Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F27 I0 R1
|
120 |
139.6 |
2835800 |
98.5% |
2793263 |
226.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,852,507 |
T→G |
10.6% |
T93P (ACC→CCC) |
ilvB ← |
acetolactate synthase 2 large subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,852,507 | 0 | T | G | 10.6%
| 421.0
/ 2.1
| 155 | T93P (ACC→CCC) | ilvB | acetolactate synthase 2 large subunit |
| Reads supporting (aligned to +/- strand): ref base T (44/82); new base G (25/2); total (71/84) |
| Fisher's exact test for biased strand distribution p-value = 2.91e-08 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 158 total aligned reads displayed.
AGGAATGTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGTTCCA‑GGAAATGAACGATAAATTCTGCG > NC_000913/3852271‑3852739
|
aGGAATGTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCa < 1:459418/239‑1 (MQ=255)
aagtgcTATCCACACCGTGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCAc < 2:414409/232‑1 (MQ=255)
aaTGTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCAc < 1:1229563/237‑1 (MQ=255)
gTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGTACCTGA‑CCCGTGATTCAAATCAGCGGGATGGCGTCCAGCCGCCCCTCGGCGATGGCGGGTAACCAgg > 2:176861/1‑239 (MQ=255)
gTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGGACCTGA‑CCCGGGATGCAAATCAGCGGGATGGGGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAggg > 1:11521/1‑238 (MQ=255)
gTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGGACCTGA‑CCCATGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAAAGGC‑GGGCCCCCGG‑t > 2:400583/1‑239 (MQ=255)
gTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGCACCTGA‑CCAGTGATGCCAATCCACGGGCTGGGGTGCAGGCGAGCATCGGCAATGGC‑GGGCACCAg > 2:1075238/1‑237 (MQ=255)
gTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGCACCTGA‑CCAGTGATGCACATCAGCGGGCTGGAGTCCAGCCGCGCATCTGCCATGGC‑GGTcccctgag > 1:129167/1‑235 (MQ=255)
gTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCCGTGATGCAAATCAGCGGGGTGGGGGCCAGCCGCGCATCGGCCATGGC‑GGTCAcccagg > 2:94423/1‑235 (MQ=255)
gTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCCAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑t > 1:1232781/1‑239 (MQ=255)
gTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGGTGGAGTCCAGCCGCGCATCGGCAATGGC‑GGGCACCAggg > 2:914455/1‑238 (MQ=255)
gTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGGGTCCAGCCGCGCATCGGCAATGGC‑GGGTACCAggg > 1:1311941/1‑238 (MQ=255)
gTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑t > 1:1205673/1‑239 (MQ=255)
gTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑t > 1:1140443/1‑239 (MQ=255)
gTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑t < 1:442687/239‑1 (MQ=255)
gTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑t < 2:573766/239‑1 (MQ=255)
gTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGGGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCCTCGGCACAGGC‑GGGGACCAggg > 1:34200/1‑238 (MQ=255)
gTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCACTGAGGCAAATTAACGGGGTGGAGTCCAGCCGCGCACCGGCCATGGA‑GGtacaccggg > 2:21298/1‑231 (MQ=255)
gTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGCAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGGGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCCggg > 1:544289/1‑238 (MQ=255)
tCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGGTGGAGGCCAGCCGCGCATCGGCAAAGGC‑GGTCCCCCgggt > 1:229122/1‑237 (MQ=255)
tCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCCGA‑CCAGTGATGCAAATCAGCGGGGTGGGGTCCAAGCGCGCATCGGCAAAGGC‑GGGCAccccggt > 2:710156/1‑234 (MQ=255)
tATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGGAAATCAGCGGGATGGGGTCCAGCCGCGCATCGGCAATGGC‑GGGCACCCGG‑GTAg > 2:1352553/1‑239 (MQ=255)
ccACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAAGCTGA‑CCAGTGAGGCAAATCAGCGGGATGGGGTCCAGCCGCGCGTCGGCAATGGC‑GGTCACCAggggagtg > 2:1274795/1‑232 (MQ=255)
acCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCAcc < 1:878857/239‑1 (MQ=255)
acCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCAcc < 2:626279/239‑1 (MQ=255)
ccGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCAcc > 1:81044/1‑238 (MQ=255)
cGGGCCTGGGCGGCCTGAGTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCg < 1:710156/239‑1 (MQ=255)
gCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGG‑CCAGTGATGCCAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGGCACCACG‑GTAG‑TAGCGccccgg > 2:264954/1‑235 (MQ=255)
gCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGt < 1:16871/238‑1 (MQ=255)
gCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGt < 1:1352553/238‑1 (MQ=255)
cggcCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTAc < 1:1288662/238‑1 (MQ=255)
cggcCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTAc < 2:1396280/238‑1 (MQ=255)
aaTGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GAccg < 2:215954/239‑1 (MQ=255)
tGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGGCACCCGG‑GTAA‑TCGCACCCCGTCCGCCACAGG‑CCATAccggacgcc > 2:1098117/1‑231 (MQ=255)
cATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GAc < 1:434224/226‑1 (MQ=255)
aTCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGGGTCCAGCCGCGCAACGGCAATGGC‑GGTGACACGG‑GTAGCGCGCCCCCGG‑CCGCCACAGGCCCATCCG‑GACCCCCGGTTTAcc > 2:1214848/1‑238 (MQ=255)
aTCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCCTCGGCAATGGC‑GGGCACCAGG‑GTAG‑TCGCCCCCGGTCCGCTACAGG‑CCCTaa > 2:367249/1‑220 (MQ=255)
aTCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTTACCAGG‑TTAG‑GCGCACCCGGGCCGCTACAGG‑CCATAAA‑GACCCCCGGGTTACCGt > 1:17877/1‑239 (MQ=255)
cGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCCGTGATGGAAATCAGCGGGGTGGGGGCCAGCCGCGCATCGGCAATGGC‑GGTCACCCAG‑GTGG‑TCGCACCCGGGCCGCCACACG‑CCCAACA‑AGCCGCCgggtgtccggcg > 2:1059146/1‑229 (MQ=255)
cATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTgc < 2:1378643/239‑1 (MQ=255)
gACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGGTGGAGTCCCGCCGCGCATCGGCAATGGC‑GGGCACCAGG‑GTAG‑TGGCACCCGGGCCGCCACAGG‑CCCTACA‑GACGGCCGGGTTTCAGGTGGTgcgc > 2:657377/1‑238 (MQ=255)
gCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGGTGGAGTCCAGCCGCGCCTCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGGACCCGGGCCGCCACAGG‑CCCTACA‑GACCCCCGGTTTACCGCCGGTgccggcccc > 2:1306757/1‑231 (MQ=255)
ggAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTcc < 2:1099363/238‑1 (MQ=255)
aGTTCTGCGATATGTCGGACCAGATGGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCt < 2:129167/238‑1 (MQ=255)
ttcttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGa < 2:170280/238‑1 (MQ=255)
tcttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGa < 1:1289026/237‑1 (MQ=255)
cttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCCGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑GTAG‑GCGCACCCCGGCCGCTACAGG‑CCATACA‑GACCCCCGGGTTACCCTCCGGGCGGG‑CCATTcccccggag > 2:1175059/1‑233 (MQ=255)
atGTCTGACCAGATAGTTGTGTTTGGGGATGGGGATAGAGATGCTGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGc < 1:249404/239‑1 (MQ=255)
gTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGccc < 1:256673/239‑1 (MQ=255)
gTCTGACCAGATAGTTGCGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCg < 1:409308/171‑1 (MQ=255)
ccAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGcc < 2:80265/238‑1 (MQ=255)
aTAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGGCACCAGG‑GTAG‑TCGCACCCGGTCCGCTACCGG‑CCATACA‑GACCGCCGGGTTAACGTCGGGGCGCG‑CCATTCCCTGAGCGGTAAAACCCGCGccccgg > 1:389070/1‑235 (MQ=255)
aTAGTTGCGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGGAAATCAGCGGGATGGAGTCCAGCCGCGCCTCGGCAATGGC‑GGTCAACAGG‑GTAG‑TCGCACCCGGGCCGCTCCa > 2:409308/1‑171 (MQ=255)
