Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F9 I0 R1 131 136.1 2723430 98.1% 2671684 229.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,783,214 A→C 13.5% G149G (GGT→GGG)  gpsA ← glycerol‑3‑phosphate dehydrogenase (NAD+)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,783,2140AC13.5% 389.4 / 4.5 136G149G (GGT→GGG) gpsAglycerol‑3‑phosphate dehydrogenase (NAD+)
Reads supporting (aligned to +/- strand):  ref base A (83/28);  new base C (2/22);  total (86/50)
Fisher's exact test for biased strand distribution p-value = 1.33e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 136 total aligned reads displayed.

CGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCAAAGACATGGCTGGGTACGACGACGAGAATATTACGGCTGGCTGCCAGCGCA  >  NC_000913/3782978‑3783448
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                            
               agccCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGCCTGATCGGTC‑GCGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCtt                                                                                                                                                                                                                            >  2:459189/1‑238 (MQ=255)
                 cccACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTc                                                                                                                                                                                                                          >  2:773467/1‑238 (MQ=255)
                   cACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCa                                                                                                                                                                                                                       <  1:747975/239‑1 (MQ=255)
                         tGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGt                                                                                                                                                                                                                  <  1:770256/238‑1 (MQ=255)
                         tGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGt                                                                                                                                                                                                                  <  1:941791/238‑1 (MQ=255)
                           aTCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCCCCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTgg                                                                                                                                                                                                               >  2:1208633/1‑239 (MQ=255)
                           aTCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGCAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCCAACGTTgg                                                                                                                                                                                                               >  2:126138/1‑239 (MQ=255)
                           aTCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTgg                                                                                                                                                                                                               >  1:597521/1‑239 (MQ=255)
                           aTCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTgg                                                                                                                                                                                                               >  1:83937/1‑239 (MQ=255)
                           aTCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTgg                                                                                                                                                                                                               >  2:82933/1‑239 (MQ=255)
                           aTCAGCGCCGTAAGCGCAGTCGCACCAAAACCGATACCGTCGGACATTCACGCACAAATGGCAATAA‑CGTTTTTCACCTCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAAGCAGGAAACTTTTGACGCAGTGCCGCAGATGCTGGCGCTCACCGCCAAAGGTCTGATCCGTC‑TATGCCAGCGAAATAGCTGGAGGTCAC‑CCTG‑CCGCCCGACCTTTctccgtcgttgt                                                                                                                                                                                                               >  2:1061956/1‑228 (MQ=255)
                                cgcCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAG‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCag                                                                                                                                                                                                          >  2:943422/1‑239 (MQ=255)
                                cgcCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCag                                                                                                                                                                                                          >  1:254119/1‑239 (MQ=255)
                                cgcCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGCCCag                                                                                                                                                                                                          >  2:892574/1‑239 (MQ=255)
                                 gcCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCag                                                                                                                                                                                                          <  2:310680/238‑1 (MQ=255)
                                  ccGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGCAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGCACTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAC‑CCTG‑CCGCCCGTTCTTTCTCAACCGTTGGGCCagac                                                                                                                                                                                                        >  2:477376/1‑238 (MQ=255)
                                     tACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATa                                                                                                                                                                                                     >  2:73781/1‑239 (MQ=255)
                                     tACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATa                                                                                                                                                                                                     >  1:544578/1‑239 (MQ=255)
                                     tACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAG‑TGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGCAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATa                                                                                                                                                                                                     >  1:908029/1‑238 (MQ=255)
