Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F9 I0 R1 142 103.7 2603848 81.8% 2129947 227.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,065,579 T→A 14.8% T63S (ACC→TCC)  yihO ← putative sulphoquinovose importer

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,065,5790TA14.8% 206.4 / 4.9 101T63S (ACC→TCC) yihOputative sulphoquinovose importer
Reads supporting (aligned to +/- strand):  ref base T (67/14);  new base A (2/14);  total (73/28)
Fisher's exact test for biased strand distribution p-value = 1.22e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 102 total aligned reads displayed.

GATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGTGGATTATGGTCAGACATAATCACTCCTTATAACGCCCCGCAGGGCGTCGTTTATTATTATTACGCCGTG  >  NC_000913/4065343‑4065817
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                               
gttatagcacacATACGGACAGTTCAGCAGACTGGTGGAAAGGCAAAACACAAGAAACAGAGGGTGGGTAAACGTCGTTTGAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGAATTTAACGCTGCCGTAA‑CCACTGCATATAAAATAAAGGGAAGAAATTCGGCCTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTa                                                                                                                                                                                                                                                <  1:1051464/227‑1 (MQ=255)
    atcGCACCATACGAGCAGTTCATCAGACTGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATTTCGGTAAACC‑CGGTaaaaaa                                                                                                                                                                                                                                           >  2:283661/1‑239 (MQ=255)
           cATTCGAGCAGTTCATCAGACTGTAGTAAAGTCCAAACATCATAAACAGCTCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGcc                                                                                                                                                                                                                                    <  2:105878/239‑1 (MQ=255)
           cATACGAGCAGTTCATCAGACTGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTA‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGc                                                                                                                                                                                                                                     >  2:341927/1‑238 (MQ=255)
             tACGAGCAGTTCATCAGACTGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGccac                                                                                                                                                                                                                                  >  2:352303/1‑239 (MQ=255)
              gcgcgcggTTCATCAACCTGTTTGAAAGGCCAAACATCAAAACCAGCGCGGTGGCAATCGTCTTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGccacc                                                                                                                                                                                                                                 <  1:102514/232‑1 (MQ=255)
                gAGCAGTTCATCAGACTGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAg                                                                                                                                                                                                                               <  2:903452/239‑1 (MQ=255)
                     gTTCATCAGACTGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGGGTAAAAAT‑CCGGTG‑AGCTTAACGGTAAACG‑CGGTAAAAAAATTCCCCACCAGaaaaa                                                                                                                                                                                                                          >  1:853689/1‑237 (MQ=255)
                     gTTCATCAGACTGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGa                                                                                                                                                                                                                          >  2:102514/1‑239 (MQ=255)
                     gTTCATCAGACTGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCACCGGAA‑CAGCGGCAACTAAAATAAAGGGACGAAATTTGCATTTAGGCCCAATATTTT‑T‑CCGCGGGACGAGTAAAAAT‑CCGGTG‑AGCAAAACGGGTAACG‑CGGTTAAAAACATCGCCAACAaaaaaa                                                                                                                                                                                                                          >  1:198133/1‑237 (MQ=255)
                        catcaGACTGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑a                                                                                                                                                                                                                       >  2:979634/1‑238 (MQ=255)
                        catcaGACTGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑a                                                                                                                                                                                                                       >  2:978606/1‑238 (MQ=255)
                        catcaGACTGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTAAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑a                                                                                                                                                                                                                       >  2:616001/1‑238 (MQ=255)
                           caGACTGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATc                                                                                                                                                                                                                    >  2:518374/1‑238 (MQ=255)
                           caGACTGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGGTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCCTATAAAATAAAGGGACGAAATTTGCCTTTAGGCACAATATTTT‑T‑ACGCGAGTCGAGTAAAAAA‑CAGGTG‑AGCATACCGGTAAACG‑CGGTAAAAAAATGCGACACCAGAAAGaa‑aacc                                                                                                                                                                                                                    >  1:361018/1‑236 (MQ=255)
                                tGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCa                                                                                                                                                                                                              >  2:148813/1‑239 (MQ=255)
