Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F17 I0 R1 124 155.2 3079696 98.3% 3027341 226.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,481,881 A→C 17.1% T325P (ACC→CCC)  ynbD → putative phosphatase inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,481,8810AC17.1% 179.8 / 2.7 79T325P (ACC→CCC) ynbDputative phosphatase inner membrane protein
Reads supporting (aligned to +/- strand):  ref base A (50/10);  new base C (2/13);  total (52/27)
Fisher's exact test for biased strand distribution p-value = 6.84e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TCGCTACTCATAATTGGCCGTGGGTACGGTGGGCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATGGTTGTTATGTTACGGACACTGTAAAACCGTTAATGAAGCGAT  >  NC_000913/1481644‑1482119
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                               
tCGCTACTCATAATTGGCCGTGGGTACGGTGGGCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCa                                                                                                                                                                                                                                                 >  2:575431/1‑238 (MQ=255)
     aatCATAATTGGCCGTGGGTACGGTGGGCTTAGCGAGATAACAACAGGGAAAGATAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGCCATTGCCCTGCCGCTTCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGGCGGTGAGCAAAATGCATGCTGGGGTTTATTTGGGGGCGTTT‑CTACGACATATTCCGGGACAGAATGCGGTTCTGGTCGTAACCTTTg                                                                                                                                                                                                                                           >  2:411070/3‑239 (MQ=255)
     aCTCATAATTGGCCGTGGGTACGGTGGGCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTGGGGGGGTTT‑CCACGCCAGATTCCGGCACACAATGGGGTTGTGGACGTACCCtttt                                                                                                                                                                                                                                           >  2:580929/1‑238 (MQ=255)
     aCTCATAATTGGCCGTGGGTACGGTGGGCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGTCACAGAATGCGGTTCTGGACGTCACCTTTg                                                                                                                                                                                                                                           >  2:939941/1‑239 (MQ=255)
     aCTCATAATTGGCCGTGGGTACGGTGGGCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTg                                                                                                                                                                                                                                           >  1:53658/1‑239 (MQ=255)
     aCTCATAATTGGCCGTGGGTACGGTGGGCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTg                                                                                                                                                                                                                                           >  2:466028/1‑239 (MQ=255)
     aCTCATAATTGGCCGTGGGTACGGTGGGCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTg                                                                                                                                                                                                                                           >  1:1373139/1‑239 (MQ=255)
     aCTCATAATTGGCCGTGGGTACGGTGGGCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTg                                                                                                                                                                                                                                           >  1:251842/1‑239 (MQ=255)
     aCTCATAATTGGCCGTGGGTACGGTGGGCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGGGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGGATGCGGGTCTGGACGGCACCTTTg                                                                                                                                                                                                                                           >  2:469153/1‑239 (MQ=255)
           aaTTGGCCGTGGGTACGGTGGGCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTc                                                                                                                                                                                                                                     >  1:88483/1‑238 (MQ=255)
                 ccGTGGGTACGGTGGGCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGGCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGGTCTGGGCGTCCCCTTTG‑AATTGCCTcgcg                                                                                                                                                                                                                              >  2:811770/1‑239 (MQ=255)
                  cGTGGGTACGGTGGGCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCACTCGCgg                                                                                                                                                                                                                             >  2:1458004/1‑239 (MQ=255)
                               ggCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACaaaa                                                                                                                                                                                                                >  1:292910/1‑239 (MQ=255)
                                gCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAg                                                                                                                                                                                                               >  1:1500005/1‑239 (MQ=255)
                                gCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAg                                                                                                                                                                                                               >  1:174780/1‑239 (MQ=255)
                                  ttGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGGGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGCCCAGCCCCAAAAgc                                                                                                                                                                                                              >  2:344076/1‑237 (MQ=255)
                                           acaacacagggaaaagagggcAGGGGAAACCCCCCCCCCGCGGTTTACGGGCTGACTTGGCCCTGCCGCTCCGGGGTGTGGTTTCTTATGGTTGGGTTTTGTCGCCGCCGGGAGCCGGTGAGAAAAATGACTGCTGGTTTTTATTTGGGGGCGTTT‑CCACAACATATCCCGGCACAGAATGCGGTTCTGGCCGTCCCTTTTA‑ATTTCCCTCGCGGACGAGCCACAAAAGATCGACTCTa                                                                                                                                                                                                     <  2:170975/219‑1 (MQ=255)
                                                           tAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGAt                                                                                                                                                                                      >  1:561326/1‑237 (MQ=255)
                                                             ggggggggAAT‑CTCCCGCCGCCTTTTTACTGGCTAATATTGCCCGGCCGCAGCGGAATGTGGTTGTTTTTGGGTGGGTTTTGGCGGCGCGTGGGACGGGGAAGCAAAATGATTGCGGGTGTTTAGTTAGGGGCTTTT‑CCAAGACATATACCGGCACAGACGGCGGTTATGGCCGACAATTTTG‑AATCCCCCCGCGGAGGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCt                                                                                                                                                                                   <  2:288326/234‑1 (MQ=255)
