Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A35 F9 I0 R1 1164 192.0 7567036 97.0% 7340024 130.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,664,593 G→T 11.6% A30S (GCC→TCC)  dmsD → twin‑argninine leader‑binding protein for DmsA and TorA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,664,5930GT11.6% 199.9 / 13.0 60A30S (GCC→TCC) dmsDtwin‑argninine leader‑binding protein for DmsA and TorA
Reads supporting (aligned to +/- strand):  ref base G (28/25);  new base T (4/3);  total (32/28)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AATGGCTATTGCAGGTTAACAAATTGGTGCGGGGCAACCCGCACATTTCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGCGTTTGTTTGTCGGCCC  >  NC_000913/1664445‑1664741
                                                                                                                                                    |                                                                                                                                                     
aaTGGCTATTGCAGGTTAACAAATTGGTGCGGGGCAACCCGCACATTTCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAg                                                                                                                                                       <  1:1116957/149‑1 (MQ=255)
              gTTAACAAATTGGTGCGGGGCAACCCGCACATTTCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAG‑GTGCGGCTTCCGCActctct                                                                                                                                            >  1:1524136/1‑140 (MQ=255)
                       ttGGTGCGGGGCAACCCGCACATTTCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCgg                                                                                                                                    <  2:1643171/144‑1 (MQ=255)
                       ttGGTGCGGGGCAACCCGCACATTTCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCgg                                                                                                                                    >  1:1643171/1‑144 (MQ=255)
                             cGGGGCAACCCGCACATTTCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGc                                                                                                                                      >  1:685642/1‑136 (MQ=255)
                             cGGGGCAACCCGCACATTTCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGc                                                                                                                                      <  2:685642/136‑1 (MQ=255)
                                      ccGCACATTTCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAG‑GTGCGGCTTCCGCACTCTCTgga                                                                                                                                         <  3:184090/124‑2 (MQ=255)
                                      ccGCACATTTCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAG‑GTGCGGCTTCCGCACTCTCTgga                                                                                                                                         >  4:184090/1‑123 (MQ=255)
                                         cacaTTTCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAG‑GTGCGGCTTCCGCACTCTCTgga                                                                                                                                         >  4:352476/1‑120 (MQ=255)
                                         cacaTTTCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAG‑GTGCGGCTTCCGCACTCTCTgga                                                                                                                                         <  3:352476/121‑2 (MQ=255)
                                                         aGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTAc                                                                                             >  4:548376/1‑149 (MQ=255)
                                                           gAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCa                                                                                           >  4:20780/1‑149 (MQ=255)
                                                                 cccATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGt                                                                                                      <  1:152908/132‑1 (MQ=255)
                                                                 cccATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGt                                                                                                      >  2:152908/1‑132 (MQ=255)
                                                                  ccATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGt                                                                                    >  3:1554352/1‑149 (MQ=255)
                                                                      ttttCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCAtt                                                                                <  3:548376/149‑1 (MQ=255)
                                                                        ttCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAg                                                                              <  4:1554352/149‑1 (MQ=255)
                                                                                 aGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCAt                                                                                 >  2:1089503/1‑137 (MQ=255)
                                                                                 aGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCAt                                                                                 <  1:1089503/137‑1 (MQ=255)
                                                                                  gATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGt                                                                    <  3:20780/149‑1 (MQ=255)
                                                                                            cTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCtttt                                                          >  3:1507179/1‑149 (MQ=255)
                                                                                                           tgtTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGc                                                                                      <  2:1387855/106‑1 (MQ=255)
                                                                                                           tgtTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGc                                                                                      >  1:1387855/1‑106 (MQ=255)
                                                                                                             ttGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGAc                                                                                                                      >  3:19363/1‑72 (MQ=255)
                                                                                                             ttGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGAc                                                                                                                      <  4:19363/72‑1 (MQ=255)
                                                                                                               gggCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAg                                                                                                       >  2:1540282/1‑85 (MQ=255)
                                                                                                               gggCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAg                                                                                                       <  1:1540282/85‑1 (MQ=255)
                                                                                                                 gcgcgcTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCa                                                                                                                           <  3:175138/63‑1 (MQ=255)
                                                                                                                 gcgcgcTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCa                                                                                                                           >  4:175138/1‑63 (MQ=255)
