Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F9 I0 R1 131 136.1 2723430 98.1% 2671684 229.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,377,071 A→C 17.0% S80S (TCA→TCC)  ycjS → putative NADH‑binding oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,377,0710AC17.0% 214.3 / 6.3 101S80S (TCA→TCC) ycjSputative NADH‑binding oxidoreductase
Reads supporting (aligned to +/- strand):  ref base A (41/40);  new base C (5/14);  total (46/55)
Fisher's exact test for biased strand distribution p-value = 7.41e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 101 total aligned reads displayed.

AAAGTGCAATGACAAGCTCTCCGCTGCGGGTCGCGATAATAGGCGCAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGATTTACGTTACCACCGCCC  >  NC_000913/1376836‑1377306
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                           
aaaGTGCAATGACAAGCTCTCCGCTGCGGGTCGCGATAATAGGCGCAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGGTAGCGTCTGCTCACCt                                                                                                                                                                                                                                          >  2:1045726/1‑239 (MQ=255)
   gTGCAATGACAAGCTCTCCGCTGCGGGTCGCGATAATAGGCGCAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTGTGCCCACCTaa                                                                                                                                                                                                                                        >  2:1263804/1‑238 (MQ=255)
              aGCTCTCCGCTGCGGGTCGCGATAATAGGCGCAGGCCAGTGGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTa                                                                                                                                                                                                                            <  2:102427/239‑1 (MQ=255)
              aGCTCTCCGCTGCGGGTCGCGATAATAGGCGCAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTa                                                                                                                                                                                                                            <  1:479134/239‑1 (MQ=255)
                 tctcCGCTGCGGGTCGCGATAATAGGCGCAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACg                                                                                                                                                                                                                          <  1:693634/238‑1 (MQ=255)
                  ctcCGCTGCGGGTCGCGATAATAGGCGCAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGaa                                                                                                                                                                                                                        <  2:1238004/239‑1 (MQ=255)
                   tcCGCTGCGGGTCGCGATAATAGGCGCAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAAc                                                                                                                                                                                                                       <  1:704209/239‑1 (MQ=255)
                   tcCGCTGCGGGTCGCGATAATAGGCGCAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAAc                                                                                                                                                                                                                       >  2:1212024/1‑239 (MQ=255)
                    ccGGTGCGGGTCGCGATAATAGGCGCAGGCCAGGGGGCGGATTAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACa                                                                                                                                                                                                                      <  2:42986/239‑1 (MQ=255)
                       cTGCGGGTCGCGATAATAGGCGCAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGGAACCTGGTGTGGTTAGCGTCTGCTCCCCTAAACGTTTTCCTTACGCACATa                                                                                                                                                                                                                    >  2:653529/1‑238 (MQ=255)
                          cGGGTCGCGATAATAGGCGCAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGGAAACTGATGGGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATAcc                                                                                                                                                                                                                  >  2:211284/1‑237 (MQ=255)
                             gTCGCGATAATAGGCGCAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGCGAAACCTGCTGTGGTTAGCGTCTGCTCCCCTAACCGTTTTCATTACGCACATACCCTGAt                                                                                                                                                                                                             >  1:156485/1‑239 (MQ=255)
                              tCGCGATAATAGGCGCAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGAt                                                                                                                                                                                                             <  2:692684/238‑1 (MQ=255)
                              tCGCGATAATAGGCGCAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGAt                                                                                                                                                                                                             <  1:707008/238‑1 (MQ=255)
                               cgcgATAATAGGCGCAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGCAGGGGGTAGGGTTTGCCTCCCTAACCGCTTTCATTACGAACATACCCTGAAgg                                                                                                                                                                                                           >  1:751185/1‑239 (MQ=255)
                                 cgATAATAGGCGCAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGGTGGGGTTAGCGTCTGCTCACCTAACCGGTTTCCTTACGAACATAACCTGATGGc                                                                                                                                                                                                          >  2:1089761/1‑238 (MQ=255)
                                          gcgcAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGc                                                                                                                                                                                                 <  2:695663/238‑1 (MQ=255)
                                           cgcAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCg                                                                                                                                                                                                <  2:748025/238‑1 (MQ=255)
                                            gcAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTa                                                                                                                                                                                                                            >  2:444902/1‑209 (MQ=255)
                                            gcAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTa                                                                                                                                                                                                                            <  1:444902/209‑1 (MQ=255)