                                tGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAAATTCGCCACCAGCAAGAT‑AATCCCGCCa                                                                                                                                                                                                              >  2:710119/1‑239 (MQ=255)
                                tGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAACATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGGG‑AGCATATCGGTAAACG‑CGGGAAAAAACTTGTCCACACGAAAGAA‑AATCCCGCCa                                                                                                                                                                                                              >  1:225152/1‑239 (MQ=255)
                                tGTATGAAAGTCCAAACATCATAAACAGCGCCGTGGAAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACAAAAATTGCCTTTAGGCCCAATATTTT‑T‑TACCAAGTCGAGTAAAAAT‑CAGGCG‑AGCATACCGGTAAAAT‑CGGCAAAAAACTTCGCCACCAGAAAGAA‑AATCCCGCCa                                                                                                                                                                                                              >  1:626595/1‑239 (MQ=255)
                                  tATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCAACCAGAAAGAT‑AATCCCGCCATa                                                                                                                                                                                                            >  2:1018001/1‑239 (MQ=255)
                                   aTGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGGGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCGGAAAGAT‑AAACCCGCCATAg                                                                                                                                                                                                           >  2:941898/1‑239 (MQ=255)
                                        aGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑CTAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAAATTCGCAACCAGAAAGAT‑AATCCCGCCTTAGTagcc                                                                                                                                                                                                      >  2:112242/1‑236 (MQ=255)
                                          tCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCa                                                                                                                                                                                                     >  2:452165/1‑238 (MQ=255)
                                          tCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAg                                                                                                                                                                                                    >  2:55382/1‑239 (MQ=255)
                                          tCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑ACGGTG‑AGCATACCGTTAAACC‑CGGTAAAAAACTTCACCACCAAAAAGAA‑AAACCCCCCaaaaaaaaaag                                                                                                                                                                                                    >  1:837019/1‑229 (MQ=255)
                                            cAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGATTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAAAG‑CGGGAAAAAACTTCGCAACCAGAAAGAA‑AATCCCGCCAAAGaaaaaaagg                                                                                                                                                                                                  >  1:846173/1‑233 (MQ=255)
                                            cAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAGAT‑CCGGTG‑AGCATATCGGAAAACG‑CGGTAAAAAAATTCGCCACCAGAAAGAA‑AATCCCGCCATAGGAAACAGGc                                                                                                                                                                                                  >  2:598395/1‑239 (MQ=255)
                                            cAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGc                                                                                                                                                                                                  >  2:922083/1‑239 (MQ=255)
                                            cAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGAAAACG‑CGGAAAAAAACTTTGCCACCAGAAGGAT‑AATCCCGCCATAGTAAGCAGGc                                                                                                                                                                                                  >  2:721744/1‑239 (MQ=255)
                                            cAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTA‑AGCATATCGGTAAACG‑CGGTAAAAACCTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGc                                                                                                                                                                                                  >  2:9148/1‑239 (MQ=255)
                                            cAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGGG‑AGAATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCCGCAAGAT‑AATCCCGCCATCGAAAGCAgg                                                                                                                                                                                                   >  2:319770/1‑238 (MQ=255)
                                            cAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCAGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCAAATCGGCAAACG‑CGGGAAAAAACTACGCCACCCAAAAGAG‑AATccaacaaaaaaaagaagga                                                                                                                                                                                                  >  1:1086048/1‑222 (MQ=255)
                                                    atAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCTCTGCATATAAAATAAAGGGACGAAATTTGACTTTAGGCCCCATATTTT‑T‑CCGAGAGACGAGTAAAAAT‑CCGTTG‑TGCCAATAGGTAACCC‑TGGTAAAAACCTTCGCAACCAGACAAAA‑AACCCCCCCAAATAAAACAGGCATACCaaa                                                                                                                                                                                          >  1:1204148/1‑239 (MQ=255)
