Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F9 I0 R1
|
131 |
136.1 |
2723430 |
98.1% |
2671684 |
229.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,862,673 |
C→A |
16.1% |
pseudogene (930/1617 nt) |
glvC ← |
pseudogene, arbutin specific enzyme IIC component of PTS,enzyme, Transport of small molecules: Carbohydrates, organic acids, alcohols, PTS system, arbutin‑like IIB component, PTS system, arbutin‑like IIC component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,862,673 | 0 | C | A | 16.1%
| 94.9
/ 3.7
| 86 | pseudogene (930/1617 nt) | glvC | pseudogene, arbutin specific enzyme IIC component of PTS,enzyme, Transport of small molecules: Carbohydrates, organic acids, alcohols, PTS system, arbutin‑like IIB component, PTS system, arbutin‑like IIC component |
| Reads supporting (aligned to +/- strand): ref base C (37/32); new base A (2/12); total (42/44) |
| Fisher's exact test for biased strand distribution p-value = 8.26e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.03e-01 |
TGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAAT‑CAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑T‑TGCGGG‑AAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTA > NC_000913/3862437‑3862911
|
tGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAAT‑CAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAAC‑AACGGTGAAATGAACAGG‑AAAGTAAATTCCAGCG‑GTTCGGTAATT‑CCCCCCAGGATGGC‑GG‑GT‑ACGG‑T‑GGAGGG‑AGT‑GAG‑C‑aa > 1:238890/1‑239 (MQ=255)
catATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAAT‑CAGGCCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGGCATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑T‑TGCGGG‑AAT‑CAG‑c < 1:280803/226‑1 (MQ=255)
tatCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAAT‑CAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑G‑TGCGGG‑GATACGA‑C‑AAG‑CCC‑CCA‑Ctttt > 1:1223493/1‑239 (MQ=255)
tatCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAAT‑CAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAAG‑T‑TGCGGG‑AAT‑CAG‑C‑AAG‑CCCCCCC‑Ctttt > 1:441208/1‑239 (MQ=255)
gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAAT‑CAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAAG‑G‑TGCGGG‑AAA‑TCG‑C‑AAA‑CACCCCC‑CTTTTA‑ccc > 1:953200/1‑238 (MQ=255)
cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAAT‑CAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑GT‑AAGG‑G‑TGCGGG‑AAC‑TAA‑C‑CAA‑CCCCCCC‑CCTTTA‑CCCgg > 1:1288243/1‑238 (MQ=255)
cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAAT‑CAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGGAATT‑CCCACCAGCATGGC‑GG‑TT‑AAAG‑G‑TGCGGG‑CAT‑TCC‑G‑AAG‑CCCCCCC‑CTTTTT‑CCCg > 2:1200231/1‑238 (MQ=255)
tGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAAT‑CAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGGGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑T‑GGCGGG‑GAA‑CCG‑G‑AAA‑CCCGCCA‑CCTTTT‑ccccctt > 1:747996/1‑235 (MQ=255)
gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAAT‑CAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑G‑TGCGGG‑AAT‑ACG‑A‑CAG‑CCCGCCA‑CCTTTA‑TCCC‑Agttt > 2:1286358/1‑239 (MQ=255)
tGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAAT‑CAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TTAAAGG‑G‑TGGGGG‑AAG‑AAG‑A‑AAC‑CCCCCCC‑CTTTTC‑CCCC‑Atttc > 2:1138748/1‑237 (MQ=255)
cTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAAT‑CAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑T‑TTCGGG‑GAA‑CAG‑C‑CAA‑CCCCCCACCTTTTC‑CCCG‑TTTTTcgg > 1:908361/1‑237 (MQ=255)
cagtttttaaaaaagacagCGGTAAAACCCAATCAAG‑CACACCCCCCACCCAGTTGCCCACCACCACAAAAGAACAAAATGCCGGCGGAAATGGGGCCCGCCACCCGGGGTTGTACCGAAAACAGC‑AGCGGGAAAAGAAACGGG‑AAGGAAAATTCCAGCG‑GTCGGGTAATC‑CCCCCCAGAAGGGG‑GG‑TT‑AAGG‑T‑GGGGGA‑AAT‑CAA‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑Tg < 2:636822/220‑1 (MQ=255)
caccGGGATCAGGTTTTGCGATAAACCCGAGTCAAC‑CAGCCCCCCCCCATTGTCGCCCCCAA‑CCCAAAAGAGAAACATTACGGCCGACATGGAGGCCGCCAGCACGGCGTGTACCGCAAACAGA‑AACGGGAAAATGAACAGA‑AAGATAATTCCCGGCG‑GTTCGTTATTC‑CCCCCCTGCATGGG‑GT‑TT‑AAGG‑T‑TGGGGA‑AAC‑AAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCgg < 2:506774/236‑1 (MQ=255)
cATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAAT‑CAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑TAGG‑A‑TGCGGG‑AAT‑TAA‑C‑CAA‑CCCCCCC‑CTTTTA‑CCCC‑ACTTTTCGG‑TGCg > 1:368161/1‑238 (MQ=255)
tCGGGATCCAGTTTTGCGGTAAAACCTAGTCAAT‑CAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGGAT‑TGCGGG‑‑AT‑CAA‑C‑AAA‑CCCCCCC‑CCTTTA‑CCCC‑ATTTTTCCG‑TGCGGCa > 2:688805/1‑239 (MQ=255)
ggATCCAGTTTTGCGGTAAAACCTAGTCAAT‑CAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGCGGG‑TT‑AAGG‑G‑TGGGGG‑AGC‑ACG‑C‑AAA‑CCCCCCC‑TTTTTA‑CCCA‑TTTTTCCgggcgggaggg > 2:1118299/1‑230 (MQ=255)
gcaccAGTTTGGCGG‑AAAACCCAATCCATACAGCCCGCCGCCCCTCTCCCCCCCCA‑CACCAAAAAGATCCATTCCGGGAGACTTTGGGGCCGCAAGCCCGGGGGGTCCCGCAAAAAGC‑AGGGGTAAAATGAACAGG‑‑AGGTAAACTCC‑GCGCGGTCGGTAATTCCCCCCCAGCCGGGC‑GG‑TT‑AGGG‑T‑GGGGGC‑AAA‑AAG‑A‑AAG‑TCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTg < 2:892977/235‑1 (MQ=255)
gaGTTGTGCGATAAACCCTACTCAAC‑CCGCCCCCCCCCCATTTCCCCCACCA‑CAAAAAAGAGATACATAACGGTCGACATGGAGGCCGCCAGCAGGGCGTGTACCGCAAACAGC‑AACGGTGAAAGGAAAAGG‑AAGGAAAATCCCAGCG‑GTTCGGTAATC‑CCCACCAGCAGGGG‑GG‑TT‑AAGG‑T‑TGGGGA‑AAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTa < 2:908361/238‑1 (MQ=255)
cAGTTTTGCGGTAAAACCTAGTCAAT‑CAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑TAGG‑G‑TTCGGG‑GAT‑ACG‑C‑AAA‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTTCGG‑Tgggggcgcggaaga > 1:1141593/1‑229 (MQ=255)
