Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F9 I0 R1 71 67.1 1514203 90.7% 1373382 220.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,917,801 A→C 13.2% V155G (GTG→GGG)  atpG ← F1 sector of membrane‑bound ATP synthase, gamma subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,917,8010AC13.2% 226.8 / 2.3 99V155G (GTG→GGG) atpGF1 sector of membrane‑bound ATP synthase, gamma subunit
Reads supporting (aligned to +/- strand):  ref base A (54/27);  new base C (3/14);  total (57/42)
Fisher's exact test for biased strand distribution p-value = 2.80e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCA  >  NC_000913/3917574‑3918029
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                    
ccTGAAAACCCCGAGATTGGCCAAAACGGCGCAGCCGGGGAACCCGCAACGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTGCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCAc                                                                                                                                                                                                                                     <  2:580693/229‑1 (MQ=255)
    aTAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑ATGCAACATCACtttt                                                                                                                                                                                                                                 >  1:55334/1‑229 (MQ=255)
     aaaaCCTGAGATACGAAATAACGACGGAGCAGGGTTTCCAGCAACGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGGAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTa                                                                                                                                                                                                                                <  1:676349/228‑1 (MQ=255)
        aCCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAAACGGCCTTCTCCCGAGGC‑CGGCAACATCCCTTTTCCCg                                                                                                                                                                                                                             >  2:406724/1‑229 (MQ=255)
          cTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGCGTTAATAAATTTATTGCTGACAATGAAAACCTTGTCCAGACGGCCTTCGTAGTAGGC‑CTGCAACATCACCTTTACCGGa                                                                                                                                                                                                                           >  1:476160/1‑229 (MQ=255)
            gagaTTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTCCCGGAcc                                                                                                                                                                                                                         >  1:437351/1‑229 (MQ=255)
              taTTCGGAATAACGAGGCGGCAGGGTATCCATCAACGTCTTCGGATCGGTTTCGTACAGGTAATCCCAGGATTTATGGTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGa                                                                                                                                                                                                                       <  2:76639/228‑1 (MQ=255)
              gaTTCGACATAACGACGCATCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTCCTGACAATGTAAAGCTTGTCCAGACGGACTTCGTCGTAGGC‑CTGCAACATCCCTTTTACCGGACCg                                                                                                                                                                                                                        >  1:40929/1‑228 (MQ=255)
                   gACATAAGGACGCAGTAGGGTACCCAGCAAGGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGt                                                                                                                                                                                                                  <  1:485661/229‑1 (MQ=255)
                        aaggacgCTGCAGGGTTTCCAGCAACGCCTTCGGATTGGGTTGGGTCGGGTAATCCCAGGATTTATGTTTCAGATCATGATCATCTGATGCGGGTAACGGCAGCATCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGa                                                                                                                                                                                                             <  2:584944/226‑1 (MQ=255)
                        aaCGCCGCAGAAGAGTATCCAGCAACGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGa                                                                                                                                                                                                             <  1:75637/229‑1 (MQ=255)
                        aaCGACGCAGCAGGGTATCCAGCAACGCCTTGGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCgg                                                                                                                                                                                                              <  1:135084/228‑1 (MQ=255)
                        aaCGACGAGGCAGGGTATCCCGCAACGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGACGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGa                                                                                                                                                                                                             <  1:259703/229‑1 (MQ=255)
                         acgacgCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGa                                                                                                                                                                                                             <  2:55334/228‑1 (MQ=255)
                         acgacgCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAAACTCAGAAATGGTGTTAATAAATTTGTTGCTGACAAGTTAAAGCTGGTCAAGACGGACGTGCTCGTAGGC‑CTGCAACCTAACTTTTCCCGGGCCCATCAGTGTGGAc                                                                                                                                                                                                            >  2:647003/1‑229 (MQ=255)
                          cgacgCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGa                                                                                                                                                                                                             <  1:393618/227‑1 (MQ=255)