                                                                       a‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCtggtgg                                                                                                                                                                        >  1:393328/1‑239 (MQ=255)
                                                                             cgcccgccGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCtggtg                                                                                                                                                                         >  1:288326/1‑233 (MQ=255)
                                                                                              cTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGCTGCTAGATCTGGCGGTTCCGGAAGAGGGGGAGCTcc                                                                                                                                                   >  2:262786/1‑238 (MQ=255)
                                                                                                gACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTCCCGGAAGAGGGGGAGCTCCGAc                                                                                                                                                >  2:944578/1‑239 (MQ=255)
                                                                                                       cccTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGt                                                                                                                                         >  1:748370/1‑239 (MQ=255)
                                                                                                         cTGCCGCATCGGGATGTGGCTGTCTAGGCGTTGTTTTGGTCGCCGCGGGGAGCGGGTGAGAAAAATGACTGCTGGTGTTTATTTGGGGGCGTTC‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACTTCCCTTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTgg                                                                                                                                       <  2:1173443/239‑1 (MQ=255)
                                                                                                           gccgattggggATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGAAAAATGACTGCTGGTGTTTATTTGGGGGCGTTC‑CCACGACATATCCCGTCAAAGAATGGGGTTCTGGACGTCCCTTTTG‑AATCCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCg                                                                                                                                     <  1:939941/231‑1 (MQ=255)
                                                                                                            ccGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGCAGAGAGGGTGCTCCGACAGGCCGTGGCGa                                                                                                                                    >  1:1031480/1‑239 (MQ=255)
                                                                                                             cgcttggggATGTGGTTGTCTATGGGTGTGTTTTGGCGTCGCGTGGAGCCGGTAAGAAAAATGGCTGCTGGTGTTTTTTGGGGGGGGTTT‑CCACGACATATTCGGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATCCCCGCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGa                                                                                                                                    <  2:1506256/232‑1 (MQ=255)
                                                                                                             cgctcggggTTGGGGCTGTTTTTGCGTTGGTTTTGTCGTCCGCGGGGGCGGGGGAAAAAAATGCCTGTGGGTGTTTTTTTGGGGGTGTTC‑CCACGACATAGTCCGCCACAGAATGTGGTTTGGGACGTCACCTTTG‑AATCCCCCCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGAt                                                                                                                                   <  2:1059973/233‑1 (MQ=255)
                                                                                                             cGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGAt                                                                                                                                   >  1:1263163/1‑239 (MQ=255)
                                                                                                                       tgtggttgtttgtgttgtGGTTTTTTGGCCGCCGGGGGCGGGTGAGAAAAAGGCCTGTGGGTGTTTTTTGGGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTGTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAAc                                                                                                                          <  2:1373139/221‑1 (MQ=255)
                                                                                                                              gtgattgggttggttgTGTCGTCCCCTGGAGCGTGTGAGCAAACTGACTGCGGGTTTTTATTTAGGCGCTTTC‑CCCCGCATTATTCCGTCACAGATTGTGGTTGGGTACGTCCCCTTTG‑ATTTCCCTCGGGGGCGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTAcgcg                                                                                                                  <  2:565210/231‑1 (MQ=255)
                                                                                                                              gTCGATGCGTTGGTTGTGGCGTCGCCGGGACCCGGGGAAAAAAATGACTGCGGGTTTTGTTTTAGGGGCGTTT‑CCAGCACATATCCCGGCAAAGAAGGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGGGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTAcgcg                                                                                                                  <  2:68777/239‑1 (MQ=255)
                                                                                                                               tCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGaa                                                                                                                                                                >  1:329098/1‑192 (MQ=255)
                                                                                                                               tCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGa                                                                                                                 >  1:1268576/1‑239 (MQ=255)
                                                                                                                                 tATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGCTGCTGGCTCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGTAACATTACGCGAag                                                                                                               >  1:1325614/1‑239 (MQ=255)
                                                                                                                                        tGGTTTTGTGTTGGCGTGGAGCGGGCGAGAAAAATGACTGCGGGTTTTTATGTAGGGGGTTTC‑CCACGACTTATACCGACAGAGAATGCGTTGATGGGCGTCCCCTTTG‑ATTTCCCGCGGGGAGGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAgg                                                                                                        <  2:251842/239‑1 (MQ=255)
                                                                                                                                         ggTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGCCTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGc                                                                                                       >  2:72998/1‑239 (MQ=255)
                                                                                                                                         ggTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGc                                                                                                       >  1:473975/1‑239 (MQ=255)