aGTTTTGCGGTAAAACCTAGTCAAT‑CAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑G‑TTCGGG‑GAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTT‑CCCC‑GTTTTTCCG‑TGCGGCAGGGAAGGAc > 1:990994/1‑239 (MQ=255)
tCAAT‑CAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑G‑TGCGGG‑GAT‑AAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTTCGG‑GGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATACCCa > 1:353658/1‑238 (MQ=255)
cAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑GT‑AAGG‑G‑TGCGGG‑GAA‑CCG‑C‑AAA‑CCCCCCA‑CCTTTT‑CCCC‑ATTTTTCCG‑TGCGGGAGGGAAGAACATCGC‑CAAAA‑AAATACCCACAGCa > 2:270547/1‑238 (MQ=255)
ccGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑TAGG‑T‑TGCGGG‑AAT‑CAG‑C‑AAA‑CCCGCCA‑CCTTTA‑CCCC‑AATTTTCGG‑GGGGGGAGGGGAGTACAACTC‑CAaaa‑aaaaacccccccgcccaaaacg > 2:1085209/1‑220 (MQ=255)
aTGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑G‑TGCGGG‑GAT‑CAG‑C‑AAA‑CCCGCCA‑CTTTTA‑CCCC‑CTTTTTCGG‑TGCGGCCGCGAAGTACATCGC‑TCAAA‑AAAATCCCCCGGCACCCAAGA‑ATTTTGa > 1:312381/1‑239 (MQ=255)
ttGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGGAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑TAGG‑T‑TTCGGG‑GAA‑GAA‑C‑AAA‑CCCCCCA‑CTTTTA‑CCCG‑ATTTTTCCG‑TCCGGCCGTGAAGAACATCGC‑TAAAGAAAATCCCCACGCACCCACACA‑ttttttgtt > 2:505223/1‑235 (MQ=255)
tccccACCA‑CACCAAAGAGAACAATGAGGGTGGAAATGGAGGCCGCCAGCACGGGGTGTACCGAAAACAGC‑AACGGTAAAATGAACAGG‑AAGGTAAATCCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑T‑TGCGGA‑AAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTa < 1:688805/237‑1 (MQ=255)
gcccccccccccaaaaGAGAACCATTCCGGCCGCCATGGAGGCCCCCACCACGGCGTGTACCCAAAAAAGC‑ACCGGTGAAATGAACAGG‑AAGGTAATTTCCAGCG‑GTTGGGTAATT‑CCCACCAGCATGGG‑GT‑TT‑AAGT‑T‑GGCGGA‑AAT‑CAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTa < 1:824551/226‑1 (MQ=255)
gCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AATG‑G‑TGCGGG‑GAT‑CAG‑C‑CAG‑CCCGCCA‑CTTTTT‑CCCC‑ATTTTTCCG‑GGCGGCCGGGGAGTACATCGC‑TAAAA‑AAAATCCCACGGCCCCAAAAA‑ATTTTTAGTTa > 1:274649/1‑238 (MQ=255)
gCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑T‑TGCGGG‑AAT‑CAG‑C‑AAA‑CCCGCCC‑CTTTTA‑CCCG‑CTTTTTCCG‑GGCGGCAGTGGAGGTCAACCC‑CAAAA‑AAATGCCCACCGCCCCAAAGA‑TTTTTTAGGTa > 1:320884/1‑238 (MQ=255)
acca‑caccaAAGAGAGACAGCAGGGTCGAAAGTGAGGGCGCGACAGGGGTGATGACCGCAAAAAGA‑AACGGTGAAGT‑AACGGGAAAGGAAAATGCGAGGG‑GTGCGATATTC‑CCCACCAGGAGGGT‑GG‑TT‑AGGG‑G‑TGCGGA‑AAT‑CAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTg < 2:368161/239‑1 (MQ=255)
acca‑caacaAAGAGGAACATTACGAGCGAAATGGGGGCCGCCAGCCCGGCGTGTACCGAAAACACA‑AACGGTGAAATGAAAAGG‑AAGGAAAATCCCAGCG‑GTTCGGTAACC‑CCAACCAGGAGGGC‑GG‑TT‑AGGG‑T‑TGGGGA‑AAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTg < 2:1314339/239‑1 (MQ=255)
caccaAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑G‑TGCGGG‑GAT‑CAG‑C‑AAA‑CCCCCCA‑CCTTTT‑ACCG‑ATTTTTCCG‑TGCGGCCGTGGAGTACATCCC‑CAAAG‑AAAATCCCCCCGCACCAAAGA‑ATTTTTTGTTAACGTGCA‑gg > 1:1200607/1‑239 (MQ=255)
caAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑T‑TGCGGG‑AAT‑CAA‑C‑AAG‑CCCGCCA‑CCTTTT‑CCCG‑CTTTTTCGGCTGGGGC‑GGGGAGTACACCAC‑TAAAA‑AAAACACCACCACACCAAACA‑TTTTTgttgttcccgtctgggca > 2:308583/1‑222 (MQ=255)
agaTACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑TAGG‑T‑TGCGGG‑GAT‑CAG‑C‑CAG‑CCCCCCC‑CCTTTA‑CCCC‑GTTTTTCGG‑TGGGGCCGGGTAGGACAACGC‑TACAG‑AAAAGACCCCCGCCCCCAAGA‑tttttttgttgacaggccgggcgaaac > 2:444499/1‑216 (MQ=255)
tACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑G‑TGCGGG‑GAT‑TAG‑C‑CAG‑GCCGCCC‑CCTTTA‑CCCC‑ATTTTCCCG‑TGCGGCCGTGGAGGACAACGC‑TAAAG‑AAATGCCCCCGGGACCCAAAC‑TTTTTGAGTTACCGCGCA‑AGGCGAAAAccc > 2:1165510/1‑237 (MQ=255)
tACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGCAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GGTTT‑AAGT‑T‑TCGGGG‑AAT‑ACC‑C‑AAA‑CCCCCCC‑CTTTT‑‑CTCC‑ATTTTTCGG‑CGCGGGACCCAAAGGCATCGC‑TTCAA‑AAATGACCACCGCACCACACA‑TTTTTTAGCTAcaccgcagagcgtaacccc > 2:10665/1‑220 (MQ=255)
cATTGCGGGCGAAGTGGAGGCCGCCAGCACGGCGTGTACCGAAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATCCCAGCG‑GTTCGGTAATC‑CCCCCCAGCAGGGC‑GG‑TA‑AAGG‑T‑GGCGGG‑AAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCtt < 1:1118299/239‑1 (MQ=255)
cGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAAG‑G‑TGCGGG‑GAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTTCGG‑GGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCggg > 1:432679/1‑239 (MQ=255)
gTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAAG‑G‑TGCGGG‑GAA‑CAG‑C‑AAGCCCCCCCC‑CTTTTA‑CCC‑‑CTTTTTCGG‑GGCGGCAGTGGAGAACAACCC‑CAAAA‑AAAATCCCCCGGCCCCCAAGA‑ATTTTTAGTTTCCCTGGC‑GGGCAAAAACCCCCTCCCGGGa > 2:1343247/1‑239 (MQ=255)
tCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑T‑TGCGGG‑GAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑CTTTTTCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGACCCCGGCCCCCAAGA‑ATTTTGTGTTACCGTGCA‑GGGC‑AAAAACGCCCTCCGGGaac > 2:914463/1‑239 (MQ=255)
tCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑GT‑AAGG‑A‑TGGGGG‑GGC‑CAG‑C‑AAA‑CCCCCCC‑CCTTTT‑CCCGAATTTCCCGG‑GGCGGCGGGGAA‑AACACCGCACAAAC‑AAAT‑CGCACCGTACAAAAAA‑TTTTTGAGGTACACTGGATGGGC‑AAAACGGCTTCCCGGGaa > 2:49826/1‑239 (MQ=255)
cGACATGGAGGCCGCCACAGCGGCGTGCACCGAAAACAGC‑AACGTTGAAATGAACAGG‑AAGTAAAATTCCAGCG‑GTGCGGTAATC‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑T‑TGCGGG‑AAT‑CAG‑C‑AAC‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGaac < 2:274649/238‑1 (MQ=255)