                                                    atAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑GGGTAAAAAAATTCGCCACACGAAGGAT‑AATCCCGCCATAGTAACCAGGCATCCCt                                                                                                                                                                                            >  2:408583/1‑237 (MQ=255)
                                                    atAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTaa                                                                                                                                                                                          >  2:667635/1‑239 (MQ=255)
                                                      aaaCAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGAAAAAAACTTTGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCAAAtc                                                                                                                                                                                        >  2:291777/1‑238 (MQ=255)
                                                          ggccgggtcactaggtttgtTTTCACCGACAAAAAAAAGGGGGTCGAA‑AAAAACGGGGGCTTTCAAATATCCCCCGCGGAAA‑CCGCTTAATAAAAAAAAAAGGGAAAAATGTTGCCTTTAGCCCAAATATTTC‑T‑CCGCGATGCGATTAAAACA‑CCGGTG‑AGCATTCCGGTAAACG‑AGGTAAAAACCTCCGCCACAAGAAAAAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATc                                                                                                                                                                                    <  1:452165/221‑1 (MQ=255)
                                                           gcgcGGTGGCAATCGTCGTTTTAACCGGCCAACAAAAGGTGGAGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGc                                                                                                                                                                                                                                     >  1:981162/1‑190 (MQ=255)
                                                           gcgcGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCCGAAAGAT‑AATCCCGCCATATTAAGCAGGCATCACTAATTCATCg                                                                                                                                                                                   >  2:865917/1‑239 (MQ=255)
                                                           gcgcGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAg                                                                                                                                                                                                                           >  2:89233/1‑200 (MQ=255)
                                                           gcgcGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGAAACCAGGCATCCCTAATTcctg                                                                                                                                                                                    >  2:311397/1‑235 (MQ=255)
                                                            cgcgGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTaaaa                                                                                                                                                                                                                                             >  2:263138/1‑181 (MQ=255)
                                                            cgcgGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCgg                                                                                                                                                                                  >  2:811831/1‑239 (MQ=255)
                                                            cgcgGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCgg                                                                                                                                                                                  >  2:261733/1‑239 (MQ=255)
                                                             gcgGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAAtt                                                                                                                                                                                        >  2:904744/1‑232 (MQ=255)
                                                               ggTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGtat                                                                                                                                                                               >  2:585503/1‑239 (MQ=255)
                                                                 tggtcagttgttgtttAACCCGAAAAAAAGAAGGGGTGGAGAAAAAACTGGAGCAGTACAATGAACGCTGAGGGAC‑CCGTTGAATAAAAAAAAAAGGGACAAATTTCGCTTTTAGGCCTAATTTTTT‑C‑CCGCGAGTCGAGAAAAAAC‑CGGGAG‑ATCATCTCGGAAAACG‑CGGAAAAAATCTCCGCCACCAGAAAAAA‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGtat                                                                                                                                                                               <  1:746146/225‑1 (MQ=255)
                                                                         gtcgtTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCTCGAGTAGGGTAAAAAT‑CAGGTG‑CGCATATCGGTAAACG‑GGGTAAAAACCTTCGCAACCAGAAAGAG‑AATCCCGCCATATGAAGCAGCAAACCTAAATTAATAGGTAAAAAATTTgag                                                                                                                                                                     >  1:261854/1‑239 (MQ=255)
                                                                           cgtTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTgagga                                                                                                                                                                   >  2:277425/1‑239 (MQ=255)
                                                                                     ggCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAACGAGGCACCCCTAATTCATAGGGAAAAAAATTtagaaaaaaaaaaga                                                                                                                                                         >  1:713553/1‑227 (MQ=255)
                                                                                              aaGGTGGGGGAG‑AAAAACGGGAGTGTTGCAATTAACCCCCCCGGAA‑CCGCTGAATATAAAATAAAGGGACAAAATTTGCCTTTAGCCCCAATATTTT‑C‑CCGCGAGTCGAGTAAAAAC‑CCGGTG‑AGCATATCGGAAAACG‑CGTTAAAAACCTTCGCCACCAGAAAGAT‑AACCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCa                                                                                                                                                <  2:1086048/239‑1 (MQ=255)
