 (MQ=255)
          tttCAACGAAAGACTAGTCTATGAGCACTGATAATAAGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGGGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGGGGTTTCCATTTAATATCT‑CACCTTCGTGAtt                                                                                                                                                                                                                                    >  1:305783/1‑238 (MQ=255)
              aaCGACAGACTAGTCTATGAGCACTGATAATAAGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGGTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTCTTATCGCTGATCTTTTGGTTGCCAACATTTGGGGTTTCCATTAAACATTT‑AACCtatgtaatagggg                                                                                                                                                                                                                                >  2:281835/1‑227 (MQ=255)
                             tttgacgattgttattaaGCAATCTTGGCCCGGGATTGCCCTCGGGGCGATTGGAGTGGTCTACGGCGATATTGGTACCAGCCTGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTGTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑Tg                                                                                                                                                                                                                <  2:247690/224‑1 (MQ=255)
                                gatcACTGATAATAAGCAATCATTGCCCGCGATTTCCCTCGCGGTGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACTCTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTGTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑gg                                                                                                                                                                                                            <  1:69445/236‑1 (MQ=255)
                                    aCTGATAATAAGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAAAGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTCAATATCT‑Ca                                                                                                                                                                                                                                               >  1:761488/1‑202 (MQ=255)
                                       gATAATAAGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGa                                                                                                                                                                                                      >  1:428369/1‑238 (MQ=255)
                                        ataataAGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCg                                                                                                                                                                                                                    >  2:477018/1‑225 (MQ=255)
                                        ataataAGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCg                                                                                                                                                                                                                    <  1:477018/225‑1 (MQ=255)
                                              aGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTGTATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCCTTAAATATCT‑CACCTTCTTGATGCGGGCAGATAACGCCGG‑GGG‑GGGGGGGATCCGGACg                                                                                                                                                                                              >  2:368914/1‑239 (MQ=255)
                                                cAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTATATATCC‑CACCTTCGTGGTCCGGGAAGATAACCCCGG‑GGA‑gggggggcaccctagtgt                                                                                                                                                                                            >  2:79904/1‑228 (MQ=255)
                                                  aTCATTGCCCGCGATTACCCTCGCGGCGGTTGGAGTTGTCTACGGCGCTATTGGTCCCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAACCTTTGGGGTTTCAATTCAA‑ATCTCCACCTTCGTGATGCGGCCAGATAAAGCCGG‑CGA‑GGGGGGGTGCCTGACGTTGa                                                                                                                                                                                          >  2:528461/1‑239 (MQ=255)
                                                  aTCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCCGTTAAGCCCGG‑TGA‑GGGGGGGACCCCGACGTTGa                                                                                                                                                                                          >  1:829789/1‑239 (MQ=255)
                                                   tCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACCCGATGCCGGGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGGGGTTTCCATTAAATATCT‑CACCTTCGTGTTGCGGGCAGATAACGCCGT‑TGG‑GGGGGGGATCCTGCCGtttgt                                                                                                                                                                                         >  2:739391/1‑236 (MQ=255)
                                                             gtaTTACCCCGGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATCCCCTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGcc                                                                                                                                                                               <  1:12737/237‑1 (MQ=255)
                                                             cgATTCCCCCGGCGGGGATTGGGGTTGTCTACGGCGATATGGGTTCCCGCCCGTTATATGCACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGcc                                                                                                                                                                               <  1:469627/239‑1 (MQ=255)
                                                              gATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGACTGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATAGCTGATCTTCTTGCTGCTAATCTTTGGGGTTTCCATTAAATATCT‑CACCTTCGTTATGCGGGCAGCTAACGCCGGTTGG‑GGGGGGGACCGTG‑CGTTGAAGTCGCCTGCCg                                                                                                                                                                              >  2:32432/1‑239 (MQ=255)
                                                                 ttcccTCGGGTCGATTGGAGTTGTCTACGGCGATTTTGGTACCAGCCCGTTATATTCCCTTCGTTAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCggg                                                                                                                                                                            <  1:858748/236‑1 (MQ=255)
                                                                   cccTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGCTGTCGCTTGCCGGGCgg                                                                                                                                                                         >  1:813719/1‑238 (MQ=255)
                                                                        gcggcgATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGACCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGG‑GGGGGGGATCCTGACGTTGATTCCCCTTGCCgggggaaaaag                                                                                                                                                                    >  2:361211/1‑231 (MQ=255)
