Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A4 F111 I1 R1	11	84.9	2903858	95.2%	2764472	142.6

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC	NC_000913	4,001,644	Δ5 bp	coding (220‑224/951 nt)	corA →	magnesium/nickel/cobalt transporter

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4001643	3 (0.040)	85 (1.010)	62/284	0.2	97.1%	coding (219/951 nt)	corA	magnesium/nickel/cobalt transporter
*	?	NC_000913	4001649 =	2 (0.020)	85 (1.010)	62/284	0.2	97.1%	coding (225/951 nt)	corA	magnesium/nickel/cobalt transporter

ATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4001505‑4001643

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTA  >  NC_000913/4001649‑4001785

gTGGCTTGATGTGGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCC                                                                                                                                         <  1:1366499/142‑1

gTGGATTGTTCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCGGGGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTTTTTGAAGACGACGACGGCCTGCATCTCC                                                                                                                                         <  1:237367/142‑1

ATGGTTTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAAGCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCC                                                                                                                                         <  1:829480/143‑1

 TGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAAACCGCACGGAAGTGGAGGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCT                                                                                                                                        >  2:468700/1‑143

    acTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTAGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCT                                                                                                                                     <  2:1188335/141‑1

      TGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTC                                                                                                                                   >  2:838010/1‑143

      TGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTC                                                                                                                                   <  2:810585/143‑1

         TCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTC                                                                                                                                >  2:1031373/1‑143

            cGTCGAACCTGACGACGACGAGCCACTGCGCGTACAATCTCAACCTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTT                                                                                                                             <  2:638143/142‑1

            TGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTT                                                                                                                             <  2:924866/143‑1

            TGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTT                                                                                                                             <  2:1196148/143‑1

             GTCGCACCGGGCGACGACGAGCGCCTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGAAGTCGCCGGCCTGCATCTCCTTCTTCTTCTTTG                                                                                                                            <  1:177106/143‑1

             GTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTGGGCCAGAGCCTGGCAACCCGCCCGGAATTTTTTTTCATGGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTG                                                                                                                            <  2:543631/143‑1

              TCGAGCCGGGCGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGA                                                                                                                           <  1:670888/143‑1

              TCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGATGGCCTGCATCTCCTTCTTCTTCTTTGA                                                                                                                           <  1:1221943/143‑1

               ggagCCGGAGGACGACGAGCGACTGCGCGTACAATCTGAACTGGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAA                                                                                                                          <  1:796041/139‑1

               CGAACCCGACGACGACGAGCGACTGCCCGTCGAATCTGAACTTGGCCAGAGCCTGGCAAGCCGCCCGGAACTGGAAGACATCGAATCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAA                                                                                                                          <  2:1159833/143‑1

                    tGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑C                                                                                                                   <  2:1395641/142‑1

                    CGGACGACGACGCGCGACCGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑C                                                                                                                   <  1:1278290/143‑1

                      GACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGACGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGCAGATG‑‑Ccg                                                                                                                 >  2:1085740/1‑141

                      GACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGG                                                                                                                 <  2:2345/143‑1

                      GACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGG                                                                                                                 <  2:1219916/143‑1

                         GACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGTCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAG                                                                                                              <  1:1329333/143‑1

                           CGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCGTCTTCTTTGAAGATG‑‑CGGAAGAT                                                                                                            >  2:319718/1‑143

                               GAGCGACTGCGCGTACAATCTGAACTTGGCCCGAGCCTGGCAACCCGCCCGGAACTTGATGACATCGAGGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACG                                                                                                        <  1:867056/143‑1

                                 ggtgCTGCGCTTACAATCGGAGCTTGGCCAGAGCTTGTGAACCCGCCCGGAACTGGTAGACAGCGAAGCATCGTGACGTTTCTTTTAAGACGACGACGGCCTGCATCTCTTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCC                                                                                                      <  1:1092313/139‑1

                                 GCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCC                                                                                                      <  1:886081/143‑1

                                  CGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCCCGTTTGTTCTGAGACTACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCG                                                                                                     >  2:668760/1‑143

                                  CGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGGTCCTGCCG                                                                                                     >  1:141913/1‑143

                                    ACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACCACCAACGCGCCGAGCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGT                                                                                                   <  2:1378126/143‑1

                                      TGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAA                                                                                                 <  2:1360466/143‑1

                                          CGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCC                                                                                             >  1:1292701/1‑143

                                           GTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCA                                                                                            <  2:1138681/143‑1

                                            TACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCAC                                                                                           <  1:60683/143‑1

                                            TACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCAGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCCTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCAC                                                                                           <  1:463879/143‑1

                                            TACAAGCTGGGCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCAC                                                                                           <  1:1104990/143‑1

                                               aacctggagTTGGCCAGAGCCTGGCAACCCGGCCGGAACTGGAAGACATCGAAGCAGCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAGCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGT                                                                                        <  1:211603/134‑1

                                                 gCTGACCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCAGCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGG                                                                                      <  2:200833/142‑1

                                                    GAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCAT                                                                                   >  2:785913/1‑143

                                                    GAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCAT                                                                                   >  1:484685/1‑143

                                                     tactgcggCAGAGTCTGGCAACCCGCTCGAAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGATGATT‑‑TTTTTGATTACGCCGGTAACTCCACTGTGGCATT                                                                                  <  1:106534/135‑1