                          agcggcaggaGGGTATTCAGTAACGGCTGCGGATCGGGTTCGTAATGGTAATTCCAGGATTTATTGTTCAGATCATTCTCATCTGATACCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGACTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGa                                                                                                                                                                                                             <  1:433121/223‑1 (MQ=255)
                           gacgcgagagGGTATCCAGGAGCGCATTCGGATCGGGTTCGTACAGGTAATCGCAGGATTTATGTTTCAGATCATCATCATCTGATGCAGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACa                                                                                                                                                                                                           <  1:722173/220‑1 (MQ=255)
                               cagcagGGTATCCAGCAACGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCAATTTTACCGGACCGATACGTTCGGACAGGGa                                                                                                                                                                                                       >  1:144449/1‑228 (MQ=255)
                               cagcagGGTATCCAGCAACGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAAAATCACTTTTACCGTGCCGAttctttcggcacagcaa                                                                                                                                                                                                      >  1:356325/1‑213 (MQ=255)
                                  cagGGTATCCAGCAACGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATCGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGAAGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACAGGACCGTTCAGGTCGGACAGGGAAggg                                                                                                                                                                                                   >  1:121507/1‑229 (MQ=255)
                                    gggTATCCAGCAACGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGtt                                                                                                                                                                                                 <  1:520094/229‑1 (MQ=255)
                                      gttaacgtacatcccgtcgggtcgggATTGGAAAGGTAATCCCGAGATTGATGGTTAAGATCATCCGCATGCGGTTGCGGTAACGGCAGCGGCGGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGGCGTAGGC‑ATGCAACATCCCTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTAt                                                                                                                                                                                               <  2:159624/213‑1 (MQ=255)
                                             gCAACTCCTTCGGATCGGGTTTGTACGGGTAAGCCCAGGATTTATGTTTCAGGTCAGCAGCATCGGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCa                                                                                                                                                                                         <  2:344848/228‑1 (MQ=255)
                                             gCAACCCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCa                                                                                                                                                                                         <  1:710252/228‑1 (MQ=255)
                                               aaCGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATAACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGGTATCCCCCCTGc                                                                                                                                                                                      >  1:487737/1‑229 (MQ=255)
                                                aCGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCCTGcc                                                                                                                                                                                     >  1:97994/1‑229 (MQ=255)
                                                   ccTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCCGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCTTAGGA‑CTGCAACATCACTTTTTCCGGCCCGATCAGTTCGGCCAGGGGAGGGGTAT‑CCCCATGCCGGTg                                                                                                                                                                                 >  2:659010/1‑229 (MQ=255)
                                                      tggggtCGGGTTCTTACAGGTAATCCCAGGATTTGTTTTGCAGATCATCATCATCGTATGCCGGTAACGGCTGCAGCTGGCTGA‑TGGTCGGAACCTGGGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGAc                                                                                                                                                                               <  2:364809/224‑1 (MQ=255)
                                                       cGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGCCCAGACGGCCTTCGTCGTAGGC‑CTGCAAAATCACTTTTACCGGACCGATCAGTTCGGCCAGGGAAGGGTTATCCCCCATTCCGGTGAcc                                                                                                                                                                              >  1:265797/1‑229 (MQ=255)
                                                            cGGGTTCGTACAGGTAATCCAAGGGTTGAGTTTTCAGATCTTCATCATTTGATGCCGGTAACGGCCGTAGCTGACTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGCCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGc                                                                                                                                                                         <  1:288505/229‑1 (MQ=255)
                                                              ggTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTATGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGCAGGGTTATCCCCCATGCCGGTGACCTGGGca                                                                                                                                                                        >  1:647650/1‑228 (MQ=255)
                                                              ggTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCCCTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTGATCCCCCATGCCGGTGACCTGGGca                                                                                                                                                                        >  1:15217/1‑228 (MQ=255)