                                                                                         ctcgggCGATTGTGGTACCGACCCGTTATATACACTTCGTGAATTTTTGGCCGGCCAGTTTGGTTTAGGCGTTGAACGCGATGCCGGGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACAt                                                                                                                                                   <  1:553453/235‑1 (MQ=255)
                                                                                         cTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACAt                                                                                                                                                   <  1:910534/239‑1 (MQ=255)
                                                                                              gCGTTATTGGTTCCAGCCCTTTATATTCCCTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTGTAACGCGTTGCCGTGTTTGGCTTTTTAGCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGTCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATg                                                                                                                                              <  2:372027/239‑1 (MQ=255)
                                                                                                  tatTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑ACCCTTCGTGATGCGGCCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATTTCGCTTGCCCGGCGACATACGTCGCCGCGAACCCAACCAATGCggg                                                                                                                                          >  2:553453/1‑239 (MQ=255)
                                                                                                         ccccgCCTGTTTTTTACACTTGGTGAATGTTTGTCCGGCCATTTTGTTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTAt                                                                                                                                   <  2:525260/235‑1 (MQ=255)
                                                                                                            aGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATggg                                                                                                                                >  1:840249/1‑239 (MQ=255)
                                                                                                              cccGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGGGATGCGGGCAGTTAACGCCGG‑TGA‑GGGGGGGTTCCTTACGTTACTGTCGCTTTCCGGGCGCAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATgggg                                                                                                                               >  1:477913/1‑238 (MQ=255)
                                                                                                                  ttATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTaa                                                                                                                           >  1:642126/1‑238 (MQ=255)
                                                                                                                  ttATATACACTTAGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGCAATACGTCGGCCCGAACCACATCAATGCTGGTGCTTATGGGGGTag                                                                                                                           >  1:686845/1‑237 (MQ=255)
                                                                                                                   tatataCACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGAGGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTAGGCGCGAACCAACTCAATGCTGGGGATTATGGGGCTAATc                                                                                                                         >  1:134178/1‑239 (MQ=255)
                                                                                                                       taCACTTTGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATcggcg                                                                                                                     <  1:368914/239‑1 (MQ=255)
                                                                                                                        acccTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGCGTTTGTCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CCACTTCGTGATGCGGGCAGATAACGCCGG‑TGG‑GGGGGGGCTCCTCACGTTAATGTCGCTTCCCGGGCGGGATACGGGGGGGCGAACCACGTCAAAGCTGGGGGTTGTGGGGGTAATcggcgg                                                                                                                    >  2:605154/4‑239 (MQ=255)
                                                                                                                          acTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGGTCCTGACGTTGATGTCGCTTGCCGGGCGAAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCa                                                                                                                  >  1:432840/1‑239 (MQ=255)
                                                                                                                            ttCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGCTGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTTCCGGGCGGAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATcggcgggcgg                                                                                                                >  2:888850/1‑235 (MQ=255)
                                                                                                                            ttCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGGTTGCCGGGCGTCAAACGTGGGCGCGAACCACATCACGGCCGGGGATTATGGGGCGAAAcggcggac                                                                                                                  >  2:768147/1‑235 (MQ=255)
                                                                                                                            ttCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGGGGGACCCAAATCAAGGCGGGGGATTATgggggaaaccgggggggcg                                                                                                                >  2:383879/1‑224 (MQ=255)
                                                                                                                              cGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCGGCtt                                                                                                              >  1:230090/1‑239 (MQ=255)
                                                                                                                              cGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCtt                                                                                                              >  1:733558/1‑239 (MQ=255)
                                                                                                                               gTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATa                                                                                                                                                                                                                          <  2:1983/132‑1 (MQ=255)
