Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F27 I0 R1
|
120 |
139.6 |
2835800 |
98.5% |
2793263 |
226.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,862,615 |
T→A |
9.7% |
pseudogene (988/1617 nt) |
glvC ← |
pseudogene, arbutin specific enzyme IIC component of PTS,enzyme, Transport of small molecules: Carbohydrates, organic acids, alcohols, PTS system, arbutin‑like IIB component, PTS system, arbutin‑like IIC component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,862,615 | 0 | T | A | 9.7%
| 334.5
/ 3.7
| 131 | pseudogene (988/1617 nt) | glvC | pseudogene, arbutin specific enzyme IIC component of PTS,enzyme, Transport of small molecules: Carbohydrates, organic acids, alcohols, PTS system, arbutin‑like IIB component, PTS system, arbutin‑like IIC component |
| Reads supporting (aligned to +/- strand): ref base T (65/47); new base A (2/11); total (71/60) |
| Fisher's exact test for biased strand distribution p-value = 6.14e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
Only 100 of 131 total aligned reads displayed.
ATCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGTTGCGGGAATCAG‑CAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑CGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACAT > NC_000913/3862380‑3862849
|
aTCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACACACCAATGGCGATTTGGGGCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTa < 2:1133227/237‑1 (MQ=255)
aTCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTa < 2:1086031/237‑1 (MQ=255)
aTCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTa < 2:360019/237‑1 (MQ=255)
aTCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTa < 2:899664/237‑1 (MQ=255)
gtgCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑a > 1:971338/1‑238 (MQ=255)
gtgCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑Ag < 2:1368243/239‑1 (MQ=255)
gtgCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGGGAAATGAAAAG‑GAAGGTAAAT‑T‑CC‑a > 1:1033842/1‑238 (MQ=255)
gtgCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCAAGCACGGCGTGTACCGCAAAC‑CGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑a > 1:614651/1‑238 (MQ=255)
tgCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGc > 1:1173267/1‑239 (MQ=255)
cGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCgg > 1:976403/1‑239 (MQ=255)
cGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGGACCGCAAAC‑AGCAACGGGGAAATGAACAG‑GGAAGGAAAT‑T‑CC‑AGCgg > 1:1117058/1‑239 (MQ=255)
ggAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCgg < 2:536961/238‑1 (MQ=255)
cGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑t > 2:149081/1‑238 (MQ=255)
aCAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCccac < 1:624136/238‑1 (MQ=255)
cagGGTAAAGCACCACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGAACCGCAAAC‑AGCAACGGGGAAATGAACAG‑GCAGGTAAAT‑T‑CC‑AGCAGTT‑CGGGAA‑TTACCACCAG‑c > 1:1000412/1‑238 (MQ=255)
agGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑Ca < 1:222601/238‑1 (MQ=255)
ggTAAAGCCCAACCCAATGGCGATTTGGGTCAGCATCATAGCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATg < 1:205597/238‑1 (MQ=255)
gTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATg < 2:937714/237‑1 (MQ=255)
tAAAGCACGACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCGAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGAAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCACACCAG‑CATGGC‑g > 1:1360069/1‑239 (MQ=255)
tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑g > 2:1274187/1‑239 (MQ=255)
tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACAACAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCCG‑CATGGC‑g > 1:115332/1‑239 (MQ=255)
tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGCCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGCGATACAT‑TACGGCCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGGGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑g > 2:277568/1‑239 (MQ=255)
aGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑t‑t > 1:1264615/1‑239 (MQ=255)
caACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑gg < 2:457082/239‑1 (MQ=255)
caACCCAATGGCGATTTGGGGCAGCATCATATCCTGGTGGTTGGTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGATATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑gg < 2:1275547/239‑1 (MQ=255)
aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGGAATGAACAG‑GAAGGTAAAA‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑GA‑A‑ggg > 2:1117695/1‑238 (MQ=255)
aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGCGGG‑T‑TA‑A‑gt > 1:1039096/1‑238 (MQ=255)
aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑Ta‑aagg > 1:209102/1‑236 (MQ=255)
aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑G‑TA‑A‑ggg > 1:815081/1‑238 (MQ=255)
aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGGAA‑ATCCCACCAG‑CATGGC‑GG‑G‑Ta‑aagg > 1:638797/1‑236 (MQ=255)
cccAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGAAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑A‑Ta‑aagatg > 1:481073/1‑234 (MQ=255)
cccAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGGGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GAtt > 1:386196/1‑238 (MQ=255)
ccAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGTTGc < 1:225404/239‑1 (MQ=255)
ttgCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGTTGCGGGa < 2:852099/237‑1 (MQ=255)
tGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑Ca < 1:479811/219‑1 (MQ=255)
tGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑Ca > 2:479811/1‑219 (MQ=255)
tGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGTTGCGGGa < 2:914643/239‑1 (MQ=255)
tGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGTTGCGGGa < 1:1117695/239‑1 (MQ=255)
tGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGTTGCGGGa < 2:871400/239‑1 (MQ=255)
aTTTGGGTCAGCATCATATCCGCGTGGTTTCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGGGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGTGGCGGGacaac > 1:141252/1‑234 (MQ=255)
aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGGTGCGGGAATCa > 1:387823/1‑238 (MQ=255)
aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑GT‑A‑GGTTGCGGGaaata > 2:1253670/1‑235 (MQ=255)
cAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑AGGTGCGGGAAATAG‑CAAG‑ccc > 1:318034/1‑238 (MQ=255)
atatCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGGGAAATGAACAG‑AAAGGGAAAT‑T‑CC‑AGAGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TACA‑GGTT‑CGGGGATCAG‑CCAA‑GCCGCCAC‑ttt > 1:1412847/1‑239 (MQ=255)
cgcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCccac < 1:467643/189‑1 (MQ=255)
cgcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCccac > 2:467643/1‑189 (MQ=255)
gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAGAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑AGTTGCGGGGATCAA‑CAAG‑CCCGCCAC‑TTTTT‑ccc > 1:289763/1‑238 (MQ=255)
gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TT‑A‑AGTTGCGGGGAGCAG‑ACAA‑CCCGccccatcttccat > 2:750237/1‑228 (MQ=255)
gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑AGGTGTGGGGATCAG‑CAAA‑ACCCCCCC‑TTTTT‑ccc > 1:181023/1‑238 (MQ=255)
gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑G‑TT‑A‑GGTTGCGGGGAACAA‑CAAG‑CCCGCCCC‑tttttacc > 1:825566/1‑234 (MQ=255)
gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGGT‑CGGGAA‑TTCCCACCAG‑AATGGC‑GG‑G‑TA‑A‑AGTTGAGGGGATAAGCCAAG‑CAC‑CCAC‑tttttacc > 1:714003/1‑234 (MQ=255)
gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGGAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑AGGTGGGGGGATGAG‑CAAA‑CCCCCCCC‑TTTTT‑ccc > 1:1378929/1‑238 (MQ=255)
gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑G‑TA‑A‑GGTTGGGGGGATCAG‑CAAA‑CCCCCCCC‑CTTTT‑CCCCGtttt > 2:1089673/1‑239 (MQ=255)
gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAAAGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGTGGCGGGGATTAG‑GAAG‑ACCCCCCC‑tttttcaccgtttt > 2:55985/1‑229 (MQ=255)
cGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGGTGTGGGGATCAG‑CAAG‑CCCCGCACTTTTTA‑CCCG‑TTTTTCGGTGCGGGAg > 1:30464/1‑239 (MQ=255)
tCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑AGGTGTGGGAATCAG‑CAAGCCCCCCCCC‑TTTTC‑CCCCATTTTCCgggcgggcggggag > 2:1071264/1‑227 (MQ=255)
cggTTTTGCGAAAAAACCAAGACAAACAGACCCCCGCCCATGTCCCCCCCCCCCCCAAAGAAAACCAT‑TCGGGTCGACATGGAGG‑CCGCCAGCAGGGCGTGTCCCGCAAAA‑AGCAGGGGTGAAAGGAAGGG‑GAA‑GTAAAT‑TCCC‑GGGGGTT‑GGGTAA‑TCCCCACCAG‑CAGGGG‑GG‑T‑TA‑G‑GGTTGCGGAAATCAG‑CAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTa < 2:971338/237‑1 (MQ=255)
ttttGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑AGATGCGGGGAACAG‑CAAG‑CCCGCCAC‑CTTTT‑ACCGGTTTTTCGGGGCGGCAGGGAAGGACa > 1:857407/1‑238 (MQ=255)
cgaaaaaccacaagcAACCAGCCCCCCGCCTGTTTTCCCCCCCACA‑CAAAAAAAAACATATGCGGTCGACATGGACC‑CCGCCGGCACGGCGTGCCCCCCAAAC‑AACAGGGGTGAAATAAGCGG‑GAAGGAAAAG‑C‑CG‑GGCGTTT‑CGGTAA‑TCCCCCCCAG‑CTGGGG‑GG‑T‑GA‑G‑GGTGGCGGAAAGCAG‑CAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCt < 2:714003/224‑1 (MQ=255)
cGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGGTGCGGGGATAAG‑CAAG‑CCCCCCCC‑CTTTA‑CCCGATTTTTCGGGGCGGCCGTGGAGGACATCGCTa > 2:1130446/1‑239 (MQ=255)
cGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑G‑TA‑A‑GGGTGCGGGGAACAA‑CAAA‑CCCGCCACATTTTA‑CCC‑ACTTTTCGGTGTGGccggggtacacactccca > 2:1057897/1‑222 (MQ=255)
tactcacaccccccccctgtttccccaccccacAAAAAAAAAACAT‑TCGGGGGGTCAGTGATG‑CCGCCAGGACGCCGTGAACCGCAAAC‑AGACACGGTAAAAGTAGCAG‑GAAAGTAATT‑G‑CC‑GGCGTTT‑CGGTAG‑TCCCCCCCGG‑CATGGC‑GG‑T‑AA‑G‑GGTTGCGGAAATCAC‑CAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑Cg < 2:111443/216‑1 (MQ=255)
