Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F9 I0 R1
|
142 |
103.7 |
2603848 |
81.8% |
2129947 |
227.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,996,585 |
T→G |
13.9% |
G100G (GGT→GGG) |
xerC → |
site‑specific tyrosine recombinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,996,585 | 0 | T | G | 13.9%
| 440.5
/ 12.6
| 172 | G100G (GGT→GGG) | xerC | site‑specific tyrosine recombinase |
| Reads supporting (aligned to +/- strand): ref base T (43/97); new base G (25/5); total (70/102) |
| Fisher's exact test for biased strand distribution p-value = 1.47e-07 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 173 total aligned reads displayed.
CCCGATAACCCTGCTTAACTACCAGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTGGGGCTGGATATTAAACACCTCGACCTGGAGTCTGGTGAAGTGTGGGTTATGGGGAAAGGCAGCAAAGAGCGCCGC > NC_000913/3996351‑3996819
|
cccGATAACCCTGCTTAACTACCAGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAATGAACTCAAAGCTA‑ACCCGGCGAAA‑GGGGtt > 2:1150407/1‑238 (MQ=255)
cgttAACCCTGTTTAACGTCCAGCCTTAGCTTGAGGCGATTATCAATTTTGCCAGCGAAAACGGCCTGCAATGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCg < 2:541007/236‑1 (MQ=255)
aTAACCCTGCTTAACTACCAGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGGGAAA‑GGTGTTTCgg > 2:183165/1‑238 (MQ=255)
aTAACCCTGCTTAACTACCAGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCgg > 2:86082/1‑238 (MQ=255)
tAACCCTGCTTAACTACCAGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCCGAACAAAACCAAAGCTA‑ACCCCCGGAAA‑AGGGTTTTGGc > 1:472034/1‑238 (MQ=255)
cTGCTTAACTACCAGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGCCTTTCTGGGTTACGTAGCTTTTTTGCATGGTGGGGGAGCCCACACGAACCCAAA‑CTATACCCGGCGAAAGGGTGTTCGGGCA‑cgaa > 1:154479/1‑236 (MQ=255)
cTTAACTACCAGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTCCGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGTTGGTCAGCCAGAACGAACTCCAAGCTA‑ACCCGGCGGAA‑GGGGTTTCgccccgcaacac > 1:789551/1‑228 (MQ=255)
cTTAACTACCAGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGaaac > 2:671339/1‑237 (MQ=255)
cTTAACTACCAGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGGGTTTCGGCA‑CCGAAAg > 2:847920/1‑238 (MQ=255)
cTTAACTACCAGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCACCCCGAACGAACTCAAAGCTA‑ACCCGCCGAAA‑GGTGTTTCGGCA‑CCGAAAg > 2:425197/1‑238 (MQ=255)
cTTAACTACCAGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACC‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCACGTCTGGCGTTACGGCTTTCTGCGCTCCGTTGCTTTTTTCACAGGCTGGTAAGCCAGGACGAACTCAAAACGA‑ACCCGGGGAAA‑GAGGTTTCGGGA‑CCGAAAg‑c > 1:312069/1‑239 (MQ=255)
ttAACTACCAGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGGGTTTCGGCA‑CCGAAAg‑c > 2:1283580/1‑238 (MQ=255)
cTACCAGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGCCTGGCTGGGCACCCAGAACGAACTCCAAGCTA‑ACCCGGTGAAA‑GGGGTTTTGGCA‑CCGacaaacccac > 1:845942/1‑230 (MQ=255)
aGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTTACGATGGTGCGCAATTTT‑GCTGTACG‑CAGCCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCCGCCCGCACCAACTCCAAACTA‑ACCCCGCGCAA‑GGGGTGTGGGAACCCGAAAG‑ccccaccaa > 1:493770/1‑233 (MQ=255)
aGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCCGCCGGAACGAACTCAAAGCTA‑ACCCGGCGACA‑GCGGTTTC‑GCG‑CCGGAAGACGCCGGGTCAt > 2:1125481/1‑239 (MQ=255)
aGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGGTTCGGCA‑CCGAAAG‑GGCCGCGTCa > 2:10234/1‑238 (MQ=255)