                                          gcATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCg                                                                                                                                                                                                 >  1:1091596/1‑238 (MQ=255)
                                             ttCGCACCAAAACCGATCCCGTCGGACATCCCCGCCCCAATGGCAATAA‑CTTTTTCCCCCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTTTTTCGCAAACGTTGGGCCAGAGATAACCGCCAg                                                                                                                                                                                             <  1:820146/239‑1 (MQ=255)
                                                       accccatcccGTCGGAACCCCCCGCACCAAGGCCAATAA‑CGTTTTTCCCCGGGCCGCCAAGCGGCCCGCCAATGAAATCCGGATTGCGGAAAACGGGGAAACTTTTGCCGCAGTGCAGCAGCTGCGGGAGATCACCGGCAAAGGTCGGATCGGTG‑GAGGCCAGCGAAATGGCTGTCGGTAAC‑CCTG‑CCGCCAGTTCTTCCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGa                                                                                                                                                                                   <  2:1091596/231‑1 (MQ=255)
                                                        cccgatcccgccgacaacccccGCACCAATGCCAAAAC‑CTTTTTCCCCCGCCCCGCCAAGCTGCACGCCAATGAAACCCGGATTGCTTAAAACGCGGAACTTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCACCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTGGGTAAA‑CCTG‑CCGCCAGTTCTTCCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGAt                                                                                                                                                                                  <  2:220738/221‑1 (MQ=255)
                                                        cccGATACCGTCGGACACCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCAAAGCTGCACGCCAATGAAATCCGGATGGCTGAAAACGCGGAAACTTTTGCCGCAGTGCGGCAGCGGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGAt                                                                                                                                                                                  <  1:385203/238‑1 (MQ=255)
                                                            aTACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCg                                                                                                                                                                                >  1:1023339/1‑237 (MQ=255)
                                                            aTACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCg                                                                                                                                                                                >  1:1164907/1‑237 (MQ=255)
                                                              aCCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATAGCCTa                                                                                                                                                                            >  1:428440/1‑239 (MQ=255)
                                                                       ccgccccccACAAGTGGAAAAAA‑CGTTTTCACCCGGCCCGCAGTGCTGAACCGCAATGAAAGCCGGATGGCTGTAAACGGGGAAACTTTCGCCGGAGGGGAGCAGGGGGGGGAGATCAGGGGAAAGGGTTGGATCGGTC‑GGGCCCGGAGAAATAGCTGTGGGTAAA‑CCTC‑CCGCCAGTTCTTTCGCAAACGTGGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCa                                                                                                                                                                    <  2:1013334/235‑1 (MQ=255)
                                                                       cATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCAc                                                                                                                                                                   >  1:356174/1‑239 (MQ=255)
                                                                       cATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCAAATGAAATCCGGATGGCTGTAAACGCGGAACCTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAC‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCa                                                                                                                                                                    <  1:497994/238‑1 (MQ=255)
                                                                       cATCCCCCCACCAATGGCAATAA‑CGTTTTTCCCCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAC‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCAc                                                                                                                                                                   <  1:1125824/239‑1 (MQ=255)
                                                                       aacccccTCACAAAGGGCAATAA‑CGTTTTCCCCCGCGCCGCCAACGTGCCCGCCAATGAAACCCGGATTGCTGTAACCGGGGAAGCTTTTGCCGCAGTGAAGCAGCGGCTGGAGATCATGGGCAAAGGTCTGATCGGCC‑GAGGCCAGCAAAATGGCTG‑CGGTAAACCCCG‑CCGCCAGTTTTTTCGCAACCGTTGGCCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCAc                                                                                                                                                                   <  2:1044349/236‑1 (MQ=255)
                                                                          ccccGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGGAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCAcgc                                                                                                                                                                 >  1:698760/1‑238 (MQ=255)
                                                                          ccccGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCAcgc                                                                                                                                                                 >  2:418009/1‑238 (MQ=255)
                                                                            cggCACCAATGGCAAAAT‑CTTTTGTCCCCTGGCCGCCAAGGTACCGGCAGATGAACGCCGGATTTCTGTAAACGGGGAAACTTGCGCCCAAGTGCGGCGCCGGTTGGAGGTCAGCGACAAAGGTGTGATCGGTA‑GGGGCAAGGGAAAGAGCGGTGGGTACC‑CCGG‑CCGCAATTTTTTCCGCAAACGTTGGGCGGGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGcc                                                                                                                                                              <  2:854801/237‑1 (MQ=255)
                                                                             cgcccaaagggCAATGA‑CGTTTTCCCCCGCGCCGCAAAGCTCCCCGCCATTGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCGGCGGGAGATCATCGGCAAAGGTCTGATGGGTC‑GAGCCCAGCGAAATAGCTGTCGTAAAC‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCa                                                                                                                                                             <  2:329242/230‑1 (MQ=255)
                                                                             caccccAAAGGCAACAACCTTTTTTCCCCGCCCCGCAAAGCTGCACGCAAAGGAAACCCGTATTCCTGAAAAGCCGGAACTTTTTGCCGAAGTGCGGCAGCTGCGGGGGACCAGCGGAAAGGTTCGGAT‑GGTCGGAGGCCAGCAAATTTGCTGTCGGTAAC‑CCGG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGAGAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGcc                                                                                                                                                              <  2:1119292/235‑1 (MQ=255)
                                                                             cGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGcc                                                                                                                                                              >  1:596010/1‑238 (MQ=255)