                                                              ggTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGca                                                                                                                                                                        >  1:598719/1‑228 (MQ=255)
                                                                    tACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACAt                                                                                                                                                                 >  1:488243/1‑229 (MQ=255)
                                                                         gTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTgccg                                                                                                                                                            >  1:363117/1‑229 (MQ=255)
                                                                             tCCCATGATTTTTTTTTGAGTTCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCCGAACCTGGGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCa                                                                                                                                                        <  2:168769/229‑1 (MQ=255)
                                                                                   gATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGAACCACCATTGCCGCCCACGGAGt                                                                                                                                                  >  1:676666/1‑229 (MQ=255)
                                                                                    aTTTTTGTTTCAGTATATAATCTTCGGAGTCCGGTAACGGCAGCATCTTG‑TGACAGGTCGAAACCTGAGGCATGGTGTTAATAAATTTGTTGCTAACAATGGAAAGCTGGGCCAGACTGCCTTCGTCGTAGGC‑CGGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTAGCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAg                                                                                                                                                   <  2:144449/227‑1 (MQ=255)
                                                                                        ttttttCAGATCATCATAAGTTGTTGGCGGTAACGGCAGCAGCGAGCTTA‑GGGTCGGAACCTGAGACATGGTGTTAATAAATTGGTTGCTGACAATTGAAAGCTTGGCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGTGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTgaag                                                                                                                                             <  2:716632/226‑1 (MQ=255)
                                                                                        aTGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACAGGACCGATCAGTTCGGCCAGGGAAGGGTTATCCCACCTGACGGTGACCTCGGCCACAACATTGCCGCCCCCGGAATTgaa                                                                                                                                              >  2:713980/1‑228 (MQ=255)
                                                                                             tCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCTTGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACg                                                                                                                                         >  1:230502/1‑228 (MQ=255)
                                                                                             tCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACgc                                                                                                                                        >  1:636424/1‑228 (MQ=255)
                                                                                                gATCATCCTCATCTGGTGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTGTGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGacac                                                                                                                                     <  2:487737/229‑1 (MQ=255)
                                                                                                 atcatcatcatcTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGacac                                                                                                                                     >  1:530166/1‑228 (MQ=255)
                                                                                                    atcatcatcTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGcca                                                                                                                                 >  1:171986/1‑228 (MQ=255)
                                                                                                    atcatcatcTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAAACTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGCTTTGAACAACGACACGcc                                                                                                                                  >  1:204646/1‑228 (MQ=255)
                                                                                                           tcTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGACCGACACGCCTTTCGAGc                                                                                                                          >  1:676907/1‑229 (MQ=255)
                                                                                                           tcTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TCGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCgcgc                                                                                                                          >  1:10398/1‑229 (MQ=255)
                                                                                                               ttGCCGGTAAGGGGCGGAGGGGGGTGA‑AGGTCGGGACCTGAGAGATGGGTTTAAAAAATTTGGTGGTGAAAATGGAAAACTTGCCCAGAGTGGCTGCGTCTTAGGC‑CTGCAACCTCCCTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTTCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGAt                                                                                                                      <  2:204646/228‑1 (MQ=255)
                                                                                                               aTGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTTGGCAACAACATTGCCGCCCACGGCGTTGAAGAAAGACAACCCTTTCGAGCCgcc                                                                                                                      >  2:598569/1‑227 (MQ=255)