                                                                                                                               gTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATa                                                                                                                                                                                                                          >  1:1983/1‑132 (MQ=255)
                                                                                                                               gTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCttt                                                                                                             >  1:515921/1‑239 (MQ=255)
                                                                                                                               gTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TAC‑GGGGGGGATCCTTACGTTGATGTCGCTTGCCGGGCGTAATTGCACGGCGGGAACAACACAAATGCTGTGGATTTTGGTGCTAATCGGGGGCGGCttt                                                                                                             >  2:813254/1‑239 (MQ=255)
                                                                                                                                 gAATGTTTTTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCttttt                                                                                                           <  1:739391/239‑1 (MQ=255)
                                                                                                                                      tttGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGAGGGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGGGATTATGGGGCTAATCGGCGGCAGCTTTTTCttt                                                                                                       >  1:744854/1‑237 (MQ=255)
                                                                                                                                         ttcctggctgTTTGGTTTTGGTGTTGAACCGGTTTCCGTTTTTGTCTTTTTATCTCTGTTCTGCGGGCTGCTATACTTTGTGGTTTCCATTAAATTTCT‑CTCCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTg                                                                                                   <  2:829789/230‑1 (MQ=255)
                                                                                                                                         gTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTg                                                                                                   >  1:453182/1‑239 (MQ=255)
                                                                                                                                           ccGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CCCCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGaa                                                                                                 <  1:316629/239‑1 (MQ=255)
                                                                                                                                             ggCCAATTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CCCCGTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAgt                                                                                               <  1:281835/239‑1 (MQ=255)
                                                                                                                                             gcctaGTTTGTTTTTGGCGTTGAACCGGGTGCCTTTGTTGGCTTTTTATCGCTGATCTTCTGGCTGGTAATCTTTGTGGTTGCCATTAAATATCT‑CACCTTCGGGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAgt                                                                                               <  2:230090/235‑1 (MQ=255)
                                                                                                                                              gCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGa                                                                                                                                                                                                                            >  1:297242/1‑115 (MQ=255)
                                                                                                                                              gCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGa                                                                                                                                                                                                                            <  2:297242/115‑1 (MQ=255)
                                                                                                                                                  ttttGGTTTTGGCCTTGAACGCGTTGCCTTGTTTGGGTTTTTATCGCTTATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CCCCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCa                                                                                          <  2:840249/238‑1 (MQ=255)
                                                                                                                                                         tttGGCGTGTAACGCGTTGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGGTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACAcc                                                                                   <  2:43790/239‑1 (MQ=255)
                                                                                                                                                          ttggttttGAACGGGTTTCCGTGTTTGCTTTTTTATCCCTGATCTTCTGGCTGCTAATCTTTGGGGTTTCACTTAAATATCT‑CCCCTTGGTGATGCGGGCAGATAACGCCGG‑GGAGGGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACAcc                                                                                   <  2:744854/233‑1 (MQ=255)
                                                                                                                                                           tGGGGTTTAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCg                                                                                 <  1:361211/239‑1 (MQ=255)
                                                                                                                                                           gggCGTTGAACGCGATGCCGTGTTTGGCTTTGTATCGCTGATCTTCTGGCTGCTAATCTTTTGGGTTTCCAATAAATATCT‑CACCTTGGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCGGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCg                                                                                 <  1:414500/238‑1 (MQ=255)
                                                                                                                                                             gCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGCCGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTTTGGGGCTAATCGGCGGCAGATTTTTTTATGGTGAAgcgggctaaacaccggct                                                                               >  2:604220/1‑222 (MQ=255)
                                                                                                                                                             gCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGGTAAGTCGTTATAAAAcccccc                                                                               >  2:665790/1‑236 (MQ=255)
                                                                                                                                                                        gATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTTAt                                                                    >  1:172999/1‑239 (MQ=255)