ggggccggttggggtaattataaaTTTTTCCAGCGAAAAGGGCCTGCAAAGCTGGCGGCAAGTGGATGTGACGATGGTGCGCAAGTTT‑GCTGTGCG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCCAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATc < 1:1150407/217‑1 (MQ=255)
gTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCAt < 2:235607/236‑1 (MQ=255)
tCAGCTTGAGGTGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTTGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTTGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑g < 2:729724/238‑1 (MQ=255)
tCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑g < 2:261539/238‑1 (MQ=255)
aGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGGGTTTCGGCA‑CCGAAAG‑CGCCCCCTCACCT‑GCCg > 2:93540/1‑239 (MQ=255)
ttGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTG‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGaaa < 1:522190/239‑1 (MQ=255)
aGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGAAAAGGGC‑GGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAACTTTTTTAACTGGCTGGTCCGCCAGAACGAACTCAAAGCCA‑ACCCGGCGGAA‑GAGGTTTCGGCA‑CCCAAAA‑CGCCGCGTCAACG‑CCCGgaaaaa > 1:1230265/1‑238 (MQ=255)
gCGATCATCAATTGTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACa < 2:134638/238‑1 (MQ=255)
agATCAGCAATTTTGCCAGCGAAAACGGCTGGCAAAGCTGGCAGCCATGTGATGTGAAGATGGTTCGCAATTTT‑GCTTTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACAt < 2:1145281/237‑1 (MQ=255)
tcatcaATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTCCG‑CAGTCGCCGTCAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTACCTTTTTTGACTGGCTGGTCGGCCCCAACGCACTCCAAGCTA‑ACCCGGCGAAA‑AGAGTTTTGGGC‑CCGAAAC‑GGACGCGGCACCT‑GCCAACAAAAAtccca > 1:1033942/1‑236 (MQ=255)
caATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACAtcgacgtcg < 2:845942/239‑1 (MQ=255)
aaTTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACAtcgacgtcga < 2:247910/239‑1 (MQ=255)
gAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCg > 2:1188190/1‑239 (MQ=255)
aCGGCCTGGAAAGCTGGCATGAATGTGATGGGGCGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGGCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGgctg < 2:1175408/239‑1 (MQ=255)
aCGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGgctg < 2:990753/239‑1 (MQ=255)
cGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑GAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGgctgc < 2:565088/239‑1 (MQ=255)
ccTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGGCAGCCAGAACGAACTCAAAGCTA‑ACCCGTCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAAAAtccacgtcgcgaacagaaatcggcggcggg > 1:1190965/1‑218 (MQ=255)
gaaaaGCTGGCAGCAATGTGATGGGGCGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGata < 2:220152/237‑1 (MQ=255)
aaaGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑tt < 2:370791/239‑1 (MQ=255)
aaggtgggcgcaATGGGTTGTGGCGTGGGTGCCAAATTTT‑GGTGGACGACTGT‑GCCGGAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑AGCCGTCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑tt < 1:583569/229‑1 (MQ=255)
tGGCAGCAATGGGATGGGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGGCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGat < 2:121959/237‑1 (MQ=255)
gtggagcaGTGTGATGTGGGGATGGTGGCCAATTTG‑GCTTTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGAAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTTGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGatat < 1:304002/235‑1 (MQ=255)
gtgcagcaATGGTGTGTGTAGGTGGTGCGCAATTTTGGCTG‑ACC‑CAGTCGCCGTAAAGGGC‑TGGGAAGAGTAAGTCTGGAGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGATA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGat < 1:922445/235‑1 (MQ=255)
atgtgatgggACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATACCAATGATc < 2:1194760/239‑1 (MQ=255)
tgtgatggtaCGTTTGTGGGGAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TTGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATcc < 2:153599/239‑1 (MQ=255)
gttaggtgaCGATGGTGCACAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGGGAAGCAAGTCCGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATccc < 2:912029/234‑1 (MQ=255)
ttgtccttttggtctcattttt‑TCTGTACG‑CATGTGGCGGCAAGGGT‑TGGTGGCAGCAATGTTTGCGTTACGGGTTTTTGCGCTACGTAGCTTTTTTGACTGGGTGGTCCGCCAGAACGAACCCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCg < 1:586747/221‑1 (MQ=255)
ttggagggtGGGGCGCAATTTG‑GTTGTACG‑CGGTGGCCGTAAAGGGT‑GAGGACCAGGAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGTTTTTTTGACTGGCTGGTCAGCCAGAAGGACCTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCg < 1:10234/231‑1 (MQ=255)
tgtgaCGGTGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCg < 2:789551/239‑1 (MQ=255)
tgtgaCGAGGGTGCGCAATTTT‑GCTGTACG‑CATGCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCg < 2:654919/239‑1 (MQ=255)
tgggaCGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCg < 2:493770/236‑1 (MQ=255)
tggaggttGGTGCGCTGTTTT‑GGTGTATG‑CATTCGCCGTAAAGGGC‑TGGGGGCGGCAAGTCTGGCGTTACGGCTTTCTGCGCCACGTAGCTTTTTTGACTGGCTGGGCAGCCAGAACGAACTCAAAGCTA‑ACCCGGAGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCg < 1:341496/231‑1 (MQ=255)
gggaCGATGGTGCGCAATTTT‑GCGTTACG‑CAGTCGCCGGAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCg < 2:513755/236‑1 (MQ=255)
tggcccAATTTT‑TGTTTCCG‑CGGTCGCCTGTAAGGTG‑TGGGAGCCGCAAGCCTGGGGTTCCGGCTTTCTGCCCTCCGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGa < 1:1271095/234‑1 (MQ=255)
gTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGGGTTTCGGCA‑CCGCAAG‑CGCCGCGTCATCT‑GCCGCAACACATCAACGTCGACGGTATGAATCGGCTGCTGGGTC‑TTCATATTCGTGATCCCCTCGCTGTAcgga > 2:447703/1‑236 (MQ=255)
tGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGa < 2:532641/238‑1 (MQ=255)
tGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGa < 2:1030905/238‑1 (MQ=255)
tGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGa < 2:984905/238‑1 (MQ=255)
ttgtgatgtttgactgacggtggcgcgGTAAAGGGC‑TGGGTGCAGCTAGTCTGGCGTGACGGCAGTCTGCGCTACGTAGCTTTTTTGACTGGCGGGTACTCCAGAACGAACTCAAAGCTA‑ACCAGGCGAAA‑GGTGGTTCGGCA‑CCTAAAG‑CGCCTCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATTTCAATGATCCCCTCGCTGTACTCGa < 1:603136/215‑1 (MQ=255)
aaTTTT‑GCTGTACG‑GAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGc < 2:583138/239‑1 (MQ=255)
aTTGT‑GCGGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGc < 2:217486/238‑1 (MQ=255)
tttt‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCaa < 2:67387/239‑1 (MQ=255)
tggttctgctggcGCTGTAAAGGGCGTGGGTG‑TGCTAGGCTGGGTTTACCGCTTTCCCGGCTTGGTAGATTTGTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCT‑GCGAAGG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGGCGATATGAATCGGCTGCTGGATA‑TGGATATCAATGATCCCCGCGCTGTACGCGAGCGTGCAATGCt < 1:175600/227‑1 (MQ=255)
cG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCgg > 1:670865/1‑180 (MQ=255)
cG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGt > 2:1002955/1‑239 (MQ=255)
cG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCCCTGAACCCGCCCGGGCAATTCTGCAAgg > 2:1209603/1‑238 (MQ=255)