                                                                                                                   gcgcTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCa                                   >  3:1894094/1‑149 (MQ=255)
                                                                                                                     gcTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACg                                 >  1:1549931/1‑149 (MQ=255)
                                                                                                                     gcTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACg                                 >  1:76170/1‑149 (MQ=255)
                                                                                                                        gTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGccc                              >  2:665110/1‑149 (MQ=255)
                                                                                                                        gTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGccc                              >  4:564414/1‑149 (MQ=255)
                                                                                                                        gTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGccc                              >  4:252659/1‑149 (MQ=255)
                                                                                                                              ttaCGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTg                                                                                                     <  1:1617916/72‑1 (MQ=255)
                                                                                                                              ttaCGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTg                                                                                                     >  2:1617916/1‑72 (MQ=255)
                                                                                                                               taCGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTg                       <  4:1507179/149‑1 (MQ=255)
                                                                                                                                   aaccAGAG‑GTGCGGCTTCCGCACTCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGa                                            >  1:955469/3‑124 (MQ=38)
                                                                                                                                   aaccAGAG‑GTGCGGCTTCCGCACTCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGa                                            <  2:955469/122‑1 (MQ=38)
                                                                                                                                    tCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGc                  >  1:1018841/1‑149 (MQ=255)
                                                                                                                                    tCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGc                  <  3:564414/149‑1 (MQ=255)
                                                                                                                                    tCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGc                  >  1:1517468/1‑149 (MQ=255)
                                                                                                                                    tCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGc                  <  1:665110/149‑1 (MQ=255)
                                                                                                                                      cAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGa                                                                  <  3:942896/99‑1 (MQ=255)
                                                                                                                                      cAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGa                                                                  >  4:942896/1‑99 (MQ=255)
                                                                                                                                       agagagTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGa                                                      >  2:530828/1‑110 (MQ=255)
                                                                                                                                       agagagTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGa                                                      <  1:530828/110‑1 (MQ=255)
                                                                                                                                          gagTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGCgtttgt            <  3:252659/149‑1 (MQ=255)
                                                                                                                                           agTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGCgtttgtt           >  3:1487747/1‑149 (MQ=255)
                                                                                                                                           agTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGCgtttgtt           <  4:1894094/149‑1 (MQ=255)
                                                                                                                                           agTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGCgtttgtt           <  2:1549931/149‑1 (MQ=255)
                                                                                                                                            gTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGCgtttgttt          <  2:1517468/149‑1 (MQ=255)
                                                                                                                                             tGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGCGtttgtttg         >  1:194566/1‑149 (MQ=255)
                                                                                                                                              gCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGCGTttgtttgt        <  2:76170/149‑1 (MQ=255)
                                                                                                                                               cGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGCGTTTGTTTGTc       >  3:1579536/1‑149 (MQ=255)
                                                                                                                                               cGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGCGTTTGTTTGTc       <  2:194566/149‑1 (MQ=255)
                                                                                                                                                ggAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCtttt                                                          >  2:812168/1‑97 (MQ=255)
                                                                                                                                                ggAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCtgtt                                                          <  1:812168/97‑1 (MQ=255)
                                                                                                                                                 gAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGCgtttgt            <  4:1062035/142‑1 (MQ=255)
                                                                                                                                                 gAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGCgtttgt            >  3:1062035/1‑142 (MQ=255)
                                                                                                                                                    gCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGCGTTTGTTTGTCGGccc  <  2:1018841/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
AATGGCTATTGCAGGTTAACAAATTGGTGCGGGGCAACCCGCACATTTCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCAC‑CTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGCGTTTGTTTGTCGGCCC  >  NC_000913/1664445‑1664741

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A