                                                                                                                                                                        gATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGGGAt                                                                    >  1:179553/1‑239 (MQ=255)
                                                                                                                                                                          tGCCGTTGTTGGCTTTTTATCGCTGGTCTTCTGGCTGTCAATTGTTGGGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACAGCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGt                                                                  <  1:32432/239‑1 (MQ=255)
                                                                                                                                                                          tGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACAACATCAATGCTGGGGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGGGAAGCCGTCATAACACCCGCTATTTCGGTGATGt                                                                  >  1:750354/1‑239 (MQ=255)
                                                                                                                                                                             cGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATAGGCGGAAGCTTTTTCTATGGTGAAGACGTCATACAACACGCTATTTCGGTGATGCCa                                                                >  1:42238/1‑238 (MQ=255)
                                                                                                                                                                               tgtTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAg                                                               >  1:517385/1‑237 (MQ=255)
                                                                                                                                                                                    ggCTTTTTAGCGCGGATCTTCTGGCGTCTAATCTTTGTGGTTCTCATTAAAGATCG‑CACCTTCGGTATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGa                                                        <  1:205985/239‑1 (MQ=255)
                                                                                                                                                                                         tttATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGTTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTc                                                   >  2:77331/1‑239 (MQ=255)
                                                                                                                                                                                         tttATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGATTTTTCTCTGGTGAAGTCGTCATAACACCCGCAATTTCGGTGATGTCAGCCATTGCAgg                                                     >  1:892243/1‑237 (MQ=255)
                                                                                                                                                                                                        ttGGCTGGTAATTTTGGTGGTTTCAATTAAATTTCT‑CTCCTGCGGGATGCGGGCAGATACCGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGGGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGccc                                    <  2:172999/238‑1 (MQ=255)
                                                                                                                                                                                                           gtttctactttttGTGTTTTCCCTTAAATTACT‑CCTCTTCGTAACGCGGTCAGCTAGCGCCGG‑GGA‑TGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATTCGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACTCCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCGc                                 <  2:305783/229‑1 (MQ=255)
                                                                                                                                                                                                           gctgctAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTTTGGTGAAGTCGTCATAACACCCGTCTTTTCGGGGTTTTCGGCCATTTAAggacggggaacgtgcgcccccc                                 >  2:877793/1‑219 (MQ=255)
                                                                                                                                                                                                             tgctAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGACCCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGCCGTCATAACACCCCCTATTTCGGTGATGTCACCACTTGAAGGGTTGGAAAACGGcccccccgcg                               >  2:767613/1‑235 (MQ=255)
                                                                                                                                                                                                             tgctAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAac                                                                                      <  2:510259/184‑1 (MQ=255)
                                                                                                                                                                                                             tgctAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAac                                                                                      >  1:510259/1‑184 (MQ=255)
                                                                                                                                                                                                              gttAATCTTTGTGGTTTCCATTAAATTCCC‑CCCCTGTGGGGTGGGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGGCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCGCAg                               <  2:179553/236‑1 (MQ=255)
                                                                                                                                                                                                               ctAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGCTGTCAGCCATTGAAGGCCCGGAAATCGTCGCCCCGCa                                >  1:140990/1‑236 (MQ=255)
                                                                                                                                                                                                                ttatttttGTGGTTTCCCTTAAAATTCT‑CCCCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCGCAGCTg                            <  2:642126/234‑1 (MQ=255)
                                                                                                                                                                                                                tAATTTTTGTGGGTTCCATTAAATATCT‑CTCCTTCGTGATGCGGGCATGTAACGCTGG‑TGA‑GGGGGGGATCCCTACGTTGATGGCGCTTGCCGGGCGGAATACGTCGGCGCGACCCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCGCAGCTg                            <  2:227018/239‑1 (MQ=255)
                                                                                                                                                                                                                 aagttttGGGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCACCGCAGCTg                            <  1:528461/234‑1 (MQ=255)
                                                                                                                                                                                                                  atttttGTGGTTTCCATTAAATATCT‑CCCCTTCGGGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGAGGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCGCAGCTGGa                          <  2:733558/236‑1 (MQ=255)