gTCGCCGTAAAGGGC‑TGGGAGCAGCAAGGCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAAATCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATg < 2:1262048/239‑1 (MQ=255)
aaaGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTTCGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGgcg < 2:886634/238‑1 (MQ=255)
aaGGGC‑GGGGGCAAGTAAGTCGGGCGTTCAGGCTTTCTGGGCTACGTAGGTTTTTGTACTGGACGGGCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGAA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGgcgc < 1:784600/238‑1 (MQ=255)
gggC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCC‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGGTATGAAACGGCTGCTGGATATTTGAT‑TCAATGAACCCCCCGCTCTACGCGACCCTGCAATGCttggaggtaaggacggccgggg > 1:190291/1‑218 (MQ=255)
tGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTTTACGCGACCGTGCAATGCTGGAAGTGATGGACGGGCCGGGGCTg > 2:354459/1‑239 (MQ=255)
tGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATg > 1:484526/1‑212 (MQ=255)
tGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATTTACGGCCCGGGGCt > 2:425126/1‑238 (MQ=255)
ggAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGGGCAATGCTGGAAGGGATGTACGGCGCGGGCCTGCg > 2:1055865/1‑239 (MQ=255)
agcaAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATTCGCGTCTGCGCACTGAAACGGCCGCTGGATA‑TTGATATCAATGATCCCCCCCCTTTACGCGACCGTGCCATGGTGGAAGGGATGTACGGCGACGGTCTgaggctc > 1:944358/1‑232 (MQ=255)
agcaAGTCTGGCGTTACGGCTTTCTGCGCTACGGAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACGCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGata < 1:236167/170‑1 (MQ=255)
gcaAGTCTGGCGTTACGGTTTTCTGCGGTACGTAGTTTTTTTTACTGGCTGGGACGCCCAAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCttt < 1:550965/238‑1 (MQ=255)
gCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGATA‑GGCGTTTCGGCA‑CCGCAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGAGATGTAGGGCGCGGGTCTGCGTCTTTCTGAGCtggt > 2:151039/1‑239 (MQ=255)
gCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATc > 2:712315/1‑142 (MQ=255)
cGGGTTTCCGCGCTACGTAGCTTTTTTGACTGGCTGGCAAGTCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTGGGGCt < 2:92371/239‑1 (MQ=255)
cGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGGGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTGGGGCt < 2:1033942/239‑1 (MQ=255)
cGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGCCGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTggg > 2:604123/1‑236 (MQ=255)
cGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTggg > 2:1055793/1‑236 (MQ=255)
cgcCACGTAGCTTTTTTGACTGGCTGGGCAGGCAGAAAGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTGGGGCTGGATATTaaa < 2:262266/239‑1 (MQ=255)
cTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGCCGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCCGGTCTGCGTCTTTCTGCGCCGGTGGGGCTGGATCTTaatc > 2:422617/1‑236 (MQ=255)
aCGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTGGGGCTGGATATTAAACAcc < 2:472034/239‑1 (MQ=255)
tttttGACGGGATGGTCCGCGAGAACGAGCGCAAAGCTA‑TCCAGGCGAAA‑GGTGATTCGGCA‑CCGAAAG‑CGCCGGGTCATCT‑GCCGAAAAACATCGACGTTGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTGGGGCTGGATATTAAACACCTCGACCTg < 1:86082/239‑1 (MQ=255)
ttttGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCgg < 2:767289/115‑1 (MQ=255)
tttGACTGGTTGGCCAGCCAGAACGAACCCAAAGGCA‑GCCCGGGAAAG‑GGTTTTTCGGCA‑CCGAAAG‑CGCCGGGTCATCT‑GCCGAAAAACATCGACGGTGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTGGGGCTGGATATTAAACACCTCGACCTGGa < 1:425197/239‑1 (MQ=255)
ttGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCC‑CCGAAAG‑AGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGGCGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATGCCCTCGCTGTAAGCGACCGGGCAATTGTGGAAGTGAGGTACGGGGCGGGGCTCCGCCTTTTTGGGCGGGTGGGGCGGGGTGTTAAAAACCTCGCCTTgggg > 1:1261182/1‑237 (MQ=255)
ttGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGACCTGGTGGGGCTGGATTTTAAACACCTGGCCCTgggg > 2:1265766/1‑237 (MQ=255)
ttGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGCTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCGGTACCGGACCGTGCAATGCTGGAAGGGATTGACGGCGCGGGTTTGCGTCTTTCTGCGCTGGTGGGGCTGGGATTTAAAAACCTGGCCCTGGAg > 2:1107704/1‑239 (MQ=255)
gttggTCAGCTAGAACGAAAGCAAAGCTA‑ACCCGGCGAAA‑TGTTTTTCGGCA‑ACGAAAG‑CTCCGGCGCCGCG‑GCCGAAAAACATCGACGTTGACGAGATGAATCGGCTTCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTGGGGCTGGATATTAAACACCTCGACCTGGAGTCTGGTg < 1:615657/237‑1 (MQ=255)
gttgggcgccgaaacgaacTGAAAACTA‑ACCCGGCGAAA‑GGTGTTTCGGGA‑CCGAAAG‑CTCCGCGGCATCT‑GCCGAAAAACATCGACGTCGACGATAGGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTGGGGCTGGATATTAAACACCTCGACCTGGAGTCTGGTg < 1:1055865/226‑1 (MQ=255)
ctggTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTGGGGCTGGATATTAAACACCTCGACCTGGAGTCTGGTg < 2:266549/238‑1 (MQ=255)
gtggggcagagagaacGCAAAGCTG‑ACCGAGCGAAC‑GGGTGTGCGGCC‑CCGCAAG‑CGCCG‑GTTTCCTCGCCGAAAAACATCGACGGCGACTATACGAAGCGGCTGCTGGATA‑TGGATTTCAATGATCCCCTCGCTGTACGCGGCCTTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTGGGGCTGGATATTAAACCCCGCGACCTGGAGTCTGGTGAAgt < 1:716454/227‑1 (MQ=255)
gTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTGGGGCTGGATATTAAACACCTCGACCTGGAGTCTGGTGAAgt < 2:336394/239‑1 (MQ=255)
aacTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTGTTTCTGAGCTGGGGGGGCTGGATATTAAACACCTCGACCTGGGGTCTGGTGAAGTGTGGGGTATgggg > 2:355113/1‑239 (MQ=255)
cccAAAGCTA‑ACCCGGCGAAA‑GGGTTTTCGGCC‑CCAAAAG‑GGCCGCGTAATCT‑TCCGAAAAACAGCGACGTCGACGTTATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTGGGGCTGGATATTAAACACCTCGACCTGGAGTCTGGTGAAGTGTGGGTTATGGGGaa < 1:1218172/237‑1 (MQ=255)
aaGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGGCTGCGTCTTTCTGAGCTGGTGGGGCTGGATATTAAACACCTCGACCTGGAGTCTGGTGAAGGGTGGGTTATGGGGAAAGgc > 2:600767/1‑239 (MQ=255)
aGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTGGGGCTGGATATTAAACACCTCGACCTGGAGTCTGGTg < 2:487448/215‑1 (MQ=255)
aCCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGGTGGAAGTGATGGAAGGCGCGGGTCGGAGGCTTTCTGGGCTGGGGGGGCGGGTAATTAAACACCCCGACCGGGGGCCGGGGGAGTGGGGGGTTTGGGGGAAAggacaaaag > 1:804880/1‑232 (MQ=255)
cGGCGAAG‑GGGTTTTCGGCC‑CCTAAAG‑GGCCGCGTCATCT‑GGCGAAAAACTACGGAGTGGACGATATGAATCGTCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCGGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTGGGGCTGGATATTAAACACCTCGACCTGGAGTCTGGTGAAGTGTGGGTTATGGGGAAAGGCAGCAAagag < 1:143322/239‑1 (MQ=255)
gCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCg > 2:59785/1‑152 (MQ=255)
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CCCGATAACCCTGCTTAACTACCAGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTT‑GCTGTACG‑CAGTCGCCGTAAAGGGC‑TGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTA‑ACCCGGCGAAA‑GGTGTTTCGGCA‑CCGAAAG‑CGCCGCGTCATCT‑GCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATA‑TTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTGGGGCTGGATATTAAACACCTCGACCTGGAGTCTGGTGAAGTGTGGGTTATGGGGAAAGGCAGCAAAGAGCGCCGC > NC_000913/3996351‑3996819
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