                                                                                                                                         ggTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGc                                                                                                       >  1:1064113/1‑239 (MQ=255)
                                                                                                                                         ggTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGc                                                                                                       >  2:63172/1‑239 (MQ=255)
                                                                                                                                         ggTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGc                                                                                                       >  1:183421/1‑239 (MQ=255)
                                                                                                                                         ggTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGc                                                                                                       >  1:405303/1‑239 (MQ=255)
                                                                                                                                                gctgcgCCGGGGGCGGGTGACAAAAAAGACTGCGTGTGTTTATTTAGGGGCGTTC‑CCCAGACATATTCGGGCAGAGAAGGGGTTTCTGGCCTTCCCCTTTG‑ATTTCCCGCGCGGGCGAGCCAGAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGtt                                                                                                 <  2:405303/234‑1 (MQ=255)
                                                                                                                                                  gtcgCTGGGGGCCGGTGAGAAAAATGCCTGGTGGTTTTTATTTGGGGGTGTTT‑CCACGACATATCCCGGCACAGAATGGGGTTCTGGACTTCCCCTTTG‑AATTCCCTCGGGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTg                                                                                              <  1:575431/239‑1 (MQ=255)
                                                                                                                                                    cgCCTGGCGCGGGGGACAAAAAGTCCTGGTGGTGTTTATTGA‑GGGCGTTTCCCACAACATATCCCGGCACAGAATGCTGTTCTGGACTTCTCCTTTG‑AATCCCCCCGCGGGCGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGt                                                                                            <  2:1255233/239‑1 (MQ=255)
                                                                                                                                                    cgCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTgg                                                                                             >  1:459728/1‑238 (MQ=255)
                                                                                                                                                    cgCATGGAGCCAGTGACCAAAATGACTGCGGTTTTTTATCTGGGTGCTTTC‑CCTCACCTTATTCCGCCACAGAATGCGTTTCTGGCCTTTCCTTTTG‑AATCCCCTGGGGGCCGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGt                                                                                            <  2:292910/239‑1 (MQ=255)
                                                                                                                                                     gCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGt                                                                                            >  2:1477657/1‑238 (MQ=255)
                                                                                                                                                        tGGTGCCGTTGAGCAAAAGGACTGGTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCAt                                                                                        <  2:1263163/239‑1 (MQ=255)
                                                                                                                                                         ggAGCCGGTGAGAAAAATGACTGCTGGTGTTTATTTAGGGGCGTTC‑CCACAACATCTCCCGGCAAAGAATGCGGTTCTGGACGTCACCTTTA‑AATTCCCGCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCAt                                                                                        <  1:1458004/238‑1 (MQ=255)
                                                                                                                                                          gAGCGGGTGAGCAAAATGAGTGCTGGTGTTTTTTTAGGGGCGTTT‑CCACAAATTTTTCCGGCACAGAATGCGGTTCTGGACGTCCCCTTTG‑AATTCCCCCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCAtt                                                                                       <  1:1279468/238‑1 (MQ=255)
                                                                                                                                                                gTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCAtt                                                                                >  1:1472413/1‑239 (MQ=255)
                                                                                                                                                                     cAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGAt                                                                           >  2:797750/1‑239 (MQ=255)
                                                                                                                                                                             gtgctgGTTTTTATTTAGGGGGTTTT‑CCAGGACATATTGGGGCACAGAATGGTGTTGTGGACGTC‑CCTTTGAAATCCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATcgcg                                                                    <  2:419814/237‑1 (MQ=255)
                                                                                                                                                                             ctgtgggTTTTTTTTTGGGGCCGTTC‑CCACCCCAGATTCCGGAACAGAAGGGGGTTCGGGTCGTCCACTTTG‑AATCCCCTGGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATcgcg                                                                    <  2:459728/233‑1 (MQ=255)
                                                                                                                                                                                      tttatttaGGGGCTTTT‑CCACGACATGTTCCGTCACAGAATGGGTTTCTGGACGTCCCCTTTG‑AATCCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCtg                                                          <  1:1446713/239‑1 (MQ=255)
                                                                                                                                                                                       ttttttaGGGGTGTTT‑CCCCGACATATCCCGGCACAGAATGCGTTTGTGGACGTCACTTTTG‑AATTCCCTCGCGGCCGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCtgg                                                         <  1:580929/236‑1 (MQ=255)
                                                                                                                                                                                           ttaGGGGGTTTT‑CCACGACGTGTCCCGGCACAGAATGGGGTTCTGAGCGTCCCCTTTG‑AATCCCCCGGGGGGCGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCtggtggt                                                     <  2:473975/239‑1 (MQ=255)
                                                                                                                                                                                             aGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCtgggggtgg                                                   >  2:1535843/1‑239 (MQ=255)
                                                                                                                                                                                              ggggCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTAcgcg                                                                                                                  <  2:193879/175‑1 (MQ=255)