                                                                                               tggtggtGGAT‑ATAAAGTGGGGTTTTTCATTTCACCCCGCCGGAC‑CCTGTGAAAAAAAGAAAAAGGGACAAAATTTGCTTTTGGCCCAAATATTTT‑T‑CCGCTGGTGGAGAAAAAAC‑CGGGTG‑AGCATATCGATAAACG‑CGTAAAAAACCCCCGCCACAAAAAAAAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCag                                                                                                                                               <  1:667635/238‑1 (MQ=255)
                                                                                                 gtggtgGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAATG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGAATCCCTAATTCATCGGCAAAAAAGTTGAGGAGAAACAAAGTACCGATGCaaag                                                                                                                                             >  1:888658/1‑239 (MQ=255)
                                                                                                             aaaCTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGATTCGAGTAAAAAT‑CCGGTG‑AGCTTATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGAATAAAATTTGAGTAGATACAGAGAACCGATACacagactacaattca                                                                                                                                  >  1:760861/1‑228 (MQ=255)
                                                                                                                   gcggttgacAATTACCGCCGGCGGAC‑CCGTTG‑AAAAAAAATAAAAGGGCCAAATTTGGCCTTAGGGCCAATTTTTTCT‑CGGCGAGCTGTGAAAAAAC‑CCGGTG‑ACAATTGCGGTAAACG‑CGGAAAAAACCTGCACCACAGGAAAAAT‑AACCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCg                                                                                                                             <  1:922083/230‑1 (MQ=255)
                                                                                                                        ttGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTc                                                                                                                        >  2:521077/1‑238 (MQ=255)
                                                                                                                        ttGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCACAAAGAT‑AATCCCGCCATAGTAAGCAGGAATCCCTAATTCATCGGGATACAATTTGAGGAGATAAAGAGTAACGATACAGAGCATTAAATTCGAAcagcaggc                                                                                                                        >  1:555281/1‑231 (MQ=255)
                                                                                                                         tcctttttaccccgccgGAC‑CCTCTGAAATAAAAAAAAAAGGAAAAAATCTGCCTTGAGGCACAATTTGTT‑T‑CCGCGAGTAGAGAAAAAAC‑CCGGAG‑GGCATACCGGTAAACG‑AGGTAAAAACCCGCCCCACAAAAAAGAA‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGc                                                                                                                      <  1:710119/228‑1 (MQ=255)
                                                                                                                           caaatttacccgcccGAACCCGCTGAAAAAAAAAAAAAGTGACGACATGTGCCTTTAGGCCAAATTATTG‑C‑CCGCGAGTACAATAAAAAG‑CCGGTG‑AGCTTACCGGTAAACG‑CGGTAAAAAACTTCGCCACAAGAAAAAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGcc                                                                                                                     <  1:55382/230‑1 (MQ=255)
                                                                                                                             aTTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCcca                                                                                                                   >  2:834494/1‑238 (MQ=255)
                                                                                                                                aaCGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGGG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCCAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGACTTAAATTCGAACCGACGGCGCccataa                                                                                                                >  2:650847/1‑237 (MQ=255)
                                                                                                                                                      tataAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTc                                                                                                >  2:411483/1‑233 (MQ=255)
                                                                                                                                                         aaaaaaagGGGAAAAATTTTGCTTTTAGGCCAAATATTTT‑C‑CCGCGAGTGGAGTAAAACT‑CCGGTG‑AGCATATGGGAAAACG‑CGTAAAAAACCTTCGCCCCAAAAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGAtt                                                                                       <  2:837019/239‑1 (MQ=255)
                                                                                                                                                                aGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTGAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTACTTCATCGGCATAAAATTTGAGGAGATACAGGGTACCGCCGCAAACCATTAAATTCGAACCAGCGCCCCCCCACCAAAAAGCGATTTTTTccccacaaataaggtta                                                                                >  1:487036/1‑225 (MQ=255)
                                                                                                                                                                aGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGACACGACGCCGCCCATACCTAAGGGGATTTTTTccccaaggttacgtttt                                                                                >  1:1019316/1‑225 (MQ=255)
                                                                                                                                                                aGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGtttt                                                                                >  2:470634/1‑239 (MQ=255)
                                                                                                                                                                aGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGCACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGtttt                                                                                >  2:131707/1‑239 (MQ=255)
                                                                                                                                                                aGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGAATAAAATTTGAGTAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGACGATTCAGgttt                                                                                >  2:722927/1‑239 (MQ=255)