                                                                                                                     gTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATTCCGGGGGCCTGGGCAACAACATTGCCGCCCACGGACGTGAAAAACGCCACCCCTTTCGAGccactgacttc                                                                                                                >  2:479743/1‑220 (MQ=255)
                                                                                                                      tAACGGCAGCAGCTGGCTTA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGGAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCCCTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCg                                                                                                               <  1:51648/229‑1 (MQ=255)
                                                                                                                            cagcagCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCACCATCACTTTTAACGGACCGATAAGTTCGGACAGGGAAGGGTTACCCCCCCTGCCGGTGAACTGGGCATCAACATACCGTCCCACGGGACTCACGAAGCACACGCCTTTCTAGCCCAGCACTGCGAgggag                                                                                                         >  2:134679/1‑226 (MQ=255)
                                                                                                                                 gttggttgA‑TGGTCGGAACCTGAGACAGGGTTTTAAGAAATTTGTTGATGACAATGTAAAGCTTGTCCAGACGGCCGTCGTCGTAGGC‑CTGCAACATCCCTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATCGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTg                                                                                                    <  2:411484/227‑1 (MQ=255)
                                                                                                                                           tGGTCGGAACCTGAGACATGGGGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTCCGTCGTAGGC‑CTGCACCATCACTTTTATCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATTCCGGTGACCTGGGCACCAACATTGCCTCCCACGAGGTTGACGAACGACACCCATTTCGAGCCGTTCATTGCGCGGCCGCCTTTAACCCCtag                                                                                           >  2:169492/1‑227 (MQ=255)
                                                                                                                                            ggTCGGAACCTGGGACATGGTTTTAAATAATTTGTTTCTGACAATGTAAAGCTTGGCCAGACGGCCTTCGTCGTAGGC‑CTGAAACATCACTTTTCCCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATCGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTg                                                                                          <  2:318784/229‑1 (MQ=255)
                                                                                                                                              gcggacctgggaaCATGGGTTTAATAAATTTGTTGCTGAAAATTTAAAGCTTGTCCAGACGGCCTTCGGCGTAGGC‑CTGCAAACTCCCTTTTCCCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGt                                                                                         <  2:230502/216‑1 (MQ=255)
                                                                                                                                                ggAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCTTAGGC‑CAGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGACGGGTTATCCCCCATGCCGTTGACCTGGCCACCAACATTGCCCCCCACGAAGTTGAAGAACGACACCCCTTTCGAGGCACCCCTTGCGAGGTccccataaaggcgattgtcgg                                                                                      >  2:370109/1‑209 (MQ=255)
                                                                                                                                                         gaCATGGTTTTAATAAATTTGGTTGTGACAATGTAAACCTGGGCCAGGCGGCCTTCGTCGTAGGC‑CTGCAAACTCCTGTTCACGGGCCCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACACCATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCt                                                                             <  2:10398/229‑1 (MQ=255)
                                                                                                                                                              ggTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGGGTTGAAGAACGACACGCCTTTCGGACCGACCATGTCAGGGGCCAATTGAACCCCTTGTCCGGCCCAGGTCTTCAtt                                                                        >  2:740704/1‑229 (MQ=255)
                                                                                                                                                              ggTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCACTGCCGGTGCCCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCACATTTAACCCCTTTGTCGGTCCAGGACTTCAtt                                                                        >  2:425859/1‑229 (MQ=255)
                                                                                                                                                              ggTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGGTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGCTCATTCCGAGGTCGCTTTGAACGCCTTTTTCGGTCCCGGCCTTCAtt                                                                        >  1:360582/1‑229 (MQ=255)
                                                                                                                                                                    aataaATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGGCCAGGGCTTCATTTCCGcc                                                                  >  1:391139/1‑229 (MQ=255)
                                                                                                                                                                        taTTTTTTTCTCACAATGTAAAGTTTGTCCAGACGGCCTTCGTCCGAGGC‑CTGAAACATCCCTTTTACCGGACCGATGAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCcagca                                                              <  2:391139/228‑1 (MQ=255)
                                                                                                                                                                        aatttttttttaaaaaTTTAAAGCTTGGCCAGACGGCCTTGCCCGGGTGC‑CTGCAACACCCCTTTTCCCGGCCCGATCAGTTCGGGCAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCcagca                                                              <  2:667984/215‑1 (MQ=255)
                                                                                                                                                                         aTTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGCCTTCATTTCCGCcagca                                                              >  1:667985/1‑228 (MQ=255)