cccccGCCCATGTTCCCCACCACACAAAAGAAATACAT‑TAGGGTCAAAATGGAGG‑CCGCCAGCACGGCGTGGACCGCAAAC‑AGAAAGGGGGAAATGAACAG‑GAAGTAAAAT‑T‑CA‑GGCGGTT‑CGGTAT‑TCCCCACCAG‑CAGGGG‑GG‑T‑TA‑A‑GGTTGGGGGAATCAG‑CAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCaa < 1:149081/235‑1 (MQ=255)
tatttcccccACCACACAAAAGAGATACAT‑TACGGTCGATATGGAGC‑CGGCCAGCACGGCGTGTACCGCAAAC‑AGAAGAGGTGAAATAAACAG‑GAAGGAAATT‑T‑CC‑AGCGTTT‑CGTTAA‑TCCCCCCCAG‑CAGGGG‑GG‑T‑TA‑A‑GGTGGGGGGAACCAC‑AAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTg < 2:1412847/232‑1 (MQ=255)
cccacaccaAAGAGATACAT‑TGCGGCCGACATTGAGG‑CCGCCAGCACGGCGGGTACCGCAAAC‑AGCAACGGTGAAATGAAAAG‑GAAGTAAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TCCCCACCAG‑CAGGGC‑GG‑T‑TA‑G‑GGTTGGGGGAATCAG‑CAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTg < 1:503987/238‑1 (MQ=255)
accacaacaAAGATATACAT‑TGCGGGCGACATGGAGG‑CCGCCAGCACGGCGTGCACCCAAAAC‑AGCAACGGTAAAAAGAACGG‑GAAGGTAAAT‑T‑CC‑GGCGGTT‑CGGTAT‑TCCCCCCCAG‑CAGGGC‑GT‑T‑TA‑A‑GGTTGCGGGAATCAG‑CAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTg < 2:209102/239‑1 (MQ=255)
caccaAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GGTT‑TA‑A‑GGTGGGGGGAA‑CAG‑CCAG‑ACCGCCAC‑TTTTT‑CCCGGTTTTTCCGTGCGGCAGGGGAGTACAGTCCTCAAGAAAATCCCC‑CGGCA‑CCAA‑AAA‑atttttgggtaacggtccgg > 1:1034159/1‑224 (MQ=255)
caAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑G‑TA‑A‑GGGTGCGGGGATCAA‑CCAG‑CCCCCCAC‑TTTTA‑CCCCATTTTTCGGTGGGGGAGGGAAGGACAATGCTAAAAAAAACCCCC‑CCGCC‑CCAA‑AGA‑ATTTTTA‑Gtttacgcggcgggga > 2:1408157/1‑226 (MQ=255)
aTACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGt < 1:29924/93‑1 (MQ=255)
tcaaattacggtactctgtGAGG‑CCGCCGGCGCGGAGTGCCCCGCAAAC‑ATCAACGGTGAAATGAAGAG‑GAAGGTAACT‑G‑CC‑AGGTGTA‑CGATAA‑TCCCAACCAC‑GATGGC‑GG‑T‑AA‑A‑GGTGGCAAGAATCAG‑CAAG‑ACCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCTA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGc < 2:115332/221‑1 (MQ=255)
tACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGTTGGGGGAATCAG‑CAAG‑CCCGCCCC‑TTTTA‑ACCGATTTTCCGGTGCGGCAGGGGAGTAAAACGATAAAAAAAAGCCCA‑CCGCC‑CCAACAAG‑TTTTTTA‑G‑TACCATGCCGGGCAAAACCGc > 2:363447/1‑238 (MQ=255)
tACGGGCGACAATGGGGCCCGCAGGCACGGGGGGTACC‑CAAACAAGAACCGGAGAAATGAACAG‑GAAGGTAAAT‑T‑CA‑AGCTGTT‑CGTTAA‑TCCCCCCCAG‑CAGGGC‑GG‑T‑TA‑G‑GGTGGCGGAAACCAG‑CAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTcc < 2:691442/239‑1 (MQ=255)
gggTCGCAATTGGGC‑CCGCCAGCAGGGCGTGGACCGCAAAC‑AGAAACGGAGAAAAGAACAG‑GAGGCTAATG‑T‑CG‑GGCGGGT‑AGATAA‑GCCCCACCGG‑CAGGGC‑GG‑T‑GA‑C‑GTTGGGGGCAATGAG‑CAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCggg < 2:1378929/238‑1 (MQ=255)
cGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGGTTCGGGGGTCAG‑ACAG‑CCCCCCCC‑CTTTACCCCGTTTTTCCGG‑GCGGCCGGGGAGGAAATCCCGCAAAAAAATCCCA‑CCGCACCCAA‑ACA‑TTTTTTG‑GTTCCGTTGCGGGGC‑AAACCGCCCTCCcgg > 2:837355/1‑239 (MQ=255)
cGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑G‑TA‑A‑GGTTTCGGGGATCAG‑CAAA‑GCCGCCAC‑TTTTA‑CCCGATTTTTCCGTGCGGCAGTGAAAGAAAACCCCAAAAAAAAGCCCC‑CGGCA‑CCAA‑AGA‑ATTTTTA‑GTTAACGTGCAGGGCAAAAACCCCTTCCcgg > 1:1165811/1‑239 (MQ=255)
cGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑G‑TA‑A‑AGTTTCGGGAAACAG‑CCAA‑ACCGCCAC‑TTTTT‑CCCCGTTTTCCCGTGGGGCCGGGAAGTACACCGCTAAAAAAATGCCCA‑CCGGC‑CCAA‑AGA‑ATTTTTA‑GTTTACGTGCAGGGGAAAAACCCCtttccgg > 1:560183/1‑234 (MQ=255)
tCGACATTGAGG‑CCGCCAGCACGGCGTGGACCGCAAAC‑AGCAACGGCGAAATGAACAG‑GAAGGTAACT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGCGGG‑T‑TA‑G‑GCTTGC‑GGAACCAG‑CAAG‑CCCGCCCC‑TTTTT‑TCCCCTTTTTCCATGGGGGAGTGAAGTGCAACGCTAAACAAATGCCCC‑CCGCA‑CCCA‑AGA‑TTTTTTAGGTTCCGGTGACGGGC‑ACACCGCCCTCCggggcc > 2:990244/1‑236 (MQ=255)
gACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGGTTCGGGGATAAC‑CAAA‑CCCCCCCC‑CTTTT‑ACCGATTTTTCGGGGGGGCAGGGAAATACATACCCAAAGAAATGCCCC‑CCGCA‑CCAA‑AGA‑ATTTTTA‑GTTAACGGTCAGGGGaaaaacccccccctgggcaaa > 2:776243/1‑222 (MQ=255)
gACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑A‑TA‑A‑AGGTGCGGGAAACAA‑CCAA‑ACCCCCCC‑CTTTA‑CCCCCTTTTTCGGGGGGGGAGGGAAGGACAACGCCTAAAAAATTCCCACCGGCC‑CCAA‑AAA‑TTTTTAA‑GTAACCACCAGGGGAAAAACCACCTCCCGGGacaa > 2:325539/1‑236 (MQ=255)
aCATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGTTGCGGGGATCAG‑CAAG‑CCCCCCAC‑CTTTA‑CCCCATTTTTCGGTGCGGGCGTGGAAGACATCGCCAAAGAAAAACCCC‑CCGCC‑CCAC‑AGACTTTTTGA‑‑TTACCGTGCAGGGCCAAACCGCCCTCCGCGaacaaa > 2:364358/1‑238 (MQ=255)
aGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑G‑TA‑A‑AGGTGCGGGGAACAG‑CAAGACCCGCCCC‑TTTTA‑CCC‑AGTTTCCGGTGCGGCCGGGGAGGAAAAAGCCGAAACAAAGACCA‑CGGCC‑CCCA‑AGA‑ATTTTGT‑GTTACCGTGCCGGGCAAAACACCCCTCCCGGgacaaccgattc > 2:263677/1‑233 (MQ=255)
tcgggcatgtacacaagagtgaaaCGGTG‑AATGAAAAA‑GAAGGTAACA‑T‑CC‑TGGCGGT‑CCGTAA‑ATCCCACC‑C‑CGTGGG‑GG‑TGTA‑AGGGTGGCGGAAACCAG‑ACAC‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGcg‑cg < 2:77360/216‑1 (MQ=255)
ccacAAAC‑AGAAGCGGGAAAATGAACAG‑GAAGGTAATC‑T‑CC‑AGCGTTT‑CGTTAA‑TCCCCACCAG‑CGTGGC‑GG‑T‑TA‑A‑GGTGGGGGAAATCAG‑CAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑CGGCGCTCAAACTg < 2:519041/236‑1 (MQ=255)
aaaacc‑AGCAACGTGAAAATAAACAG‑GAA‑GTAAAT‑T‑CCGAGCGTTG‑TGGTAA‑CTCCCCCCAG‑CAGGGC‑GG‑T‑TA‑A‑GGTGGCGGGAACCAG‑CAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑CGGCGCTCAAACTGaa < 2:1201108/234‑1 (MQ=255)
gcaacacaacaCGGTGAAATGAAAAG‑AGAGG‑AAAT‑T‑CC‑CCGGGTTACAGTAA‑CCCCCACCAA‑AAGGGC‑GT‑T‑TA‑A‑GGTGGAGGGAAACAG‑CAAC‑ACCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑CGGCGCTCAAACTGaa < 1:702820/229‑1 (MQ=255)
cAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGTTGCGGGAATCAG‑CAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGGACAACGCTAAAGAAATGCCCA‑CGGCC‑CCCA‑AGA‑TTTTTTA‑GGTATCGTGCAGGGCAAAACCGCCTTCCGGGGACAACGATTTCAGCGGCT‑CGGCGCTCAAAATGAAc > 1:504044/1‑239 (MQ=255)
aGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGTTTCGGGAAACAG‑CAAG‑CCCGCCCC‑CTTTT‑CCCCATTTTCCGGGGGGGCAGGGAAGGACCACGCTAAAAAAAATCCCA‑CCGCA‑CCCA‑AGA‑TTTTTTA‑GTTTACGTGCCGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCCGCTCCGGGGCCCAAAATGaatcct > 2:950982/1‑234 (MQ=255)
aaCGGGAAAATGAACAG‑GAAGGTAAAT‑T‑CC‑GGCGGTC‑CGGTAA‑TTCCCCCCAG‑CATGGC‑GG‑T‑TA‑G‑GGTTGCGGAAATCAG‑CAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑CGGCGCTCAAACTGAACTCTTGCAg < 1:1071264/239‑1 (MQ=255)
tGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGTTGCGGGAATCAG‑CAAG‑CCCGCCCC‑CTTTA‑CCCCATTTTTCGGTGCGGCAGTGAAGTACATCGCCAAAAAAATACCCA‑CGGCC‑CCAA‑AGA‑TTTTTTA‑GTTACCGTGCAGGGCAAAAACGCCCTCCGGGAAAAACGATTTTCGCGGCC‑CGGGCCCCAAACTGGACCCTTTCAGAt > 2:1345907/1‑236 (MQ=255)
aaaaagaaaag‑AATGGTAAAT‑T‑CC‑AGGGGTT‑CGGTAA‑TCCCCACCAG‑AAGGGC‑GT‑T‑AA‑G‑GGTTGCGGGAATCAG‑AAAA‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑CGGCGCTCAAACTGAACTCTTGCAGAtgct < 1:148216/237‑1 (MQ=255)
aaaTGAACAGTGAAGTTAATT‑T‑CT‑GGGGTTC‑CGGTAT‑TCCCGACGAG‑CAGGGC‑GG‑T‑TA‑G‑GGTGGGGGAAAGCAG‑AAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑CGGCGCTCAAACTGAACTCTTGCAGAtgct < 2:815081/238‑1 (MQ=255)
aaTGAGCAG‑GTAGGAAAAT‑C‑CC‑AGCAGTT‑CGGTAA‑GCCCCCCCGT‑CAGGGC‑GT‑T‑TA‑A‑GGTTGCGGAAACCAG‑AAGG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑CGGCGCTCAAACTGAACTCTTGCAGATGCTgcg < 1:344983/239‑1 (MQ=255)
aaTGAACAG‑GAGGGTAATT‑C‑CG‑GGGGGGT‑CGTTAA‑TCCCCCCCCG‑CGTGGG‑GG‑T‑TA‑G‑GGTTGCGGGAATCAG‑CAAC‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑CGGCGCTCAAACTGAACTCTTGCAGATGCTgcg < 2:614651/239‑1 (MQ=255)
tgacaaG‑GAAGGTAAAT‑G‑CC‑CGCGGTT‑‑GGTAATTTCCCCCCAG‑AGTGGC‑GG‑T‑TA‑G‑GGTGGAGGAAATCAG‑CAAC‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑CGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc < 1:277568/234‑1 (MQ=255)
tGAACAG‑GAAGTAAATT‑T‑CC‑AGCGGTT‑CGTTAA‑TCCCCCCCAG‑CATGGC‑GG‑T‑TA‑A‑GTGGGCGGGAATCAG‑CAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑CGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc < 1:855977/239‑1 (MQ=255)
tGAACAG‑GAAGATAAAT‑C‑CC‑AGCGGTT‑CGGTAT‑TCCCCCCCAG‑GTGGGC‑GT‑T‑TA‑G‑GGTTGCGGGAACCAG‑CAGC‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑CGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc < 1:776243/239‑1 (MQ=255)
aaagg‑gAAGAAAAAT‑C‑CC‑AGAGGTG‑CGTGAA‑TCCCCACAGG‑CTGGGT‑GA‑T‑AA‑A‑GGTTGGGGGAATCAC‑CAAC‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑CGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc < 2:638797/233‑1 (MQ=255)
aCAG‑GAA‑GTAAATGT‑CC‑CGCGGTT‑GGGTAA‑TTCCCACCCG‑CATGGC‑GT‑T‑TA‑G‑GGTTGCGGAAATAAG‑CAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑CGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAg < 2:871218/239‑1 (MQ=255)
aG‑GAAGGTAAAT‑T‑CG‑GGCGGTT‑CGGTAA‑TTCCCACCAG‑CGTGGC‑GT‑T‑GA‑A‑GGTTGCGGAAAGCAG‑CAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑CGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc < 1:920924/234‑1 (MQ=255)
aaGGT‑AAT‑T‑CC‑CGGGGTT‑CGGGTA‑TCCCCCCCGGACAGGGT‑GG‑T‑TA‑G‑GGTTGGGGAAACAAC‑CACG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑CGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACAt < 2:976403/239‑1 (MQ=255)
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ATCAGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACAT‑TACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAAC‑AGCAACGGTGAAATGAACAG‑GAAGGTAAAT‑T‑CC‑AGCGGTT‑CGGTAA‑TTCCCACCAG‑CATGGC‑GG‑T‑TA‑A‑GGTTGCGGGAATCAG‑CAAG‑CCCGCCAC‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCA‑CGGCA‑CCAA‑AGA‑TTTTTGA‑GTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑CGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACAT > NC_000913/3862380‑3862849
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