tggttttggggaaTGGGAATGGAGAGCCCGAAGGTGCCACCTCCCGGGAAGGGGCCGGGGCGAACCACCGGGGC‑GGAACCTGACCCATGGAGCCAAATCGGCGGGA‑GGAAGCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGa < 2:115559/227‑1 (MQ=255)
tgggtTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGa < 1:973266/236‑1 (MQ=255)
ttGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACggg < 2:593173/238‑1 (MQ=255)
tGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGGTGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑GTAG‑TCGCACCCGGTCCGCTACAGG‑CCAAACA‑GACCGCCGGGTTTCCGGCGGGGCGCG‑CCATTCCCTGAGCGCTAAAACCCGCGCCCTGTTCATGAGGGGCCAGa > 1:316863/1‑239 (MQ=255)
tGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAg < 2:874957/238‑1 (MQ=255)
tGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAata < 1:1175059/239‑1 (MQ=255)
ggATGGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGACCCTGG‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCCCCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATg < 1:1402375/238‑1 (MQ=255)
ggATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATg < 2:1140443/238‑1 (MQ=255)
agagATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGa < 2:1222036/239‑1 (MQ=255)
gCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGGGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGGCCACCGG‑GTAG‑TGGCAACCGGTCCGCTACAGG‑CCATACA‑GACCGCCCGGTTTCCGTCGGGGGGCGCCCATTCCCT‑AGCGGAAAAACCCGCGCCCCGTTTCTGACGGGcccggaatagcgggggttttg > 2:698659/1‑220 (MQ=255)
ccGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGGCCCCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGGGCGCG‑CCCTTCCCTGCGCGATAAAACCCGCGCCCCGTTCATTACGGGCCAGAATATGGCGGGTTTTCgg > 1:768670/1‑238 (MQ=255)
ccGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑ACAGTGATGCAAATCAGGGGGATGGAGTCCAGGCGCGCATCGGCAAAGGC‑GGGCACCCGG‑GTTG‑TCGGACCCGGGCCGCTACAAG‑CCCTACC‑GACCGCCCGCTTAACGTCGGTGCGCC‑CCCTTCCCTCGGCGATAAAAGCCGCCCCCCGGTCATGACCGGCCAggaaaagggcggtgtggtg > 2:279295/1‑221 (MQ=255)
aGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑tt < 1:21298/239‑1 (MQ=255)
aGGTGTCCACTTCCGGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGGGGGACGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑tt < 2:1214651/239‑1 (MQ=255)
ggTGGCCACTGCCTGGAAGGCGTCGGTGCCGATCATCGGGGCGGGAACCGGA‑CCAGTGATGCAAAGCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TGAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑tt < 1:51811/238‑1 (MQ=255)
tCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGGACCTGA‑CCAGTGGAGCAAATCAGCGGGGTGGAGTCCAGCCGCGCATCGGCAATGGC‑GGGCACCAGG‑GTAG‑TAGGACCCGGCCCGCCACAGG‑CCATAAA‑CGCCGCCGGGTTTCCCGCGGTGCGCG‑CCACTCCCTGGGCGATAAAAACCCCGCCCCCTTCACGACGGGCCCCCATATGGCgcggttccggcggtctg > 2:490196/1‑221 (MQ=255)
tCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑GTAG‑TCGCACCCCGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCCTCGGTGCGCG‑CCATTCCCTGAGCGATAAAACCCCCGCCCTGTTCATGACGGGCCCGGATATGGCGGGGTTGTGTGC‑TTTTGCt > 2:1121061/1‑239 (MQ=255)
cTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAg < 2:325600/239‑1 (MQ=255)
ttCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGGACCTGA‑CCAGTGATGCAAATCAGCGGGAGGGGGGCCAGCCGCGCTTCGGCAATGGC‑GGTGACCCGG‑GTAG‑TCGCCCCCCGGCCGCTCAAGG‑CCA‑ACACGACAGCCGGGTTACCCTAGGGGCGCG‑CCATTCCCCGAGGGCTAAAAACCCGGCCCCTTTCACGCCGGGCCAGAACATGGCgggtcttcggggctttgggtatgg > 2:961820/1‑217 (MQ=255)
cGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAAcagg < 1:686303/238‑1 (MQ=255)
cGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAAcagg < 1:914455/238‑1 (MQ=255)
cGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAAcagg < 2:1223113/238‑1 (MQ=255)
cGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TGAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAAcagg < 2:236850/238‑1 (MQ=255)