                                                      cCTTGCCCGGACCCTGGCAACCCGCCCTGACCTGGAAGCCATCGAAGCATCGTCACGTTTCTTTGAAGACGACGCCGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTT                                                                                 <  2:551739/142‑1

                                                       cgTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA                                                                                <  1:1309927/141‑1

                                                       CTTGGCCAGCGCCTGGCCACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA                                                                                <  1:339690/143‑1

                                                        gttGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTAC                                                                               <  1:48505/140‑1

                                                        TTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTAC                                                                               >  2:1140200/1‑143

                                                        TTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTAC                                                                               >  2:78621/1‑143

                                                        TTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCGACTT‑‑AAGATGGTCGGAAGATCACGCCGGTAACTACACGGTGGCGTTTAC                                                                               >  1:1405028/1‑143

                                                         TGGCCAGAGCCTGGCACCCCGCCCGCAACTGGAAGCCATCGAAGCCTCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACC                                                                              <  2:648601/143‑1

                                                          tggCAGAGCCTGGCAACCCTCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACCGCCTGCATCTCCTTCTTCGTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCTCTGTGGCATTTAtta                                                                             <  1:252656/140‑4

                                                           GCCAGCGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCAT                                                                            <  2:598722/143‑1

                                                            CCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATC                                                                           >  2:171325/1‑143

                                                               GAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGT                                                                        >  2:1073279/1‑143

                                                                     GGCCACCGGCCCGGAACTGGGAGACATCGCAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTGTGAAGAGG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGT                                                                  <  1:1051432/143‑1

                                                                        AACCCGCCCGGAACTGGACGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGT                                                               <  1:839823/143‑1

                                                                             GCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTT                                                          >  2:45091/1‑143

                                                                                 GGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCCTCCGTGCTGGTCGTCTGTTTACT                                                      >  2:969756/1‑143

                                                                                   agCTGGAAGACATCGAAGCGTCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCGTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCT                                                    <  2:718191/141‑1

                                                                                     cggagcgatATCGGAGCATCGGGACGTGTCTGTGAAGGCGTCGACGGCCTGCATCTCCTGCTTCTTCGTTGCAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCAGTTACCAGCCGTGATGGTCGTCTGTTTACTCTGC                                                  <  1:543660/134‑1

                                                                                      tgcAAGACATCGAAGCATCGGCACGTCTCTTTGAAGACGACGACGGCCTGCAGCTCCTTCTTCTTCTTGGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCG                                                 <  2:1096205/140‑1

                                                                                        GAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGGAGATG‑‑AGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGGCTGTTTACTCTGCGTG                                               >  2:129064/1‑143

                                                                                        GAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTCACTCCACTGTGGCATTTACCATCCGTGATGGTCGGCTCTTTACTCTGCGTG                                               >  2:512268/1‑143

                                                                                        GAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTG                                               >  2:1094583/1‑143

                                                                                         AAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTACACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGA                                              >  2:158772/1‑143

                                                                                                  AAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACT                                     >  2:32758/1‑143

                                                                                                   AGCATCGGCACGTTTCGTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTG                                    <  2:383531/143‑1

                                                                                                     CATCGGCACGTTTCTTTGAAGAGGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCC                                  <  1:532741/143‑1

                                                                                                      agCGGCACCTTTGTTGTAAGACAACGACGCCCCGCAGCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCC                                 <  1:1199082/141‑1

                                                                                                       TCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTACTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTGTGTTTACTCTGCGTGGGCGTGAACTGCCag                                >  2:628031/1‑141

                                                                                                          GCACGGTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCGTTGGAGATT‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTT                             <  1:785428/143‑1

                                                                                                             ctTTTCTTTGAAGACGAGTACGCCCTGCATCTCCTTCTTCTGCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTC                          <  1:8122/141‑1

                                                                                                             cctgTCTGTGAAGACGACGACGGCCTGCAGCTCCTTCTTCTTCTTTGACGATG‑‑CGCACGATCACGCCGGTTACTCCACTGTTGCCTTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTC                          <  2:425834/139‑1

                                                                                                                 taaTTGAAGACGACGACGGCCGCCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCCCTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCT                      <  2:141913/140‑1

                                                                                                                 TCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCT                      <  2:347715/143‑1

                                                                                                                   TTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGCCTGT                    >  2:557261/1‑143

                                                                                                                    TTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTA                   <  2:80783/143‑1

                                                                                                                     TGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTAT                  <  1:668760/143‑1

                                                                                                                         GACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTCACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTA              <  2:546086/143‑1

                                                                                                                          ACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTAT             >  1:480328/1‑143

                                                                                                                            GACGACGGCCTGCATCTCCTTCTTCTTCTTGGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGC           <  2:649060/143‑1

                                                                                                                                ACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCCTCCCTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGC       <  1:785913/143‑1

                                                                                                                                ACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGC       <  2:1292701/143‑1

                                                                                                                                    CCTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGT   >  1:1002874/1‑143

                                                                                                                                     CTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTA  <  1:78621/143‑1

                                                                                                                                     CTGCATCTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTA  >  2:154064/1‑143

ATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4001505‑4001643

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATG‑‑CGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTA  >  NC_000913/4001649‑4001785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

N/A