Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F50 I3 R1
|
105 |
107.9 |
3491495 |
95.1% |
3320411 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,551,710 |
T→C |
F125L (TTC→CTC) |
fdnI → |
formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,551,710 | 0 | T | C | 96.9%
| 316.6
/ ‑7.0
| 96 | F125L (TTC→CTC) | fdnI | formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible |
| Reads supporting (aligned to +/- strand): ref base T (3/0); new base C (50/43); total (53/43) |
| Fisher's exact test for biased strand distribution p-value = 2.50e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01 |
CATCACAACATCCCGGATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTTTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGATCCATATGTATATGGC > NC_000913/1551566‑1551855
|
cATCACAACATCCCGGATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGt > 2:824636/1‑149 (MQ=255)
cATCACAACATCCCGGATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAAAGCCGGGCAAAAGATGGTGTTCTGGGCGATCATGAGCATGGTTCTCGt > 4:162577/1‑149 (MQ=255)
aTCACAACATCCCGGATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGtgct > 1:1087334/1‑151 (MQ=255)
acaacaTCCCGGATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTgctgct < 1:1100074/151‑1 (MQ=255)
acaacaTCCCGGATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTgctgct < 2:670756/151‑1 (MQ=255)
caacaTCCCGGATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTTGTCGATCATGAGCATGATTCTCGGgctgct > 2:725585/1‑150 (MQ=255)
caacaTCCCGGATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCAGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGctgctg < 2:128317/151‑1 (MQ=255)
acaTCCCGGATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGGACAAAGCCGGGGAAAAGATTATGTTCTGGGCGATCATGAGCATGATTCTCGTGCTGCTgg > 2:766141/1‑150 (MQ=255)
caTCCCGGATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGGAAGTACAACGCCGGGCCAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGGGCTGCTGGTg > 1:406714/1‑151 (MQ=255)
tCCCGGATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGa < 2:1041256/150‑1 (MQ=255)
cGGATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCgg < 3:228708/151‑1 (MQ=255)
cGGATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCgg > 4:47051/1‑151 (MQ=255)
ggATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCggg < 2:659398/151‑1 (MQ=255)
ggATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCggg > 1:755725/1‑151 (MQ=255)
gATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCgggg < 4:20536/151‑1 (MQ=255)
aTAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCgggg > 4:400555/1‑150 (MQ=255)
aTAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGt < 3:179255/151‑1 (MQ=255)
gaaagaTATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGAtt < 1:162830/151‑1 (MQ=255)
atatTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTg > 1:166407/1‑151 (MQ=255)
atTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGc < 1:215967/151‑1 (MQ=255)
ttCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGGACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGGGACCGGGGGGATTATCTGGCg > 2:61876/1‑151 (MQ=255)
accGTGGATGTTGAACATTGTCGAAGTATTGAAAGGCCATGAGCATAAAGTGGCGGATGGCGGCGCGGACAACGACGGGCGAAAAATCATCTTCTTGTTGATCTTAAACACGATTCTCTTGCTCTTGGTGACCGGGGTGGTTTTCTgg > 2:739943/2‑148 (MQ=255)
ccGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGGTGTCGGTAAGGACAAAGCCGGGCAAAAGATGATGTTCTGGTCGATTATGAGCATGAATCTCGGGCTGCTGGGGACCGGGGGGATTATTTGGCg > 2:166587/1‑149 (MQ=255)
tGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGGGGTCGGTATGGGTAACCCCGGGCAAAAAGTGAAGTTTTGGTCGATACTCAGCCTGGTTCTCGTGCGGTTGGTGACCGGGGTGGTTATTTGGCGTcc > 2:1103015/1‑149 (MQ=255)
ggCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGt < 4:77571/150‑1 (MQ=255)
ggCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTa < 1:1247705/151‑1 (MQ=255)
ggCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTATGGTCGAACCAGAGAATGATTTTCGAGCTGCTCGTGACCGGGGTGATTATCTGGCGTCCg > 1:954286/1‑149 (MQ=255)
gCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTAc > 1:422618/1‑151 (MQ=255)
gCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATAAATCTCGTGCTGCTGGGGACCGGGGAGATTATCTGGCGTCCg > 1:189034/1‑148 (MQ=255)
gTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACtt < 4:16228/150‑1 (MQ=255)
gTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTCGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGCCCGGGGTGATTCTCTAGCGTCCGTACt < 2:498482/149‑1 (MQ=255)
gTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGGAAGTAAAACGCCCGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGGGCTGCTGGTGACCGGGGTGGTTATCTGGCGTCCGTAc > 2:46208/1‑148 (MQ=255)
ttGAACATTGTCGAAGTATTGAAAGGAAATGAGCATAAAGTGGCGGATGCCGGTAAGTACAATGCCGGGGAAAAAATGAAGATCTGGGCGATCATTAGCATGATTTTCGAGCTGATGGTGACCGGGGTGATTATCTGGTGTCCGTACttt > 4:185945/1‑150 (MQ=255)
aaCATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTgcgc > 1:471455/1‑151 (MQ=255)
aaCATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTgcgc < 1:876196/151‑1 (MQ=255)
aCATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGGAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGGGATTATCTGGCGTCCGTACTTTgcgc > 2:1108098/1‑150 (MQ=255)
tCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGGCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACtt > 1:188719/1‑151 (MQ=255)
tCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGACGGTAAGAAAAAAGCCGGGCAAAAGATGATGTTACGGTCGGTCATGAGCATGATTTTCGTGCTGCCGGTGACCGGGGTGATTATTTGGCGTCCGTAATTTGCGCAGTACtt > 2:123770/1‑151 (MQ=255)
aGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGGGATTATCTGGCGTCCGTACTTTGCGCAGTACTTccc > 2:826821/1‑150 (MQ=255)
gTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTccc > 2:105468/1‑149 (MQ=255)
gTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGGGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCg > 3:411013/1‑150 (MQ=255)
aTTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGAt < 4:255558/150‑1 (MQ=255)
aTTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATg > 4:399090/1‑151 (MQ=255)
aTTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGACGGGCAAAAGGTGATGGTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGGGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGAt > 2:730166/1‑150 (MQ=255)
aGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGgtt < 2:1057814/151‑1 (MQ=255)
aaTGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATTAGCATGATTCTCGTGCTGCTGGTGACCGGGGGGATTATCTGGCGTCCGGACTTTGCGCAGTAATTCCCGATGGCGgttgtt > 3:386237/1‑150 (MQ=255)
aaTGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTc < 2:226064/151‑1 (MQ=255)
aTGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCg < 2:331269/151‑1 (MQ=255)
aTGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGGCGATCATGAGCATGATTCTCGGGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGgttgtt > 3:176161/1‑149 (MQ=255)
tGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGGGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCg > 1:602293/1‑150 (MQ=255)
tAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACa > 2:715766/1‑149 (MQ=255)
aaGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCct < 1:655060/151‑1 (MQ=255)
ggCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGTATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCctgct > 1:58077/1‑150 (MQ=255)
gATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGGTcc < 2:1121469/151‑1 (MQ=255)
gTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCAcg < 1:653364/151‑1 (MQ=255)
cGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCAcgc < 3:427881/150‑1 (MQ=255)
cGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCAcgc < 1:1181404/150‑1 (MQ=255)
ggTAAGGACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGGGACCGGGGGGATTATCTGGCGTCCGTACTTTGCGCAGGACTTTCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCgg > 3:432978/1‑151 (MQ=255)
gTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGc < 3:2615/151‑1 (MQ=255)
gTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGc > 4:265443/1‑151 (MQ=255)
tAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCt > 1:149971/1‑151 (MQ=255)
aaGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTg > 2:1115260/1‑151 (MQ=255)
gTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCg < 4:8718/151‑1 (MQ=255)
aCGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTat < 1:833380/151‑1 (MQ=255)
aCGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTat > 4:448343/1‑151 (MQ=255)
cGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTatc > 1:97070/1‑151 (MQ=255)
gCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTatc > 2:776667/1‑150 (MQ=255)
gCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTatc > 1:614554/1‑150 (MQ=255)
cGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTatcatc > 1:1135832/1‑151 (MQ=255)
ggCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCt < 2:774832/151‑1 (MQ=255)
aaaaGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGAt < 4:27676/151‑1 (MQ=255)
aaaaGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGAt > 4:334181/1‑151 (MQ=255)
aaaGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATc < 2:1036270/151‑1 (MQ=255)
aaGATGATGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATcc > 4:359800/1‑151 (MQ=255)
gatgatGTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGGGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCAc > 1:1019205/1‑151 (MQ=255)
gatgTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGcc > 2:192900/1‑151 (MQ=255)
atgTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGcc > 4:252482/1‑150 (MQ=255)
atgTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGcc > 4:249281/1‑150 (MQ=255)
gTTCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATc > 1:610788/1‑151 (MQ=255)
tCTGGTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCt > 4:22230/1‑151 (MQ=255)
ggTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTg < 2:1110918/149‑1 (MQ=255)
ggTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGa < 3:173155/150‑1 (MQ=255)
ggTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGa < 1:381408/150‑1 (MQ=255)
ggTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGa < 4:325985/150‑1 (MQ=255)
ggTCGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGa < 2:591767/150‑1 (MQ=255)
cGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGATcc > 3:348881/1‑150 (MQ=255)
cGATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGATCCa < 1:544729/151‑1 (MQ=255)
gATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGATCCat < 1:753297/151‑1 (MQ=255)
gATCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGATCCat > 1:1109363/1‑151 (MQ=255)
aTCATGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGATCCata < 4:137161/151‑1 (MQ=255)
aTGAGCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGATCCATATGt < 4:34787/151‑1 (MQ=255)
gCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGATCCATATGTatat > 4:309814/1‑151 (MQ=255)
gCATGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGATCCATATGTatat < 3:22230/151‑1 (MQ=255)
cATGATTCTCGTGCTGCTGGTGACCGGGGTGGTTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGATCCATATGTATATg < 3:131762/151‑1 (MQ=255)
aTGATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGATCCATATGTATATgg < 2:226002/151‑1 (MQ=255)
gATTCTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGATCCATATGTATATGGc < 2:166383/150‑1 (MQ=255)
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CATCACAACATCCCGGATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTTTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGATCCATATGTATATGGC > NC_000913/1551566‑1551855
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