                                                                                aCCAATGGCAATAG‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAACCTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACg                                                                                                                                                           <  1:802643/238‑1 (MQ=255)
                                                                                    aTGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGt                                                                                                                                                          >  1:450496/1‑235 (MQ=255)
                                                                                    aTGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGt                                                                                                                                                          >  1:329242/1‑235 (MQ=255)
                                                                                    aTGGCAATAA‑CGTTTTTCACCGCGCCGCAAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGCGATCATCGGCAAAGGTCTGCTCGGTC‑GAGGCCCGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCAAGTTCTTTCGCAAACGTTGGGCGCGTGAGAACCGCCAGCGGCATTTGATCGCGTAAGGCCTCACGCGCCTCGTCATg                                                                                                                                                      >  2:905030/1‑239 (MQ=255)
                                                                                     tGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGt                                                                                                                                                     >  1:1098099/1‑239 (MQ=255)
                                                                                          aTAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAg                                                                                                                                                >  2:483719/1‑239 (MQ=255)
                                                                                          aTAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAg                                                                                                                                                >  1:825863/1‑239 (MQ=255)
                                                                                          aTAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAg                                                                                                                                                >  1:715845/1‑239 (MQ=255)
                                                                                          aTAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAg                                                                                                                                                >  1:621325/1‑239 (MQ=255)
                                                                                               cGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGACCTCACGCGCCACGTCCTGTAACAGACg                                                                                                                                             >  2:1321645/1‑238 (MQ=255)
                                                                                                    ttCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGCATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGCCCGGt                                                                                                                                       >  2:863414/1‑239 (MQ=255)
                                                                                                          gcgcCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTcc                                                                                                                                   >  1:1045374/1‑237 (MQ=255)
                                                                                                               gccAAGCGGCACGCCAATGAAATCCGGATGGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCACCGGAAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAC‑CCGG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCa                                                                                                                            <  1:1314811/239‑1 (MQ=255)
                                                                                                                        cccgacAATGAATGCGGGATTGCTGTAACCGCGGAAACTTGTCCCGCAGTGCAGCGGCTGTTGGAGTTCGGCGGAAAGGGTCTTATGGGTC‑GAGCCAAGCGAAACAGCTGTCGGTAAC‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTgg                                                                                                                   <  2:167378/234‑1 (MQ=255)
                                                                                                                        cACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGCTCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTgg                                                                                                                   >  1:1253224/1‑239 (MQ=255)
                                                                                                                         aCGCCAATGAAATCCGGATGGCTGAAAACGCGGAAACTTTTGCCGCAGTGCGGCAGCTGATGGAGATCATCGGCAAAGGTCTGAGCGTTC‑GGGGCCAGCGAAATGGCTGTCGGTAAC‑CCTT‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTgg                                                                                                                   <  1:332233/238‑1 (MQ=255)
                                                                                                                          cGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGt                                                                                                                  >  2:1271124/1‑238 (MQ=255)
                                                                                                                          cGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGCAACAGACGTCCGGTTTCCGCTTCCAGCCCTTCGGTc                                                                                                                 >  2:46402/1‑239 (MQ=255)
                                                                                                                             cAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGc                                                                                                               >  1:483865/1‑238 (MQ=255)
                                                                                                                               aTGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGccc                                                                                                             >  2:928858/1‑238 (MQ=255)
                                                                                                                                tGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCcac                                                                                                           >  2:249141/1‑239 (MQ=255)