aCCTGA‑CCAGGGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCGTCGGAAATGGC‑GGTCACCAGT‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAACAGGCAGGATAGAACCGCCCGGAATGc < 2:1386249/238‑1 (MQ=255)
tGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTCG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGt < 1:1075238/239‑1 (MQ=255)
ccAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTcac < 1:1121061/239‑1 (MQ=255)
ccAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTca < 1:94423/238‑1 (MQ=255)
ccAGTGATGCAAAGCAGCGGGATGGAGTCGAGGCGCGCATCGGGAATGGC‑GGTCACCAGG‑TTAG‑TCGCGCTCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTca < 1:311460/238‑1 (MQ=255)
cAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTcaca < 1:965053/239‑1 (MQ=255)
cAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTcac < 1:1216960/238‑1 (MQ=255)
tGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTTCGGGC‑TTTGGCTTAAGGCAT‑CGTTAAAAGGCCGGATAGAACCGCCCGGGATGCCTGTCACaa > 1:1007792/1‑237 (MQ=255)
cAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAAt > 1:333859/1‑239 (MQ=255)
cAGCGGGATGGAGTCCGGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGGGC‑CTTGGCTTAAAGCATCCGAAACCAGCCGGGAGAAAACCCCCCGGaagccctctccaatttttattccc > 2:1190248/1‑216 (MQ=255)
gggATGGAGTCCGGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTGGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCctg < 2:185516/236‑1 (MQ=255)
gggATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCctg < 1:1098117/236‑1 (MQ=255)
gggATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCctg < 2:229122/236‑1 (MQ=255)
gggATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCctg < 1:1306757/236‑1 (MQ=255)
ggatgggtcgcAGCCGCACAACGTCAACGGC‑‑GTCCCCGGGTTTGG‑TCGGACCCGGTCCCCTGTAGG‑CCGTCCG‑ATCAGCCGGTTTCCCGGCGGTGCGCG‑CCATGCCCTGAGCGATAAAGCCAGCGCCCTGTTCATGCCGGGCCATAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGGAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCctgctg < 2:837058/228‑1 (MQ=255)
tGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGa > 1:370886/1‑134 (MQ=255)
aGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTTGCGTTAGGGAT‑CGCAAACAGGCAGGATAGAAACGCCCCGGAAACCCGGCACAAACTTTATGACCCGCTGGTCCC‑gg > 2:1059222/1‑239 (MQ=255)
ccAGCCGCGCATCGGCAGTGGC‑GGGCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGTTCCA‑GGaa < 1:180408/238‑1 (MQ=255)
cAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGTTCCA‑GGAAAt < 2:34200/239‑1 (MQ=255)
aGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGGTTTTCGGGG‑CTTTGCTTTAGGCAT‑CGGAAAAAGGCAGGGGAGAAACCCCCGGGATGGCTGTCACAATCTTAATACCCTGCTGTTCCACGGAAAt > 2:441653/1‑239 (MQ=255)
aGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTTCGTGC‑TTTTGGTTAAGGCCA‑CGTAAAAAAGCAAGGTAAAAACGCCAGGGAAGGCTTTTCCCATCTTAATACCCTCTTGtttcccgaaaag > 2:1240525/1‑229 (MQ=255)
aGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGAGTTTTGGGCTTTTGGCTTAA‑GCAT‑CGGTAAAAAGAGGGGTGGAAACCCCCGGGACGCCCTGCACAATATTTATAGCCTGGTGTTCCA‑GGaaaag > 2:541502/1‑237 (MQ=255)
tCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGcc < 1:261822/94‑1 (MQ=255)
tCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGcc > 2:261822/1‑94 (MQ=255)
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AGGAATGTCTATCCACACCGGGCCTGGGCGGCCTGATTGCGCAATGCGGAAGGCATCGCTCATGACCTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGA‑CCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGC‑GGTCACCAGG‑TTAG‑TCGCACCCGGTCCGCTACAGG‑CCATACA‑GACCGCCGGTTTACCGTCGGTGCGCG‑CCATTCCCTGAGCGATAAAGCCCGCGCCCTGTTCATGACGGGCCAGAATATGGCGGATTTGCGTGC‑TTTGGCTTAAGGCAT‑CGTAAACAGGCAGGATAGAACCGCCCGGAATGCCTGTCACAATCTTAATGCCCTGCTGTTCCA‑GGAAATGAACGATAAATTCTGCG > NC_000913/3852271‑3852739
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