                                                                                                                                                                          tttGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCCTGCCGGCTACCTGGGCAACAACATTGCCCCCACCGGAGTTGAAGACCGACACGCCTTTCGGACCGAACCTTGCGAGGTCCGCTTAGACGCCTTGGTCGGTCACGGTCTCACTTTTCGCCAGCGGt                                                            >  2:436422/1‑229 (MQ=255)
                                                                                                                                                                          tttGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGt                                                            >  1:501569/1‑229 (MQ=255)
                                                                                                                                                                          tttGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCCATCATTCCGAGGTCGCTTTGAAACCCTTTTTCGGGCCAGGTTTTCCTTTCCCCcacccgt                                                            >  2:28170/1‑224 (MQ=255)
                                                                                                                                                                                  tGAAAATGTAAAGTTTGTCCAGGCGGGCTTCGGGGGGGTC‑CGGCAACATCCCTTTTCCCGGACCGATCAGTTCGGACAGGGAAGGGTTAGCCCCCAGGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGaa                                                    <  2:97994/229‑1 (MQ=255)
                                                                                                                                                                                    aCAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTGGATCCGATCATTTCGAGGTCGCATTGAACGCCTTTGTCGGGCCAGGTCTTACTTTCCGCCAGCAGTTTTTTGAACa                                                  >  1:466720/1‑229 (MQ=255)
                                                                                                                                                                                    aCAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGACCATTGCGAGGTCCCATTGAAGGCCTTTGCCGGCCCAGGCCTTCATTTCCCCCCGCAGTTTTTTCaaaa                                                  >  1:256940/1‑227 (MQ=255)
                                                                                                                                                                                        tGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑ATGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGATATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTTCCCGGCCGCATTGAACGCCTTTTACGGTCCCGGTCTTCCTTTCCGCCAGCAGTGTTTTGAACAGGt                                               >  1:96602/1‑228 (MQ=255)
                                                                                                                                                                                         ttgaatctttgcgatgcGGCGTTCGTGGGAGGC‑CTGGAACCTCACTTTGTCCGGACCGAGCAGTTCGGATAGGGAAGGGTTAGCCCCCAGGCCGGTGACCTGGGCAACAACATTGCCGCCCCCGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTa                                             <  2:356325/213‑1 (MQ=255)
                                                                                                                                                                                         ttacagtttGCCCAGACGGCTTTTCTCGGAGGC‑CTGCAACATCTCTTTTACCGGACCGCTCAGTCTGGACAGGGAAGGGTTTGCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTGTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTa                                             <  2:530166/222‑1 (MQ=255)
                                                                                                                                                                                         ttAAAGCTTGGCCAGACGGCCTGGGGCGTAGCCACTGC‑ACCGCCCTTTTCCCGGACCGACTATGTCGGAAAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCAAGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTa                                             <  2:437351/228‑1 (MQ=255)
                                                                                                                                                                                                  gTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGCAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGGCACCTTGAACGCCTTTTGCGGTCCCGGTCTTCATTTCCGCCCCCAGGTTTTTCAAAAGGTTAATTTTccca                                    >  2:403798/1‑226 (MQ=255)
                                                                                                                                                                                                  gTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCaaa                                    >  1:550219/1‑229 (MQ=255)
                                                                                                                                                                                                  gTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGCCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTGAATGttacaa                                    >  2:102171/1‑225 (MQ=255)
                                                                                                                                                                                                   tCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGGCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAac                                   >  1:604834/1‑229 (MQ=255)
                                                                                                                                                                                                   tCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGGCGCATTGAAAGCCTTTGTCGGTCCAGGGCTTCATTTCCGCCACCAGTTTTTTGAAAAGGTGAAATATCAAac                                   >  2:305110/1‑229 (MQ=255)
                                                                                                                                                                                                        aCGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCCTTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTTACCCGGGTAATGTTCAAaacaccc                              >  2:646261/1‑228 (MQ=255)
                                                                                                                                                                                                          tctcttcttCGTGGGC‑CGGCACCATCACTTTTCCCGGACCGATCAGTTCGGACAGGGAAGGGTTACCCCCCATGCCGGGGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGca                            <  2:125343/226‑1 (MQ=255)