                                                                                                                                tGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCcac                                                                                                           >  1:1099772/1‑239 (MQ=255)
                                                                                                                                       cGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGAc                                                                                                    >  2:493219/1‑239 (MQ=255)
                                                                                                                                       cGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGAc                                                                                                    >  1:839395/1‑239 (MQ=255)
                                                                                                                                         gATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGAcgc                                                                                                  >  2:292947/1‑239 (MQ=255)
                                                                                                                                              cggTAACCGCGAAAACTTTGGCCGGAGGCGGGCGGTGGCGGGAAACCACCGGCAAGGGTCTGATCGGTC‑GGGGCCAGCGAAATAGCTGCCGGTAAC‑CCGG‑CCGCCAGTTCTTCCGAAACCGTTGGGCAAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCAt                                                                                              <  2:227903/236‑1 (MQ=255)
                                                                                                                                               tGTAAACGCGGAAACTTTGGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAGGGTCGGATCGGTC‑GAGGCCAGCGAAATGGCTGCCGGTAAC‑CCTG‑CCGCCAGTTCTTTCGCAAACGTGGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCa                                                                                            <  1:656651/239‑1 (MQ=255)
                                                                                                                                                 tAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCACAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATCACCGCCAGCGGAATTTGATCGCCTCAGGCCTCACGCGCCCCGTCCTGTAACCGACGTCCGGTTTCCGCTTTCATCCCTTTTCTCGCCACCACCAGCCGCGCATccg                                                                                           >  2:1321567/1‑236 (MQ=255)
                                                                                                                                                  aaaCGGGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAC‑CCGG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGa                                                                                         <  1:1198662/239‑1 (MQ=255)
                                                                                                                                                        ggAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCAt                                                                                    <  1:773467/238‑1 (MQ=255)
                                                                                                                                                        ggAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATc                                                                                   >  1:707251/1‑239 (MQ=255)
                                                                                                                                                        ggAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGCTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATc                                                                                   >  1:944059/1‑239 (MQ=255)
                                                                                                                                                          aacctttgcccccattGCAGCAGCGGCGGGAGATCACCGGAAAAGTTCTGTTCGGCC‑GAGGCCGGCGAAATGCCTGTCGGTAAC‑CCGG‑CCGCCATTTCTTTCGCAACCGTTGGGCCAGAGATACCCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAg                                                                                 <  2:825863/224‑1 (MQ=255)
                                                                                                                                                          aaaCTTTGGCCGAAGTGCAGCAGCGGCGGGAGATCATCGGCAAGGGTCTGATGGGTC‑GAGGCCAGCAAAATAGCTGTGGGAAAA‑CCTG‑CCGCCAGTTCTTCCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAg                                                                                 <  2:1113217/239‑1 (MQ=255)
                                                                                                                                                                ttGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCCCCCACCCCAGGCGCGCATCAGGACGCCTCAGGGGttt                                                                           >  2:157405/1‑239 (MQ=255)
                                                                                                                                                                          gcagcaGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GGGGCCAGCAAAATAGCTGTGGGTAAA‑CCTG‑CCGCCGGTTCTTTCGCAAACGTGGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGgcgc                                                                 <  1:154382/239‑1 (MQ=255)
                                                                                                                                                                                 ctgctgGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACt                                                           >  1:731351/1‑238 (MQ=255)
                                                                                                                                                                                 ctgctgGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACt                                                           <  1:483719/238‑1 (MQ=255)
                                                                                                                                                                                 ctgcggGAGCTCACCGGCAAAGGCCTGAGCGGTC‑GAGGCCAGCGAAATAGCTGGCGGTAAC‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACt                                                           <  2:597521/238‑1 (MQ=255)
                                                                                                                                                                                  tgctgGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCAc                                                            <  1:73781/236‑1 (MQ=255)
                                                                                                                                                                                   gctgGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTc                                                         >  1:672052/1‑238 (MQ=255)
                                                                                                                                                                                     tgGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCAcc                                                      >  1:549676/1‑239 (MQ=255)