                                            gcAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCggg                                                                                                                                                                                              <  1:535219/239‑1 (MQ=255)
                                            gcAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCggg                                                                                                                                                                                              <  1:835102/239‑1 (MQ=255)
                                            gcAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCggg                                                                                                                                                                                              <  2:28402/239‑1 (MQ=255)
                                            gcAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCggg                                                                                                                                                                                              <  2:325764/239‑1 (MQ=255)
                                            gcAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCggg                                                                                                                                                                                              <  2:632583/239‑1 (MQ=255)
                                             cAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCggg                                                                                                                                                                                              <  2:644787/238‑1 (MQ=255)
                                             cAGGCCAGGGGGCAGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGGTCTGGAACTGGTGGCTGTCTGTGACCGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCggg                                                                                                                                                                                              <  2:860668/238‑1 (MQ=255)
                                              aGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTCGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCgg                                                                                                                                                                                               >  1:796986/1‑236 (MQ=255)
                                                 ccAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCt                                                                                                                                                                                            <  1:611135/236‑1 (MQ=255)
                                                     gTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGGTTTCATTACGAACATACCCTGATGGCCCTGGAAACGGGCTGCCatgt                                                                                                                                                                                     >  1:456828/1‑239 (MQ=255)
                                                         cGGATAAGGTTCATGCTTCGTACCACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCATGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCatgtgat                                                                                                                                                                                  <  1:1292414/238‑1 (MQ=255)
                                                                        cTTCGTACTACTGCCCCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCCCCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAAccgccc                                                                                                                                                                  <  1:1041010/239‑1 (MQ=255)
                                                                         ttCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAACCCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAAccgccc                                                                                                                                                                  <  1:121520/238‑1 (MQ=255)
                                                                           cGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGGTTTCCTTACGAACATACCCTGATGGCACTGGAAGCTGGCTGCCATGTGGTGTGCGAAAAAccgcccgc                                                                                                                                                                >  1:231638/1‑238 (MQ=255)
                                                                           cGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGT‑GGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCCTGTGGTGTGCGAAAAACCGCCCGCCa                                                                                                                                                              >  1:599686/1‑239 (MQ=255)
                                                                                  ctGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGGTTTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGGACATAACCTTATTGCACTGGGAGGGGGCCTCCATTTTATGGGCGAAAAACCGCCCGCCacgcac                                                                                                                                                         >  2:1313002/1‑233 (MQ=255)
                                                                                     cACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATTTGCGAAAAACCGCCCGCCATGACGCCAg                                                                                                                                                     >  1:1287287/1‑239 (MQ=255)
                                                                                     cACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAg                                                                                                                                                     >  1:400533/1‑239 (MQ=255)
                                                                                       cccGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGGTGTGGTTAGCGTCTGCTCCCCTAACCGTTTTCCTTACGAACATCACCCGCTGGCCCTGGAAGCGGGCCTCCATGTGTTGTGCGCAAAACCCCCCGCCATGGCGccggc                                                                                                                                                    >  2:113887/1‑235 (MQ=255)
                                                                                       cccGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGGGTCCTCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAACGGGCCGCCATGTGATGTGCGAAAAAACCACCGCCATGACGCCAGa                                                                                                                                                    >  2:529353/1‑238 (MQ=255)
                                                                                          gCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAGAAAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACa                                                                                                                                                 >  1:1249323/1‑239 (MQ=255)
                                                                                           cagcGATCTGGAAGTGGTGGCTGTCTGTGACAGCCGCCTTGCCCAGGCGCAGGCGCG‑GGCAG‑AAAAATACGGGAATGCAGCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAgg                                                                                                                                               <  1:134767/236‑1 (MQ=255)
