Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F187 I0 R2
|
632 |
116.8 |
4275814 |
98.0% |
4190297 |
140.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,901,029 |
Δ1 bp |
6.7% |
coding (557/1557 nt) |
yoaE ← |
putative membrane protein/conserved protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,901,029 | 0 | A | . | 6.7%
| 361.4
/ 18.1
| 105 | coding (557/1557 nt) | yoaE | putative membrane protein/conserved protein |
| Reads supporting (aligned to +/- strand): ref base A (48/50); new base . (3/4); total (51/54) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.99e-01 |
Only 100 of 108 total aligned reads displayed.
TTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGAC > NC_000913/1900885‑1901174
|
ttGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGcaccaccac < 2:862825/149‑1 (MQ=255)
gACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGt < 4:1030495/148‑1 (MQ=255)
aCGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTg < 4:922546/148‑1 (MQ=255)
gcgcAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGCAGCTCAGCCAGAGCACAAGCACCGTgg‑gg < 2:963546/149‑1 (MQ=255)
gcgcAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTgg‑gg > 2:659843/1‑149 (MQ=255)
cgcAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTgg‑gg > 3:932898/1‑148 (MQ=255)
cgcAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTgg‑gg < 4:719367/148‑1 (MQ=255)
cgcAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGt > 2:511827/1‑149 (MQ=255)
aaTCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGc < 3:13277/148‑1 (MQ=255)
aaTCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCt < 1:266797/149‑1 (MQ=255)
aTCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCt < 3:24704/148‑1 (MQ=255)
cTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGt < 1:837327/149‑1 (MQ=255)
tGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAAGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGCCAGAGCACCACCACCGTGG‑GGTGCTGGtt < 2:438345/149‑1 (MQ=255)
gTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTa < 3:430155/148‑1 (MQ=255)
ttAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAAc > 2:421474/1‑149 (MQ=255)
aaaCACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGa > 2:667858/1‑149 (MQ=255)
aaaCACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACC‑CCACGGTGGTGGTGCtct > 2:683804/1‑140 (MQ=255)
aaaCACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACC‑CCACGGTGGTGGTGCtct < 1:683804/142‑3 (MQ=255)
acacTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCGCCAGACTCAGATCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAAt > 2:767314/1‑149 (MQ=255)
acacTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAAt > 2:625931/1‑149 (MQ=255)
cacTTCGATGATGATCGAGAAGCCAATCGCGGTATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAAt < 3:337453/148‑1 (MQ=255)
cacTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATc < 2:445214/149‑1 (MQ=255)
cTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAATCTCAGACAGAGCACCACCACCGTGG‑CGTGCTGGTTATCGAATcg < 4:579533/148‑1 (MQ=255)
tCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATcgcg < 4:136622/148‑1 (MQ=255)
gatgatgatCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTc < 3:342553/148‑1 (MQ=255)
atgatCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCgg < 1:55913/149‑1 (MQ=255)
atCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGttt < 1:872564/149‑1 (MQ=255)
tCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGttt < 3:926064/148‑1 (MQ=255)
cGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTg > 4:414128/1‑148 (MQ=255)
gagaAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTgg < 4:133801/148‑1 (MQ=255)
gagaAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGa > 1:1037330/1‑149 (MQ=255)
gCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCa < 1:247321/149‑1 (MQ=255)
ccAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCa > 4:1013112/1‑148 (MQ=255)
ccAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCa > 3:367142/1‑148 (MQ=255)
ccAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAg < 1:659843/149‑1 (MQ=255)
tACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGc < 1:511827/149‑1 (MQ=255)
tAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCt > 4:661092/1‑97 (MQ=255)
tAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCt < 3:965493/97‑1 (MQ=255)
tAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATcg > 3:776899/1‑110 (MQ=255)
tAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATcg < 4:776899/110‑1 (MQ=255)
tAACCTTTCGGAATGTGGAAACCGAAACCTTCTGACACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCt < 3:661092/97‑1 (MQ=255)
aaCCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGc > 3:1043552/1‑148 (MQ=255)
aaCCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCa > 2:384922/1‑149 (MQ=255)
aCCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCa < 4:275463/148‑1 (MQ=255)
ccTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCaa < 3:965943/148‑1 (MQ=255)
cTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGAAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGCCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAAt > 4:891301/1‑148 (MQ=255)
tttCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAGCAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATc < 3:799459/148‑1 (MQ=255)
tttCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATg < 3:1022451/122‑1 (MQ=255)
tttCGGAATGTGGAAAACGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATc < 3:1013112/148‑1 (MQ=255)
ttCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACC‑CCACGGTGGTGGTGCtc > 3:607699/1‑91 (MQ=37)
tCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACt > 1:205506/1‑149 (MQ=255)
ggAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTa > 3:51647/1‑148 (MQ=255)
aaTGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTAcc > 3:185047/1‑148 (MQ=255)
aTGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTAccgc > 1:453303/1‑149 (MQ=255)
tgGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTAccgccg < 4:932898/148‑1 (MQ=255)
tgGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GCTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTAccgccg > 4:635796/1‑148 (MQ=255)
gaaaccgaaaccTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCgccgcc > 3:165577/1‑148 (MQ=255)
accgaaaccTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCcatca < 1:936178/149‑1 (MQ=255)
cgaaaccTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCatcatc > 2:803380/1‑149 (MQ=255)
ttCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACC‑CCACGGTGGTGGTGc > 3:409059/1‑67 (MQ=37)
ttCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACC‑CCACGGTGGTGGTGc < 4:409059/67‑1 (MQ=37)
tCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGCTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCggta > 4:908349/1‑146 (MQ=255)
caccaGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATgg < 4:51647/148‑1 (MQ=255)
cacaCTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTa < 3:251544/145‑1 (MQ=255)
aGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTaa > 4:820757/1‑148 (MQ=255)
aGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAAc < 1:384922/149‑1 (MQ=255)
aCTCAGACGAATCATTAACAGGAAGCGCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCAATACAGCCGCCATCATCACCGGCAGATGGTTGACCa > 2:602844/1‑149 (MQ=255)
tCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGa > 2:599879/1‑82 (MQ=255)
cAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATcc < 2:205506/149‑1 (MQ=255)
aGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAAt > 1:233026/1‑107 (MQ=255)
gACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATcc > 2:655002/1‑147 (MQ=255)
gACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATcc < 1:655002/147‑1 (MQ=255)
aCCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCt < 3:414128/148‑1 (MQ=255)
aCCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTa > 1:392837/1‑149 (MQ=255)
aTCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGc > 2:90786/1‑149 (MQ=255)
ttAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGt > 3:414657/1‑148 (MQ=255)
tAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTa < 3:247435/148‑1 (MQ=255)
aCAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAAtt > 2:1028844/1‑149 (MQ=255)
aCAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAAt > 4:1022391/1‑148 (MQ=255)
cAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAAtt > 4:625950/1‑148 (MQ=255)
ggAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTAc > 4:745238/1‑148 (MQ=255)
gAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTAcc > 4:898137/1‑148 (MQ=255)
gCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCAcc < 1:219542/109‑1 (MQ=255)
gCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCAcc > 2:219542/1‑109 (MQ=255)
tCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATcc > 1:998541/1‑149 (MQ=255)
cagacagaGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATcc > 4:10250/1‑148 (MQ=255)
cagacagaGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATcc > 4:371414/1‑148 (MQ=255)
cagacagaGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATcc > 3:855761/1‑148 (MQ=255)
cagacagaGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATcc > 4:14541/1‑148 (MQ=255)
gacagaGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAAc < 2:1061555/149‑1 (MQ=255)
gacagaGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAAc < 2:392837/149‑1 (MQ=255)
gacagaGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAAc < 2:754773/149‑1 (MQ=255)
cagaGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACg < 3:745238/148‑1 (MQ=255)
gagCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACgag > 3:717607/1‑148 (MQ=255)
agCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACgaga < 4:414657/148‑1 (MQ=255)
agCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACgaga < 4:1043552/148‑1 (MQ=255)
agCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGagaa < 1:1028844/149‑1 (MQ=255)
agCACCACCACCGTGG‑GGTGCTAGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTGCCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGagaa < 1:964103/149‑1 (MQ=255)
caccaccacCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGagaaga < 2:82457/149‑1 (MQ=255)
accaccaccGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGAc > 1:23804/1‑149 (MQ=255)
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TTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGAC > NC_000913/1900885‑1901174
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