cGACAGTGAGGCCGCCAGCAGGGCGTGTACCACAAACAAC‑AACGTAAAAATAAACGGG‑AAGGTAAGTCCCGGCG‑TTTCGTTAATC‑CCCCCCAGGATGGC‑GG‑TA‑AGGG‑T‑GGCGGA‑AAT‑CAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGaac < 2:284471/238‑1 (MQ=255)
gccAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAAG‑G‑TGCGGG‑GAT‑CAG‑G‑AAA‑CCCCCCA‑CCTTTACCCCG‑TTTTTCGAG‑GGGGGCGGGGAAG‑AAAACGC‑CAAAG‑AAAAGCCCACCGCCCCCAAAA‑ATTTTTTGTTACCGTGCC‑GGGC‑AAAACAGCCTTCCcggcaaaaacattttaacgg > 2:637816/1‑222 (MQ=255)
gccAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑GT‑AAGG‑G‑TGCGGG‑GAA‑CAA‑CAAAA‑CCCCCCC‑TTTTTT‑CCCC‑TTTTTCCGG‑GGGGGC‑GTGGAGAGCAACGC‑TAAAA‑AAAAGCCCCCCGCCCCAAAGACTTTTTTGTTTACCG‑GCC‑GGGCAAAAACCCCCTTCCGGGACAAAGGAtttagagg > 2:834755/1‑234 (MQ=255)
ggacgggggtgacccgaaaCAGCAAAGGGAGAAAGGAAAAGA‑AAGTAAAATCCCGGCG‑GTTCGTAAATC‑CCCCCAAGCAGGGC‑‑G‑TT‑AAGG‑G‑TGGGGGAAAC‑CAG‑C‑AGG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTc < 2:184499/223‑1 (MQ=255)
agggggtgtCCCGCAAACAGA‑AACGGTAAAATGAACAGG‑AAGGTAAATCCCGGGG‑GTTCGGTAATT‑CCCCCCAGCAGGGC‑GG‑TT‑AAGG‑T‑TGCGGA‑AAA‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTc < 1:338102/231‑1 (MQ=255)
acgtcgttcaCCACAAACAGC‑ATCTGTAAAATGAACAGG‑AAGATAAATCCCAGCG‑GTCCGGTAATC‑CCCCCCAGCATGGC‑GT‑TT‑GAGG‑T‑TGGTGA‑AAC‑CAG‑C‑ACG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTc < 2:159476/227‑1 (MQ=255)
ccGCAAACAAC‑AGGGGAAAAAGGAACGGA‑AGGGAAAATTCCAGCG‑GTGCGGAATTC‑CCCACCAGCGGGGG‑GT‑TT‑AAGT‑T‑GGGGGG‑AAC‑AAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTg < 1:444499/239‑1 (MQ=255)
caaaacgcc‑AACGGTGAAAGGAACAGG‑AAGAGAAACTCAAGCG‑TTGGGCTAATT‑CCCACCAGCAGGGC‑GG‑TT‑AGGG‑T‑GGGGGA‑AAA‑CAG‑C‑AAT‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTCCCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGaa < 2:925732/231‑1 (MQ=255)
acAAACAGC‑AAGGGAAAAAAAAGAAGG‑AGGGTAAATCCCGGCG‑GTGAGGTAATC‑CCCCCGAGCAGGGT‑GT‑TT‑AAGG‑T‑GGCGGG‑AAA‑CAG‑C‑AAC‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGaa < 2:234251/238‑1 (MQ=255)
aCAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑T‑TGCGGG‑AAT‑CAG‑C‑AAG‑CCCGCCC‑CCTTTA‑CCCC‑ATTTTCCCG‑TGGGGCCGGGAAGTACATCCC‑TAAAG‑AAAATTCCACCGCCCCCAAAA‑TTTTTTTGTTTACCTGCA‑GGGC‑AAAAACGCCCTCCCGGGACAACGATTTCAACGGCCCCGCGGCCCAACTGAActct > 2:396004/1‑239 (MQ=255)
aaCGGAGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCAGGGC‑GG‑TT‑AAGG‑T‑TGCGGG‑AAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAg < 1:1265340/239‑1 (MQ=255)
gagaaaaaaaCGGG‑AAGGAAAACCCCGGCG‑TTTC‑GTAATTCCCCACCAGCAGGGG‑GG‑TT‑AGGG‑T‑GGGGGG‑AAC‑CAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtg < 2:441208/230‑1 (MQ=255)
tGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑CT‑AACG‑T‑TGCGGG‑AAT‑CAG‑C‑AAG‑CCCGCCC‑CTTTTA‑CCCC‑ACTTTCCGG‑TGCGGCAGTGAAAAACAACCC‑TAAAA‑AAAAGCCCCCGCCCCCAAAGA‑CTTTTTTGTTACCCTCCA‑CGGC‑AAAACCGCCTTCCGGTGACAACCCTTTCAACGGGCCGGCCCGCCAACtataacctttaagagac > 2:1080034/1‑222 (MQ=255)
aaaTGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑TAAG‑T‑TGCGGG‑GAT‑CAG‑C‑AAG‑CCCGCCC‑CTTTTA‑CCCC‑ATTTTCCCG‑GGGGGGCGGGAAAGACAACGC‑TCAAA‑AAATACCCAAGGCCCCCAAAA‑TTTTTGTGTTACCCCGCA‑GGGG‑AAAACCCCCCTCCGGGGACAACCGCTTCAACGGCGCGGGGCTCCAAcccgacacattcagaatcag > 2:855493/1‑219 (MQ=255)
aaggacagtg‑AAGTTAATTCCCGGCG‑GTCCGCAAACC‑CCCACCGCCGTGGG‑GT‑TA‑AAGG‑T‑TGGGGA‑AAG‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTgcg < 2:1141593/230‑1 (MQ=255)
aaggAACAGG‑AAGGAAAATCCCAGCG‑GTTCGTTAATT‑CTCACCAGCAGGGC‑GT‑TT‑AGGG‑T‑GGCGGG‑AAT‑CAG‑C‑AAC‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTgcg < 1:1006323/236‑1 (MQ=255)
aagaaaCAGG‑AAGGAAAATTCCAGCG‑GTTCGTTAATC‑CCCCCAAGCAGGGC‑GG‑TT‑AAGG‑T‑GGCGGG‑AAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTgcg < 1:914463/235‑1 (MQ=255)
aaCAGG‑AAGGTAAATTCCAGCG‑GTGCGGTACTC‑CCCACCAGCAGGGC‑GG‑TT‑AAGG‑T‑TGCGGA‑AAC‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc < 1:1085209/237‑1 (MQ=255)
aaCAGG‑AAGGTAAATCCCAGCG‑GTTCGGTAATC‑CCCCCCAGCATGGG‑GG‑TT‑AAGG‑T‑GGGGGA‑AAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGccc < 1:165303/238‑1 (MQ=255)
cAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑G‑TGCGGG‑AAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTTCGG‑GGCGGCAGTGAAGTACATCGC‑CAAAG‑AAAAGCCCACGGCACCAAAGA‑TTTTTTAGTTACCGTGCC‑GGGC‑AAAAACGCCCTCCCGGGACAACGATTTCAACGGCTCGGGGCCCAAAACTAACTCTTTTCGATGCTCGGccccgc > 2:682382/1‑236 (MQ=255)
ccccggCATGGG‑GG‑TT‑AGGG‑T‑TGGGGA‑AAT‑CAG‑A‑AAC‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:505223/234‑1 (MQ=255)
ccccggCATGGG‑GG‑TT‑AGGG‑T‑GGGGGG‑ATA‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TTCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 2:1219011/234‑1 (MQ=255)
caccaGCATGGC‑GG‑TT‑AGGG‑T‑GGCGGG‑AAC‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:623841/239‑1 (MQ=255)
cacaaGCGTGGG‑GG‑TG‑AAGG‑T‑TGCGAG‑AAA‑CAG‑C‑AAC‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 2:1130817/239‑1 (MQ=255)
cacaaGCATGGC‑GG‑TT‑AAGG‑T‑TGCGGG‑AAA‑CAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:855493/239‑1 (MQ=255)
cacaaGCAGGGC‑GA‑TT‑AGAG‑T‑CGCGGG‑AAT‑CAG‑C‑AAG‑GCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:1308047/239‑1 (MQ=255)
cacaagtgggcggg‑TT‑AAGG‑T‑GGGGGA‑AAT‑CAG‑C‑AGG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:1200231/227‑1 (MQ=255)
ccaGCATGGC‑GG‑TT‑AAGG‑T‑TGCGGG‑AAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTg > 1:884646/1‑124 (MQ=255)
ccccggtaggggtggtaggg‑T‑TGGGGA‑AAG‑CAA‑C‑AAC‑CCCGCCA‑CTGGGA‑CCCG‑AGTGGCCGG‑GGCGGCAGGGAAGTACAGCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCTGTTCCTCTGTGTGCCGCCTTCCTCAGCTTccttac < 1:444949/221‑5 (MQ=255)