                                                                                                                                                                                        agaTCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCaaa                                                   >  2:825264/1‑239 (MQ=255)
                                                                                                                                                                                           tcatcGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCAAAGAc                                                >  1:883156/1‑239 (MQ=255)
                                                                                                                                                                                                    aaGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCa                                                     <  1:1009443/225‑1 (MQ=255)
                                                                                                                                                                                                    aaGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCa                                                     >  2:1009443/1‑225 (MQ=255)
                                                                                                                                                                                                       gTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCAAAGACATGGCTGGGTac                                    >  1:924313/1‑239 (MQ=255)
                                                                                                                                                                                                             tggttC‑GAGGCCAGAAAAATGGTGGTGGTTAAA‑CCGC‑CCGCCAGTTTTTTCGCAACCGTCGGGCCAGAGATATCCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCAAAGACATGGCTGGGTacgacgac                              <  2:892415/235‑1 (MQ=255)
                                                                                                                                                                                                             tgggcc‑GAGGCCAGCGAAATGGCGGGCGGAAAA‑CCCG‑CGGCCAGTTCTTCCCCAAAGGTGGGGCCGGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCAAAGACATGGCTGGGTacgacgac                              <  2:621325/234‑1 (MQ=255)
                                                                                                                                                                                                                ggc‑GAGGCAAGCAAAATAGCGGT‑GGTGAA‑CCCGTCCGCCAGTTCTTTCGCAAACGTTGGGCCAGAAATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCAAAGACATGGCTGGGTAcgacgacga                            <  1:614754/236‑1 (MQ=255)
                                                                                                                                                                                                                 tC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCAAAGACATGGCTGGGTACGACGACgaga                          >  2:680225/1‑239 (MQ=255)
                                                                                                                                                                                                                 tC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCAAAGACATGGCTGGGTACGACGACgaga                          >  2:858631/1‑239 (MQ=255)
                                                                                                                                                                                                                       gCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCCGCACTTCACAAAAGACATGGCTGGGTACGACGACGAGAATAtt                     >  2:713343/1‑239 (MQ=255)
                                                                                                                                                                                                                            cGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCAAAGACATGGCTGGGTACGCCGACGAGAATATTACg                  >  1:1330558/1‑237 (MQ=255)
                                                                                                                                                                                                                            cGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCAAAGACATGGCTGGGTACGACGACGAGAATATTACggc                >  2:693676/1‑239 (MQ=255)
                                                                                                                                                                                                                            cGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCAAAGACATGGCTGGGTACGACGACGAGAATATTACg                  >  2:183840/1‑237 (MQ=255)
                                                                                                                                                                                                                            cGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCAAAGACATGGCTGGGTACGACGACGAGAATATTACg                  >  1:986689/1‑237 (MQ=255)
                                                                                                                                                                                                                              aaaaggcggTCGGTAAC‑CCGC‑CCGCCAGTTCTTTCGCAAAGGTGGGGCCAGAAATACCCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCAAAGACATGGCTGGGTACGACGACGAGAATATTACggctg              <  2:450496/231‑1 (MQ=255)
                                                                                                                                                                                                                                     tggcGGTAAC‑CCGG‑CCGCCTGTTTTTTCGAAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCAAAGACATGGCTGGGTACGACGACGAGAATATTACGGCTGGCTGCCa       <  2:596010/236‑1 (MQ=255)
                                                                                                                                                                                                                                     tgccgttAAA‑CCGG‑CCGCCAGTTCTTCCGCAAACTTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCAAAGACATGGCTGGGTACGACGACGAGAATATTACGGCTGGCTGCCa       <  2:517312/233‑1 (MQ=255)
                                                                                                                                                                                                                                      gTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCAAAGACATGGCTGGGTACGACCAGCCGAATATTACGGCTGTGTGCCat      >  2:1227034/1‑238 (MQ=255)
                                                                                                                                                                                                                                           tAAC‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCAAAGACATGGCTGGGTACGACGACGAGAATATTACGGCTGGCTGCCAGCGCa  <  1:972481/238‑1 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                            
CGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAA‑CGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGCAAAGGTCTGATCGGTC‑GAGGCCAGCGAAATAGCTGTCGGTAAA‑CCTG‑CCGCCAGTTCTTTCGCAAACGTTGGGCCAGAGATAACCGCCAGCGGAATTTGATCGCCTAAGGCCTCACGCGCCACGTCCTGTAACAGACGTCCGGTTTCCGCTTCCAGCCCTTTGGTCGCCCACACCAGACGCGCATCAGGACGCATCAGTGGTTTAATCTGGCGCAGCACTTCACCAAAGACATGGCTGGGTACGACGACGAGAATATTACGGCTGGCTGCCAGCGCA  >  NC_000913/3782978‑3783448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A