                                                                                                                                                                  ggccGAAATTTCCCTTGAGGCCCAATCTTTT‑C‑CCGGGAATCAAATAAAAAC‑CGGGTG‑AGCATACGGGAAACCG‑CGGTAAAAACCTTCACCACCAAAAAGAA‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGtttt                                                                                <  2:831254/234‑1 (MQ=255)
                                                                                                                                                                     cGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTCTAAAATTTGAGGAGATACAGAGTACCGATCCAGAGCATTAAATTCGCACCGACGTCGCCCATACCATAGGCGATTTTTTCCCCCAGCTTCAGTTTTAATGt                                                                           >  2:513184/1‑239 (MQ=255)
                                                                                                                                                                     cGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGt                                                                           >  2:363511/1‑239 (MQ=255)
                                                                                                                                                                     cGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACAGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCCCCGATTCAGTTTTAATGt                                                                           >  2:1262948/1‑239 (MQ=255)
                                                                                                                                                                     aaaaaaTTGTCTTTGGGGCCAATTTTTT‑TCCCGGGAGGCGAAAAAAACC‑CCGGGG‑AGCATAGCGATAAACG‑CGGAAAAAAACTTCGCCACAAAAAAGAA‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAAt                                                                             <  2:853689/236‑1 (MQ=255)
                                                                                                                                                                             gCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAACAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATCAAATTTATGGAGATAACAAGTACCGATGCAGAGCATTAAATTGGAGCAGAGGTAGCCCAAACCACAGAGGATTTTTTTCCGCGGAATCATTTTTTATGTTAGTggca                                                                   >  1:43970/1‑237 (MQ=255)
                                                                                                                                                                             gCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAACGTCACGGGAt                                                                   >  2:524240/1‑239 (MQ=255)
                                                                                                                                                                                  tAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCAACGCCGCCCATACCTAAGGCGGTTTTTTCCCCCAAATTAAATTTTAATGTCAGTGGATTAAgg                                                              >  1:519614/1‑239 (MQ=255)
                                                                                                                                                                                   gtgcctattttttt‑t‑CCGAGCGTCGATAAAACAC‑CCGGTG‑GCAATAT‑GGAAAAAG‑CAGTAAAAAAATTTCCCCCAAAAGAAATAAATCCCGCCATAGTAAGCAGTCATCCCTAATTCATCGGTATAAAATGTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGTGGATTATGGt                                                             <  1:979634/229‑1 (MQ=255)
                                                                                                                                                                                   gggCCCAATTTTTT‑C‑CCGGGAGGCGGAAAAAAAC‑CCGGTG‑AGCATAGGGGTAAACG‑GGGAAAAAATCTGCCCCACAAAAAAGAA‑AACCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGTGGATTATGGt                                                             <  2:846364/238‑1 (MQ=255)
                                                                                                                                                                                   agcccaaaTTTTTT‑C‑CCGCGATTCGAAAAAAACC‑CGGGTA‑AGAAAATCGGTAAACG‑CGGTAAAAATCTCCGCCACCAGAAAAAT‑ACTCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGTGGATTATGGt                                                             <  2:626595/233‑1 (MQ=255)
                                                                                                                                                                                    ggCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGCCAGTGGATTATGGTc                                                            >  2:531357/1‑239 (MQ=255)
                                                                                                                                                                                    gaccaaaTTTTTT‑T‑CCGCGGGGCGAGTAAAAAT‑CGGGTA‑AGCATAGGGATAAGCG‑GGGAAAAAAATGGCAACACAAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGTGGATTATGGt                                                             <  2:589438/233‑1 (MQ=255)
                                                                                                                                                                                    cagcacatttttcgt‑CCGAGAGTTTAATAAAGAG‑CGGGGG‑AGTATAGCGGTAAACG‑CGAAAAAAACCTTCCCCCACAAAAAGAA‑AATCCCGCCATAGTAAGCAGGCATTCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGTGGATTATGGt                                                             <  1:148813/225‑1 (MQ=255)
                                                                                                                                                                                       cacatttttt‑c‑CCGGGAGTAGAATAAAAAC‑CCGGGG‑AGCATCGCGG‑AAACGTAGATAAAAAACTTCCCAACCAAAAAAAA‑AACCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGTGGATTATGGTCAGa                                                         <  2:1248463/233‑1 (MQ=255)
                                                                                                                                                                                          catatttttgcccgaaggacagtAAAAATCCCGGTC‑AACATCCGGGTAACCG‑GGGAAAAAACCTTCCCCCACAAAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGTGGATTATGGTCAGa                                                         <  2:555281/219‑1 (MQ=255)
                                                                                                                                                                                          atatTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGAATCCCTAATTCATCGGAATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTAGCCCATACAAAAGGCGATTTTTTCCCCCAAATTAAATTTTAATGTCAGTGGATTAAGGtaaaaaaa                                                      >  1:622078/1‑232 (MQ=255)