cgggcaggggggt‑AAGG‑TGTGCGGA‑AAT‑CAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCa < 1:396004/227‑1 (MQ=255)
ggtgcggggt‑AAGG‑T‑GGGGGG‑AAA‑CAG‑A‑AAG‑ACCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAg < 2:747996/229‑1 (MQ=255)
c‑GG‑TT‑AAGG‑T‑TGCGGG‑AAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATaaa < 1:270547/238‑1 (MQ=255)
c‑GG‑TT‑AAGG‑T‑GGCGGG‑AAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATaaa < 1:857521/238‑1 (MQ=255)
gtgtaaggg‑T‑TGGGAG‑AAT‑AAG‑A‑ACG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTGCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATaaa < 2:953200/231‑1 (MQ=255)
ggt‑AAGG‑G‑TGCGGG‑AAA‑CCGCC‑AAC‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAAc < 2:320884/236‑1 (MQ=255)
aaGG‑T‑GGCGGC‑AAA‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTcc < 2:1288243/239‑1 (MQ=255)
gg‑T‑TGCGGG‑AAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCACCAGCTGCCGGACCAAAGATAAACTGTCCGt > 1:564674/1‑239 (MQ=255)
g‑T‑TGGGGA‑AAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGt < 1:1343247/238‑1 (MQ=255)
t‑tGCGGA‑AAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGt < 1:886557/237‑1 (MQ=255)
cGGG‑AAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AACTGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACGACCTTCCGGGAACAACGATTTCACCGGCTCGGGGCTCAAACTGACCGCTTGTCGCTGCTGCGCCCAGGCCTTCTGAACTCCGCATTCAACACCTGCCGGAGCAACGAAAAACTCTGCGTAGATg > 2:721404/1‑239 (MQ=255)
cGGG‑AAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCACAAGCTGCCGGACCCAAGATAAACTGTCCGTAGATg > 2:125505/1‑239 (MQ=255)
aaaT‑TAG‑C‑AAC‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGaa < 1:1002779/237‑1 (MQ=255)
aagcAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAg < 1:671317/235‑1 (MQ=255)
t‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTa > 1:675449/1‑178 (MQ=255)
accAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAgtg < 1:1217169/237‑1 (MQ=255)
c‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCAAGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTa > 2:1251530/1‑239 (MQ=255)
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TGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAAT‑CAGACCTCCGCCCATGTTGCCCACCA‑CACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC‑AACGGTGAAATGAACAGG‑AAGGTAAATTCCAGCG‑GTTCGGTAATT‑CCCACCAGCATGGC‑GG‑TT‑AAGG‑T‑TGCGGG‑AAT‑CAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCG‑ATTTTCCGG‑TGCGGCAGTGAAGTACATCGC‑TAAAG‑AAATGCCCACGGCACCAAAGA‑TTTTTGAGTTACCGTGCA‑GGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTA > NC_000913/3862437‑3862911
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