                                                                                                   tGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAAGGCATCCGTGTGGGACGA‑TCCGCGGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTACCCTTTTTCATTACGAACATCCCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGaa                                                                                                                                       <  1:1331122/239‑1 (MQ=255)
                                                                                                    ggAAGTGGTGGCTGTGTGGAACTGCGGCTTGTCCAAGGCGGGGGAGCT‑GGCAA‑AAAAATACGGGAATGCATGCGGGGGGGACGT‑TCCGCGGGCGATGCTGCGGGCGGTGAACCCTGATGTTGTTGGCGTCTGCCCCCCTACCCGTTTTCATTACAAACATCCCCTGGTGGCACTGGAAGGGGGCAGCGATGTGTTGTGCAAAAACCCGCCCGCCATGACGCCAGAACAGGCGCGGGaa                                                                                                                                       <  2:1252897/238‑1 (MQ=255)
                                                                                                           gtggCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGGACATACCCTGATGGCCCTGGAAGCCGGCTGCCATGTGATGTGCGGAAAAACGCCCGCCATGACGCCAGAACAGGCGCGGGGAATGTGCGa                                                                                                                               >  1:581596/1‑239 (MQ=255)
                                                                                                           gtggCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTTATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGa                                                                                                                               >  1:615533/1‑239 (MQ=255)
                                                                                                           gtggCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCCAACCGTTTTCATTACGAACATACCCTGATGGCAATGGAAGCGGGCTGCCATGTGATGTGAGGAAAACCGCCCGCCATGACGCCCGGACAGGCGCGGGAAATGTGCGa                                                                                                                               >  2:270243/1‑239 (MQ=255)
                                                                                                                tgtctgtGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGGAATGTGCGATAcc                                                                                                                           >  1:195486/1‑238 (MQ=255)
                                                                                                                  tctgtGACAGCCGCCTTCCCCGGGCGAGGGCGCG‑GGCAA‑AAAAATAGGGGAATGCATCGGTGTGGGACGA‑CCCGCAGGCCATGCTGCTGGCGGTGAACCCTGTTGTGTTTAGCGTCTGCTCCCCTAACCTTTTTCATTACGAACATCCCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCAAAAACCCGCCCGCCATGACGCCAGAACAGGCGCGGGaa                                                                                                                                       <  2:388479/224‑1 (MQ=255)
                                                                                                                     gtgACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGGAATGTGCGATACcgcgcg                                                                                                                      >  1:706806/1‑238 (MQ=255)
                                                                                                                     gtgACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCgcgcgc                                                                                                                     >  1:882016/1‑239 (MQ=255)
                                                                                                                            ccgccTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATa                                                                                                                             >  1:388479/1‑224 (MQ=255)
                                                                                                                            ccgccTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTgg                                                                                                              >  1:690682/1‑239 (MQ=255)
                                                                                                                            ccgccTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGGGAAACCTGATGTGGGTAGCCTTTGCTCCCCTAACCGTTTTCATTACGGACATACCCTGCTGGCACCGGAAGGGGGCTGCCATGTGGTTTGCGAAAAACCGCCCCCCCTGGCCCCAGACAAGGCGCGGGGCAAGGGCGACAACCAGCGCAAACAgg                                                                                                              >  2:722969/1‑239 (MQ=255)
                                                                                                                               ccTTCCCCGGGGGCGGGGGCG‑GGCAG‑AAAAATGCGGAAATGCACCCGTGGGGGACGA‑TCCGCGGGCCATGCTGCGGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCCCCTAACCGTTTTCATTACGAACATCCCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCa                                                                                                           <  2:494442/239‑1 (MQ=255)
                                                                                                                                cTTTCCCGGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCa                                                                                                           <  1:963161/238‑1 (MQ=255)
                                                                                                                                    cccAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGTATGCATCCGTGTGGGACGT‑TCCGCAGGCCATGCTGCTGGCGGCGAAAACTGATGGGGATAACCGCTGCCCACCTTACCGCTTTCATTATGAACATACCCTGTTTGCTCTGAAAGCGGGCGGCCATTGGCTTTGCGACAAACCGCCCCTCATGCCGCCATAACAGGCGGGGGAACTGTGCGCAACCGCGCGCAACATGGGCAAgggt                                                                                                      >  2:1046070/1‑237 (MQ=255)
                                                                                                                                    cccAGGCGCAGG‑GCTGGGAAG‑AAAAATA‑GGGAAATCACCCCGGGGGGGCGATTCCGCAGCCCATGCTGCTGGCGGGAAACCCGGATGTGGTAAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATCCCCTGATGGCACTGGAGGCGGGCTGCAATGGGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTg                                                                                                      <  2:1287287/239‑1 (MQ=255)
                                                                                                                                     ccAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGGGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGc                                                                                                     <  1:488389/239‑1 (MQ=255)
                                                                                                                                        gtgccgtgcgcT‑GGCAG‑AAAAAACCGGAAAGACGCCTGGGTGGGACGA‑TCCCCGGCCCATGCGGGTGGCGGTAAACCCTGGTGTTGTAGGCATCGGCTCCCCACACCGTTTTCATTCCAAACAGACCGGGAGGGGTGTGGAAGCGGGCGGCATAGTGATGGGCGAAAAGCCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTg                                                                                                   <  2:751185/231‑1 (MQ=255)
                                                                                                                                         gcgcaggcgcT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCCCGCGCAAAACGGGCCAGGTGCTgg                                                                                                  >  2:245920/1‑238 (MQ=255)
                                                                                                                                         gcgcaggcgcT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGGGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTTGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAAAGTGCGATACCGCGCGCAAACTGGGCAAGGCGCTgg                                                                                                  >  1:1236519/1‑238 (MQ=255)