                                                                                                                                                                                               gt‑t‑CCGCGAGACGGATAAAACT‑CCGGTG‑AGAATTTCGGAAAACG‑GGGAAAAAAACTCCCCCCCCAAAAAGAT‑AACCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGTGGATTATGGTCAGACATAATCa                                                 <  2:1019316/238‑1 (MQ=255)
                                                                                                                                                                                                t‑t‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGCCGTTGCCCATACCATAGGGGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGAGGATTTGAGTCAGACATAATCa                                                 >  2:581406/1‑238 (MQ=255)
                                                                                                                                                                                                 ttcccGGGAGGCGATTAAAAAC‑CCGGTG‑AAAATTGCGGAAAACG‑CGTAAAAAACCTTCGCCACCAAAAAGAA‑AACCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGTGGATTATGGTCAGACATAATCa                                                 <  2:888658/236‑1 (MQ=255)
                                                                                                                                                                                                       cgagtcgagtAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGTGGATTATGGTCAGACATAATCACTCCtt                                           >  2:808970/1‑239 (MQ=255)
                                                                                                                                                                                                       cgagtcgagtAAAAAT‑CCGGAG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGAAGAGCATTAAATTCGAACCGACGTCACCCATACCATAGGCGATTTTTTCCACCCGGTTCCGTTTTACATTAAGGGGATTAATGTCAGACATCATCACTCCtt                                           >  1:783654/1‑239 (MQ=255)
                                                                                                                                                                                                              agtAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGTGGATTATGGTCAGACATAATCACTCCTTATAACg                                     >  2:817149/1‑238 (MQ=255)
                                                                                                                                                                                                              aatAAAAAC‑CCGGTG‑AGTATAGCGGAAAACG‑GGAAAAAAACCTTCCCCACAAAAAATAT‑AACCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGTGGATTATGGTCAGACATAATCACTCCTTATAACg                                     <  2:760861/236‑1 (MQ=255)
                                                                                                                                                                                                               attaaaaT‑CCGGGGTAGAATGTCGGAAACCG‑CGGAAAAAACCTTCCCCACAAAAAAGAT‑AACCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGTGGATTATGGTCAGACATAATCACTCCTTATAACg                                     <  2:846173/235‑1 (MQ=255)
                                                                                                                                                                                                                                gCATAGCGGTAAGCG‑CGTAAAAAACCTTCCCCAACAAAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGTGGATTATGGTCAGACATAATCACTCCTTATAACGCCCCGCAGGGcgtcgt                     <  2:951204/238‑1 (MQ=255)
                                                                                                                                                                                                                                 cATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGGGGATTATGGTCAGACATAATCACTCCTTATAACGCCCCGCAGGGCGTCGttt                   >  2:717117/1‑239 (MQ=255)
                                                                                                                                                                                                                                   tctgggaaaaCG‑GGGTAAAAACCTTCCCCACCAGAAAAAA‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGTGGATTATGGTCAGACATAATCACTCCTTATAACGCCCCGCAGGGCGTCGTttat                 <  2:198133/232‑1 (MQ=255)
                                                                                                                                                                                                                                   tatCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATACTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCACGGGATTATGGTACGACATAATCCCTCCTTATAACGCCCCGCAGGGCGTCGttttt                 >  1:109180/1‑237 (MQ=255)
                                                                                                                                                                                                                                         tAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGTGGATTATGGTCAGACATAATCACTCCTTATAACGCCCCGCAGGGCGTCGTttattattat           >  2:111583/1‑239 (MQ=255)
                                                                                                                                                                                                                                           aaCG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGCTTTTTTCCCGCAGACTCAGTTTTAATTTCAGTGGCTTTGGGTCAGACATAACCCCTCCTTCTAACCCCCCCCAGGAGCTCGTttttttttatt          >  1:705927/1‑238 (MQ=255)
                                                                                                                                                                                                                                                   tAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGGTTCAGTTTTAATGTCAGTGGATTATGGTCAGACATAATCACTCCTTATAACGCCCCCCAGGGCGTCGTTTATTTTTATTAcccccgg  >  1:913996/1‑236 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                               
GATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCG‑ATAAACTGGAGCGTTGCAATTAACGCCGCCGGAA‑CCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTTAGGCCCAATATTTT‑T‑CCGCGAGTCGAGTAAAAAT‑CCGGTG‑AGCATATCGGTAAACG‑CGGTAAAAAACTTCGCCACCAGAAAGAT‑AATCCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAGTGGATTATGGTCAGACATAATCACTCCTTATAACGCCCCGCAGGGCGTCGTTTATTATTATTACGCCGTG  >  NC_000913/4065343‑4065817

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A