Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F56 I0 R1
|
215 |
141.2 |
6785521 |
95.3% |
6466601 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,291,084 |
A→C |
27.4% |
K195N (AAA→AAC) |
narP → |
response regulator in two‑component regulatory system with NarQ |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,291,084 | 0 | A | C | 27.4%
| 188.0
/ 109.9
| 128 | K195N (AAA→AAC) | narP | response regulator in two‑component regulatory system with NarQ |
| Reads supporting (aligned to +/- strand): ref base A (51/42); new base C (21/14); total (72/56) |
| Fisher's exact test for biased strand distribution p-value = 6.91e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.85e-02 |
Only 100 of 129 total aligned reads displayed.
CACGAGCTGGCACAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGCTGAGATTT > NC_000913/2290986‑2291183
|
cACGAGCTGGCACAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAAc < 1:2194330/100‑1 (MQ=255)
gAGCTGGCACAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCa < 2:1280249/100‑1 (MQ=255)
gCTGGCACAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAAt > 2:1271546/1‑100 (MQ=255)
cTGGCACAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATg > 2:2077034/1‑100 (MQ=255)
tGGCACAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGt > 2:6550/1‑100 (MQ=255)
gCACAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTcc < 2:2622082/100‑1 (MQ=255)
cacaGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCg < 2:2407743/100‑1 (MQ=255)
caGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCt < 1:2158746/100‑1 (MQ=255)
aGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTc < 2:599614/100‑1 (MQ=255)
ggggCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCa > 1:2150229/1‑100 (MQ=255)
ggggCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCa > 2:3183654/1‑100 (MQ=255)
gggCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCAc > 2:3261856/1‑100 (MQ=255)
gCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCAcgc > 1:1445231/1‑100 (MQ=255)
ttccgatctAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCAcgcg < 2:1427656/92‑1 (MQ=255)
tGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGt > 2:1820160/1‑100 (MQ=255)
tGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGt > 2:2206686/1‑100 (MQ=255)
gTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCGCACGCGTg > 2:2256249/1‑100 (MQ=255)
tCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTgg > 2:1912571/1‑100 (MQ=255)
tCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTgg > 1:175535/1‑100 (MQ=255)
tCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTgg < 1:1209475/100‑1 (MQ=255)
cAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGAAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTggc > 1:721615/1‑100 (MQ=255)
aaaTAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTggcg > 1:3172497/1‑100 (MQ=255)
aaTAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTggcgg < 2:1445237/100‑1 (MQ=255)
tAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGcc > 2:716770/1‑100 (MQ=255)
tAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGcc > 1:338618/1‑100 (MQ=255)
tAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGcc < 2:2666182/100‑1 (MQ=255)
aaaCAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGcca < 1:181230/100‑1 (MQ=255)
aaaCAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCAcgcgagatcggaa > 1:1427650/1‑91 (MQ=255)
aaaCAGATTGCCTCGGTGGTGAATATTTCCGAGAAAACAGTAAACGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCAcgc > 1:3195208/1‑90 (MQ=255)
agcAGAGTGCCTCGGTGTTGAATCTTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGcc < 1:1865182/96‑1 (MQ=255)
aaCGGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTGGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGcca > 1:1167915/1‑99 (MQ=255)
aCAGATTGCCTCGGTGTTGAATCTTTCCGAGCAGACAGTAAAAGTACCTATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGccacc < 2:153640/100‑1 (MQ=255)
aCAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGccacc > 2:3158178/1‑100 (MQ=255)
cAGATTGCCTCGGTGTTGAATATTTCCGCGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGccacca > 2:398903/1‑100 (MQ=255)
gATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCAtt > 2:2913667/1‑100 (MQ=255)
aTTGCCTGGGTGTTGAATATGTCCGAGCAGACAGTAAAAGTACATATTCGGAATCGGCTGCGTAAACTCAATGTCCGCGCGCGCGGGGCGGACACCATTc < 1:2358165/100‑1 (MQ=255)
ttGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCt < 2:1170111/100‑1 (MQ=255)
gCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGt < 2:2573832/100‑1 (MQ=255)
tCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTcc < 1:849777/100‑1 (MQ=255)
tCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTcc < 2:2324104/100‑1 (MQ=255)
tCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTcc < 2:123231/100‑1 (MQ=255)
ggTGTTGATTATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGTGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTg < 1:518468/100‑1 (MQ=255)
ggTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTg < 2:1077266/100‑1 (MQ=255)
tgtTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGca < 1:2444620/100‑1 (MQ=255)
tgtTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGca < 2:2273864/100‑1 (MQ=255)
ttGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGcaac > 2:1491927/1‑100 (MQ=255)
ttGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGcaac < 2:1009319/100‑1 (MQ=255)
tggAATATTTCCGAGCAGACAGTAAATGTACATATTCGCAATCTGCTGCGTAAACTCCATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGcaac < 1:1860597/98‑1 (MQ=255)
tGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGcaaca > 1:3222638/1‑100 (MQ=255)
tGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGcaaca > 1:438493/1‑100 (MQ=255)
tGAATATTTCCGAGCAAACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGcaaca > 2:2550867/1‑100 (MQ=255)
gAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGcaacaa < 1:2565693/100‑1 (MQ=255)
atatTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAAcg > 2:3073896/1‑100 (MQ=255)
tatTTCCGAGCAGACAGTAAAAGTACATATTCACAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAAcgc > 2:102782/1‑100 (MQ=255)
tttCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCgg > 2:1877650/1‑100 (MQ=255)
tttCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCgg > 1:1147333/1‑100 (MQ=255)
tCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCgggg < 2:473119/100‑1 (MQ=255)
tCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCgggg < 2:2949922/100‑1 (MQ=255)
ccGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGc < 2:1031509/100‑1 (MQ=255)
gAGCAGACAGTAAAAGTACATATTCGCAATCTGCTTCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGcac < 2:690789/100‑1 (MQ=255)
gAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGcac > 1:831804/1‑100 (MQ=255)
aGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATa > 1:3328480/1‑100 (MQ=255)
gACAGTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATaa > 1:2420316/1‑100 (MQ=255)
gACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATaa > 1:2500819/1‑100 (MQ=255)
aCAGTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCGCAATaaa < 2:1775059/100‑1 (MQ=255)
aCAGTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCCCTCACGCGTGGCGGCCACCATTCTGTCCCTGCAACAACGCGGGGCACAATaaa < 2:2212407/100‑1 (MQ=255)
cAGTAAAAGTACATATTCGCCATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATaaaa > 1:2512648/1‑100 (MQ=255)
cAGTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATaaaa > 2:1404821/1‑100 (MQ=255)
aGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATaaaaa > 2:1134063/1‑100 (MQ=255)
gTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAAt > 2:2109874/1‑100 (MQ=255)
gTAAAAGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAAt > 1:303637/1‑100 (MQ=255)
gTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAAt > 1:2967107/1‑100 (MQ=255)
gTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAAt > 1:2814837/1‑100 (MQ=255)
gTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAAt > 2:1645588/1‑100 (MQ=255)
gTAAAAGTACATATGCGGAATCTGGTGCGTAAACTCAATGACCGCTCAGACGTGGCGGCAACACTGCTGTTAATGCAACAACGCGGGGGAGAATaaaaa > 1:1281807/1‑99 (MQ=255)
aaaGTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGc < 1:336737/100‑1 (MQ=255)
aaGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGcc < 1:2256233/100‑1 (MQ=255)
gTACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTTTTCCTACAACAACGCGGGGCACAATAAAAATAGCCCg < 1:1813119/100‑1 (MQ=255)
gTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCg < 2:2249476/100‑1 (MQ=255)
gTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCg > 2:1761206/1‑100 (MQ=255)
tACATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGa > 2:774696/1‑100 (MQ=255)
cATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATg > 2:3039815/1‑100 (MQ=255)
cATATTCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATg < 2:338619/100‑1 (MQ=255)
tatTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGa < 2:120471/100‑1 (MQ=255)
ttCGCAATCTGCTGCGTAACCTCAATGTCCGCTCACGCTTGGCGGCCACCATTCTGTTTCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGAtt < 1:1846120/100‑1 (MQ=255)
ttCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGAtt < 2:3256673/100‑1 (MQ=255)
tCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGAttt > 1:696074/1‑100 (MQ=255)
cGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTa < 2:427088/100‑1 (MQ=255)
cAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTatc < 1:469000/100‑1 (MQ=255)
ctgctgCGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCg > 1:100668/1‑100 (MQ=255)
gctgcGTAACCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCggg > 1:1503986/1‑100 (MQ=255)
gctgcGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCggg < 2:1605248/100‑1 (MQ=255)
gctgcGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCggg > 1:3181070/1‑100 (MQ=255)
ctgcGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGc < 2:457901/100‑1 (MQ=255)
ctgcGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGc > 2:2601485/1‑100 (MQ=255)
tgcGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGCt > 2:547198/1‑100 (MQ=255)
cGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGCTga < 2:2897305/100‑1 (MQ=255)
gTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGCTgag > 2:177977/1‑100 (MQ=255)
tAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGCTgaga > 1:2506656/1‑100 (MQ=255)
aCTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGCTGAGAttt > 2:189240/1‑100 (MQ=255)
|
CACGAGCTGGCACAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGCTGAGATTT > NC_000913/2290986‑2291183
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