                                                                                                                                                                                                          ggCCTTCGTAGTAGGC‑CTGCAACATCCCTTTGACCGGACCGATCAGTTCGGACAGGGAAGGGTTAACCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGca                            <  1:148859/229‑1 (MQ=255)
                                                                                                                                                                                                          ggCCTTCGGCGTAGGC‑CTGAAACCTCCCTTTTCCCGGCCCGAGCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACCCGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGca                            <  2:488243/229‑1 (MQ=255)
                                                                                                                                                                                                            ccTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGATCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTCTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGCACAGGTGAATGTTCAAACCACCGcaca                          >  1:285776/1‑229 (MQ=255)
                                                                                                                                                                                                            ccTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGCCTTCATTTCCGCCAGCAGGTTTTTGTACAGGTTAATGTTCAAACCACCGcaca                          >  1:608924/1‑229 (MQ=255)
                                                                                                                                                                                                             cTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGGCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCCCACaa                         >  1:437195/1‑229 (MQ=255)
                                                                                                                                                                                                             cTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATCGCGAGGACGCATTGAACGCCTTTGTCGGTCCCGGCCTTCATTTCCGCCACCAGCTTTTTGACCAGGTTAATGTTCAAACCACCGCACaa                         >  2:45053/1‑229 (MQ=255)
                                                                                                                                                                                                                     ggggC‑CTGCAACCTCCCTTTTCCCGGCCCGATTAGTTCGGACAGGGAGGGGTTACCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTCAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCAcggt                 <  2:727970/227‑1 (MQ=255)
                                                                                                                                                                                                                           cTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGACCAGGTTAATGTTCAAACCACCGCACAAACCACggtcggtc            >  1:535710/1‑229 (MQ=255)
                                                                                                                                                                                                                            tgaaaCATCCCTTTTCCCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCAAT‑CCGGTGACCTGGCCAACAACATTGCCGACCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGa          <  1:659011/226‑1 (MQ=255)
                                                                                                                                                                                                                            tGCAACCTCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCcagca                                                              <  2:652180/178‑1 (MQ=255)
                                                                                                                                                                                                                            tGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCcagca                                                              >  1:652181/1‑178 (MQ=255)
                                                                                                                                                                                                                             gccaccccACTTTTCCCGGACCGATCAGTCGGGACAGGGAAGGGTTACCCCCCATGCCGGGGCCCTGGGCAAACACATTGCCCCCCACGGGGGTGAAAACCGCCCCGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGa          <  2:501569/222‑1 (MQ=255)
                                                                                                                                                                                                                              cAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACCCGCCTTTCGAGCCGATCATTGCGCGGTCGCATTCAACGCCTTTGTCGGTCCAGGCCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTCCAAACAACCCCACAAACCAAGgtcggtcg           >  1:727971/1‑227 (MQ=255)
                                                                                                                                                                                                                              cAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGa          <  1:479743/228‑1 (MQ=255)
                                                                                                                                                                                                                                   tCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACTGTCGGTCGAcacc      >  1:425082/1‑227 (MQ=255)
                                                                                                                                                                                                                                     aCTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTTACCAGGTTAATGTTCCAACCACCGCCCAAACCACGTTCGGTCGACAccacca  >  1:523068/1‑229 (MQ=255)
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                    
CCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGTACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGA‑TGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGC‑CTGCAACATCACTTTTACCGGACCGATCAGTTCGGACAGGGAAGGGTTATCCCCCATGCCGGTGACCTGGGCAACAACATTGCCGCCCACGGAGTTGAAGAACGACACGCCTTTCGAGCCGATCATTGCGAGGTCGCATTGAACGCCTTTGTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCA  >  NC_000913/3917574‑3918029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A