                                                                                                                                                                                              ggggCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTAcgcg                                                                                                                  >  1:193879/1‑175 (MQ=255)
                                                                                                                                                                                              ggggCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTggc                                                  >  1:223491/1‑239 (MQ=255)
                                                                                                                                                                                              gggcCGTTC‑CCACGAAATATCCCGGCACAGAAGGCGTTTCGGGCCGTCCCCTTTG‑AATCCCCCCGGGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCtggtggtgg                                                   <  2:223491/238‑1 (MQ=255)
                                                                                                                                                                                                  tgTTT‑CGCCGACATATGCCGGCAAACAATGGGTTCCTAGACTTCACCGTTG‑TATCCCGTGGGTGTAGAGCCACAAAAGATCGACTCTATTTGTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCa                                              <  2:1031480/238‑1 (MQ=255)
                                                                                                                                                                                                  cGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCa                                              >  2:377919/1‑239 (MQ=255)
                                                                                                                                                                                                   gTTC‑CCGCGACATATCCCGGCAGAGAATGGGGTTCGGGACGTCTCTTGTA‑AATCCCCGCGCGCACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCa                                              <  2:393328/238‑1 (MQ=255)
                                                                                                                                                                                                    ttt‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCAATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGGGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATg                                            >  1:649955/1‑239 (MQ=255)
                                                                                                                                                                                                    gttccaaggACATATTCCGGCACAGAAGCCGGTTGTGAACATCTCCTTTA‑AATCCCCCCCCGCACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCa                                              <  1:344076/230‑1 (MQ=255)
                                                                                                                                                                                                                 atTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATGGTtgttatgtt                                 >  2:130051/1‑238 (MQ=255)
                                                                                                                                                                                                                 atTCCGGCACAGAATGCGGTTCTGGACGCCACCTTTG‑AACTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGACGCTGGATCTGGCGGCTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGCAGAGCAAGGCAGCGTTCTGGTCCATTGAGCATTGGGATTATCGCGCAGCGCGCTGGTGGTGGCGGCATGGTtgttatgtt                                 >  2:281828/1‑238 (MQ=255)
                                                                                                                                                                                                                        cacaGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATGGTTGTTATGTTACGGac                           >  1:1316437/1‑237 (MQ=255)
                                                                                                                                                                                                                        cacaGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATGGTTGTTATGTTACGGac                           >  1:921509/1‑237 (MQ=255)
                                                                                                                                                                                                                        cacaGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATGGTTGTTATGTTACGGac                           >  1:422254/1‑237 (MQ=255)
                                                                                                                                                                                                                             aaTGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATGGTTGTTATGTTACGGACACTGTaa                    >  1:550452/1‑239 (MQ=255)
                                                                                                                                                                                                                             aaTGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATGGTTGTTATGTTACGGACACTGTaa                    >  2:20289/1‑239 (MQ=255)
                                                                                                                                                                                                                                       tGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATGGTTGTTATGTTACGGACACTGTAAAACCGTTAAt          >  1:886619/1‑239 (MQ=255)
                                                                                                                                                                                                                                       tGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATGGTTGTTATGTTACGGACACTGTAAAACCGTTAAt          >  1:686271/1‑239 (MQ=255)
                                                                                                                                                                                                                                       tGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATGGTTGTTATGTTACGGACACTGTAAAACCGTTAAt          >  1:140104/1‑239 (MQ=255)
                                                                                                                                                                                                                                         gACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATGGTTGTTATGTTACGGACACTGTAAAACCGTTAATGa        >  1:1256412/1‑239 (MQ=255)
                                                                                                                                                                                                                                               aCCTTTT‑ATTCCCCCCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATGGTTGTTATGTTACGGACACTGTAAAACCGTTAATGAAGCGAt  <  1:811770/239‑1 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                               
TCGCTACTCATAATTGGCCGTGGGTACGGTGGGCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAA‑CTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTT‑CCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTG‑AATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATGGTTGTTATGTTACGGACACTGTAAAACCGTTAATGAAGCGAT  >  NC_000913/1481644‑1482119

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A