Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F50 I3 R1 283 58.3 1819865 98.8% 1798026 150.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,539,032 T→C C550R (TGC→CGC)  yhgF → putative transcriptional accessory protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,539,0320TC100.0% 198.3 / NA 55C550R (TGC→CGC) yhgFputative transcriptional accessory protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (21/34);  total (21/34)

CTTCTGTTCCGCTGTTAACCCGCGTGGCGGGCCTGACGCGCATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGTGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGAAAGATCTGATGGGTAACAGCAGCGAACTGCGT  >  NC_000913/3538886‑3539178
                                                                                                                                                  |                                                                                                                                                  
cTTCTGTTCCGCTGTTAACCCGCGTGGCGGGCCTGACGCGCATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCTAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAgcgc                                                                                                                                                  >  2:261405/1‑149 (MQ=255)
 ttCTGTTCCGCTGTTAACCCGCGTGGCGGGCCTGACGCGCATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGcgcgcg                                                                                                                                               >  2:226402/1‑151 (MQ=255)
     gTTCCGCTGTTAACCCGCGTGGCGGGCCTGACGCGCATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCgg                                                                                                                                              <  2:44935/148‑1 (MQ=255)
        ccGCTGTTAACCCGCGTGGCGGGCCTGACGCGCATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGcttct                                                                                                                                        <  1:265622/151‑1 (MQ=255)
                aaCCCGCGTGGCGGGCCTGACGCGCATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCAtt                                                                                                                                >  1:882424/1‑151 (MQ=255)
                 aCCCGCGTGGCGGGCCTGACGCGCATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCAtt                                                                                                                                >  2:701992/1‑150 (MQ=255)
                     gcgTGGCGGGCCTGACGCGCATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAAcc                                                                                                                            >  1:604625/1‑150 (MQ=255)
                          gCGGGCCTGACGCGCATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTg                                                                                                                      <  2:90519/151‑1 (MQ=255)
                             ggCCTGACGCGCATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGa                                                                                                                     >  1:452136/1‑149 (MQ=255)
                             ggCCTGACGCGCATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATa                                                                                                                   <  2:796877/151‑1 (MQ=255)
                                cTGACGCGCATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAAcc                                                                                                                >  1:717500/1‑151 (MQ=255)
                                  gACGCGCATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAAccc                                                                                                               <  1:706264/150‑1 (MQ=255)
                                  gACGCGCATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAAcc                                                                                                                <  2:823024/149‑1 (MQ=255)
                                    cgcgCATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCt                                                                                                            <  1:454614/151‑1 (MQ=255)
                                      cgcATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTgg                                                                                                          >  2:700001/1‑151 (MQ=255)
                                      cgcATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTgg                                                                                                          >  1:750254/1‑151 (MQ=255)
                                        cATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGa                                                                                                         <  2:312761/150‑1 (MQ=255)
                                        cATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGAc                                                                                                        >  1:866431/1‑151 (MQ=255)
                                              ggCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTc                                                                                                   <  1:530956/150‑1 (MQ=255)
                                                cgcAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTAc                                                                                                >  2:632407/1‑151 (MQ=255)
                                                    aaaCATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGtt                                                                                            >  2:313123/1‑151 (MQ=255)
                                                    aaaCATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGtt                                                                                            <  1:433739/151‑1 (MQ=255)
                                                     aaCATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTc                                                                                           <  2:308692/151‑1 (MQ=255)
                                                           gTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCgg                                                                                     >  2:772050/1‑151 (MQ=255)
                                                              gCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAg                                                                                  <  1:728510/151‑1 (MQ=255)
                                                               ccTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGc                                                                                 >  2:697802/1‑151 (MQ=255)
                                                                  ggCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCt                                                                               <  2:876427/150‑1 (MQ=255)
                                                                  ggCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTa                                                                              <  2:828615/151‑1 (MQ=255)
                                                                      cgATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCg                                                                          <  2:446217/151‑1 (MQ=255)
                                                                       gATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCg                                                                          <  2:594862/150‑1 (MQ=255)
                                                                         tGAGAACGGTCCGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCgg                                                                         <  2:9000/149‑1 (MQ=255)
                                                                          gagaACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCggtg                                                                       <  1:13549/150‑1 (MQ=255)
                                                                            gaACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCggtggt                                                                     <  2:437125/150‑1 (MQ=255)
                                                                             aaCGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGtggtgg                                                                   <  2:219267/151‑1 (MQ=255)
                                                                              aCGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGa                                                                  <  2:79664/151‑1 (MQ=255)
                                                                                ggTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAAc                                                                >  2:562537/1‑151 (MQ=255)
                                                                                     gTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCAtt                                                           >  1:568638/1‑151 (MQ=255)
                                                                                        ccAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCt                                                         <  2:810089/150‑1 (MQ=255)
                                                                                         cAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTgg                                                       >  1:496157/1‑151 (MQ=255)
                                                                                                gTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAac                                                >  2:873265/1‑151 (MQ=255)
                                                                                                   aGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAAcaca                                             <  2:560225/151‑1 (MQ=255)
                                                                                                   aGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAAcaca                                             <  1:439436/151‑1 (MQ=255)
                                                                                                               aaGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGa                                  >  1:248106/1‑150 (MQ=255)
                                                                                                                   gAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCTCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGAAAGa                              <  2:503632/150‑1 (MQ=255)
                                                                                                                    aGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGaa                                 >  1:710190/1‑146 (MQ=255)
                                                                                                                    aGCCGTCTGGGGCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGAAAGATc                            <  1:66344/151‑1 (MQ=255)
                                                                                                                            ggggCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATACCCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGAAAGATCTGATGGGt                    <  1:131966/151‑1 (MQ=255)
                                                                                                                            ggggCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGAAAGATCTGATGGGt                    <  2:125645/151‑1 (MQ=255)
                                                                                                                              ggCCGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGAAAGATCTGATGGGTaa                  <  1:872519/151‑1 (MQ=255)
                                                                                                                                ccGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGAAAGATCTGATGGGTAAca                <  1:700050/151‑1 (MQ=255)
                                                                                                                                 cGAAAGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGAAAGATCTGATGGGTAAc                 >  2:663763/1‑149 (MQ=255)
                                                                                                                                    aaGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGAAAGATCTGATGGGTAAcagcag            <  2:558164/151‑1 (MQ=255)
                                                                                                                                    aaGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGAAAGATCTGATGGGTAAcagca             <  1:741420/150‑1 (MQ=255)
                                                                                                                                    aaGCCTTCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGAAAGATCTGATGGGTAAcagc              >  2:21281/1‑149 (MQ=255)
                                                                                                                                          tCGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGAAAGATCTGATGGGTAACAGCAGCGaa        <  1:440410/149‑1 (MQ=255)
                                                                                                                                           cGAGCAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGAAAGATCTGATGGGTAACAGCAGCGAACt      <  1:313149/150‑1 (MQ=255)
                                                                                                                                               cAGCGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGAAAGATCTGATGGGTAACAGCAGCGAACTGCGt  >  2:81531/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
CTTCTGTTCCGCTGTTAACCCGCGTGGCGGGCCTGACGCGCATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGTGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGAAAGATCTGATGGGTAACAGCAGCGAACTGCGT  >  NC_000913/3538886‑3539178

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A