                                                                                                                                          cgcaggcgcT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCt                                                                                                                                                                                            <  2:714817/147‑1 (MQ=255)
                                                                                                                                          cgcaggcgcT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCt                                                                                                                                                                                            >  1:714817/1‑147 (MQ=255)
                                                                                                                                                                     gattGCATCCGTGTGGAGCGT‑TCCGCTGGCCATGCTGCTGGCGGTGAAACGTGATTTGGTTAGCGTCTGCTCCCTTACCCTTTTTCATTACGAACATCCCCGGATGGCACTGGAGGCGGGTTGCCATGTGATGGGAGAAAACCCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTgcg                                                                        <  2:1058165/235‑1 (MQ=255)
                                                                                                                                                                      aaTGCACCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCGGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCCCCTAACCGTTTTCATTACGAACATCCCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCG‑AAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCt                                                                      <  1:1089761/238‑1 (MQ=255)
                                                                                                                                                                         gCATCCGTGGGGGACGA‑CCCGCAGGCCATGCTGCGGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGAGGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAACCCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGa                                                                   <  1:904464/239‑1 (MQ=255)
                                                                                                                                                                          cATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGaa                                                                                                                                       <  2:376270/170‑1 (MQ=255)
                                                                                                                                                                          cATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGaa                                                                                                                                       >  1:376270/1‑170 (MQ=255)
                                                                                                                                                                               gtgtGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGGGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCa                                                             >  1:684133/1‑239 (MQ=255)
                                                                                                                                                                               gtgtGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGGGGCTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATAACCTGGTGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCCGAACCAGAGTGGGAAATGTGCGGTACCGCGGGAACACTGGGCAAGGGGCCGGCCCTCGACTTATCCCCTCCGTTTGCGCTCGGTACGCa                                                             >  2:858000/1‑239 (MQ=255)
                                                                                                                                                                                tgtgGGACGA‑TCCGCAGGCCATGCTGCTGGCGGGGAAACCTGGTGTGGGTTGCGTCTGCTCACCCAACCGTTTTCATTACGCACATACCCTGATGGCACTGGAAGCGGGCCACCAAGTGCGCTGCGAAAAACCGCCCGCCATGAGGCCCGAACAGGCGCGGGAAATGTGCGATACCGCCAGCACACTGGGCGAGGGGGGGGCCTACGACTTTCACCAACGtttttgggacgctccgca                                                             >  2:456834/1‑224 (MQ=255)
                                                                                                                                                                                   gggACGT‑TCCGCGGGCATTCCTGCTGGCGGTGAAACTTGATGTGTTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATCCCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACa                                                          <  1:456834/238‑1 (MQ=255)
                                                                                                                                                                                   gggACGC‑CCCGCGGCCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCCCCTAACCGTTTTCATTACGAACATCCCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAACCCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACa                                                          <  1:1045726/238‑1 (MQ=255)
                                                                                                                                                                                   gggACGA‑CCCGCGGGCCATGCGGCGGGCGGTGAAACTTGGTGTGTTTGGCGTCTGCTCCCCTACCCTTTTTCATTACGAACATCCCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAACCCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACa                                                          <  2:615533/238‑1 (MQ=255)
                                                                                                                                                                                    ggACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGTTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAACCCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAg                                                         <  1:1212024/238‑1 (MQ=255)
                                                                                                                                                                                      aCGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTACCCTTTTTCATTACGAACATCCCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAACCCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCa                                                                                                           <  1:982935/186‑1 (MQ=255)
                                                                                                                                                                                             cGCATGCCATGCTGCGTGCGGTGAACCCTGATGTGTTTAGCTTCTGCTCACTTAACCGTTTCCATTCCGAACATCCCCGGATGGCAGGGAAAGGGGGCAGCAATGTGATGGGCGAAAACCCCCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGaa                                                <  2:1236519/239‑1 (MQ=255)
                                                                                                                                                                                               agggCCATGCTGCGGGCGGTGAAGCCTGATGTGGTTGGCGTCTGCCCGCCTAGCCGTTTTCATTACAAACAGCCCCTGATGGCACGGGAAGGGGGCTGCCATGTGATGGGAAAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAAc                                               <  2:796986/236‑1 (MQ=255)
                                                                                                                                                                                                       gctgctGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGGGACCa                                      >  1:582005/1‑239 (MQ=255)