                                                                                                                                                                                                                   taaaagaggcagccATTAAACATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCGCAGCTGGa                          <  1:704246/226‑1 (MQ=255)
                                                                                                                                                                                                                     tttGTGGGTTCCATTAAATATCC‑CCCCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCGCAGCTGGATAc                       <  1:79904/239‑1 (MQ=255)
                                                                                                                                                                                                                     tttGGGTTTTCCATTAAAATTCT‑CCCCTTCGTGTGGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGGCGGTGATGGCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCGCAGCTGGATAc                       <  2:431969/239‑1 (MQ=255)
                                                                                                                                                                                                                       tgtgGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCCCAGCTGGATa                        >  1:599138/1‑236 (MQ=255)
                                                                                                                                                                                                                          gttttCCATTAAATTGCT‑GCCCTTCTGGGGGGGGGCACGTAGCGGCGG‑GTG‑GGGGGGTGTTCTGACGTTGATGTCGCTTGCCGGGGGTAATACGTCGGCGCCAACCTCATTAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCGCAGCTGGATACCTGGa                  <  2:542134/237‑1 (MQ=255)
                                                                                                                                                                                                                              tCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGt                                                                                                                                         <  1:525266/116‑1 (MQ=255)
                                                                                                                                                                                                                              tCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGt                                                                                                                                         >  2:525266/1‑116 (MQ=255)
                                                                                                                                                                                                                              tCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCGCAGCTGGATACCTGGATAGt              >  1:431969/1‑239 (MQ=255)
                                                                                                                                                                                                                              tCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGGGAAGCCGTCATAAAACCCGCTATTTCGAGGATGTCAGCCCTTTAAGGCCTGGAAAACGTCGCCCCCCACCGGGATCCCggggaata              >  2:264607/1‑234 (MQ=255)
                                                                                                                                                                                                                                cATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGa                                                        <  1:534547/195‑1 (MQ=255)
                                                                                                                                                                                                                                  ttAAATTTCT‑CCCCTGCGTGGTGGGGGCAGATAACGCCGG‑GGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCGCAGCTGGATACCTGGATAGTTccc          <  2:515921/239‑1 (MQ=255)
                                                                                                                                                                                                                                    aaaTATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCGCAGCTGGATACCTGGATAGTTcccc         >  1:652888/1‑238 (MQ=255)
                                                                                                                                                                                                                                         tct‑cACCTTCGTGATGCGGGCAGAGAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCGCAGCTGGATACCTGGATAGTTCCCCTCTCaa   <  1:813254/239‑1 (MQ=255)
                                                                                                                                                                                                                                          ct‑cCCCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAAc                                                                                                                                                        <  2:867445/89‑1 (MQ=255)
                                                                                                                                                                                                                                          ct‑cACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAAc                                                                                                                                                        >  1:867445/1‑89 (MQ=255)
                                                                                                                                                                                                                                          ct‑cACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCGCAGCTGGATACCTGGATAGTTCCCCTCTCact  >  1:843331/1‑237 (MQ=255)
                                                                                                                                                                                                                                          ct‑cACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAAAACCCGCTATTTCGGTGATGTCAGCCATTGAAGGGCTGGAACTCGTCGCCCCCCCACTGGATACCGGGATacgttgctcttaaac  >  2:704246/1‑225 (MQ=255)
                                                                                                                                                                                                                                          ct‑cACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTAGTCATAACACCCGCTATTTCGGGGATGTCACCCATTGAAGGTCTGGAAATCGCCCCCCCGCAGCGGGAACACTGGATATTTACCCCCTCAAt  >  2:731772/1‑239 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                             
ACATTTCATATTTCAACGAAAGACTAGTCTATGAGCACTGATAATAAGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCT‑CACCTTCGTGATGCGGGCAGATAACGCCGG‑TGA‑GGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCGCAGCTGGATACCTGGATAGTTCCCCTCTCAAT  >  NC_000913/3931285‑3931757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A