                                                                                                                                                                                                                    aacccggttggggTTGGGGTCGGCTCCCTTAACTGTTTTCAGTCCAAACAACCCCTGAGGGCACTGGAGGCGGGGTGCCAGGTGATGTGCAAAAACCCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTggg                         <  2:1081174/228‑1 (MQ=255)
                                                                                                                                                                                                                    aacccggATGTGGTTAGCGTCTGCCCACCTAACCGTTTTCATTACGAACATACCCTGAGGGCACTGGAAGCGGGCTGCAAGGTGATGTGCAAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTggg                         <  1:551001/233‑1 (MQ=255)
                                                                                                                                                                                                                    aaaCCTGATGTGGTTAGGGTCTGCTAACCTAACCGTTTTCATTCCGAACATCCCCTGAGGGCACTGGAGGCGGGCTGCCATGTGATGGGCGAAAACCCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTggg                         <  1:516389/239‑1 (MQ=255)
                                                                                                                                                                                                                     acccTGATTGGGTTACCGTCTGCTCCCCTACCCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATTGGATGTGCAAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGga                        <  1:176780/237‑1 (MQ=255)
                                                                                                                                                                                                                     aaCCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATCCCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGga                        <  1:394009/239‑1 (MQ=255)
                                                                                                                                                                                                                           aTGTCGTTAGCGCCTGCTCACCTAACCGTTTTCATGACAAACATACCCTGATGGCACGGGAAGCGGGCGGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGAtt                  <  1:806271/239‑1 (MQ=255)
                                                                                                                                                                                                                            tgtgGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGAttt                 >  1:507005/1‑239 (MQ=255)
                                                                                                                                                                                                                            tgggtttgtcGTCTGCTCCCCTAACCGTTTTCTTGACGAACATACCCGGATGGCACGGGAAGGGGGCTGCCAGGTGATGGGCAAAAACCCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGAtt                  <  2:400533/229‑1 (MQ=255)
                                                                                                                                                                                                                            ggtgGTTAGCGTCTGCCCCCCTAACGTTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAACCCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGAtt                  <  1:1009981/237‑1 (MQ=255)
                                                                                                                                                                                                                            gggggTTGGCGTCTGCTCCCCTACCCGTTTTCATTCCGAACTACCCCTGAGGCCACGGGAGGGGGGCGGCCAGGTGATGTGCAAAAACCCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGAtt                  <  2:195486/235‑1 (MQ=255)
                                                                                                                                                                                                                             gtgtTTAGCGTCTGCTCACCTAACCGTTTGCATTACGAACATACCCTGAGGGAACTGGAAGGGGGCTGCCATGTGATTCGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGATTTa                <  1:719282/239‑1 (MQ=255)
                                                                                                                                                                                                                                ttgaGCGTCTGCCCACCTACCCGTTTTCATTACGAAAATCCCCGGAGGGCACGGGAAGCGGGCTGCCATGTGATGTGCGAAAACCCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGATTTACg              <  2:582005/235‑1 (MQ=255)
                                                                                                                                                                                                                                gTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGATCAGGTGACCAACGGCGTTTTGGGAGAGATTTACGt             >  1:481202/1‑239 (MQ=255)
                                                                                                                                                                                                                                 ttAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCC‑ACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGATTTACGtt            >  1:194959/1‑238 (MQ=255)
                                                                                                                                                                                                                                     cGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGATTTACGTTacc         >  1:1201606/1‑238 (MQ=255)
                                                                                                                                                                                                                                     cGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGATTTACGTTacc         >  1:900660/1‑238 (MQ=255)
                                                                                                                                                                                                                                         tGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGATTTACGTTACCAccg     >  1:532601/1‑238 (MQ=255)
                                                                                                                                                                                                                                          gCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGATTTACGTTACCAccgc    >  2:362585/1‑238 (MQ=255)
                                                                                                                                                                                                                                           cTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGATTTACGTTACCAccgccc  >  1:1169602/1‑239 (MQ=255)
                                                                                                                                                                                                                                            ccACCTAACCGTTTTCATTACGAACATACCCGGATGGCACTGGAAGCGGGCGGCAATGGGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGATTTACGTTACCAccgccc  <  1:211284/237‑1 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                           
AAAGTGCAATGACAAGCTCTCCGCTGCGGGTCGCGATAATAGGCGCAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCT‑GGCAG‑AAAAATACGGGAATGCATCCGTGTGGGACGA‑TCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGATTTACGTTACCACCGCCC  >  NC_000913/1376836‑1377306

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A