Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F50 I3 R1
|
105 |
107.9 |
3491495 |
95.1% |
3320411 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,626,022 |
A→G |
A453A (GCT→GCC) |
dcp ← |
dipeptidyl carboxypeptidase II |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,626,022 | 0 | A | G | 99.0%
| 339.3
/ ‑4.6
| 96 | A453A (GCT→GCC) | dcp | dipeptidyl carboxypeptidase II |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (38/57); total (38/58) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 |
CGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCAGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCGAAGAAATCACCGTAAAATAACGCCAGCCCCACGC > NC_000913/1625875‑1626167
|
cGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGgcggcg > 1:870296/1‑151 (MQ=255)
cGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGgcggcg < 2:1056774/151‑1 (MQ=255)
gACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACcggcggcgg > 4:455309/1‑151 (MQ=255)
cGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGt > 4:63761/1‑151 (MQ=255)
cGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGt < 4:129174/151‑1 (MQ=255)
ggAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCggggt > 1:723721/1‑149 (MQ=255)
gAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACATCGCAGGCTCACCGGCGGCGGGttt < 2:1181540/151‑1 (MQ=255)
gAAATTCGACAAAATCACGCGGCGTGTTGGGGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGCGCAGCGTATGACCAAATTCATGGACTAAGGTTAAGACATCATCCCAGAGGAACAACGCAGGCTCACCGGCGGCggg > 2:841305/1‑148 (MQ=255)
aaaTTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTc < 1:733018/151‑1 (MQ=255)
ttCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCCTATCGCTGGCGGGCAAAAATGCCGTGCAGCGTATGCCCAAATTCATGGAATAAGGTTATGAGATCATCCCAGCGTAACAACGCAGGCTCCCCGGCAGAGTGTTTCtt < 3:357678/150‑2 (MQ=255)
tCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTg > 2:327355/1‑149 (MQ=255)
tCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGa < 1:288849/150‑1 (MQ=255)
cGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCt > 1:750188/1‑147 (MQ=255)
aCAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATaa > 4:58920/1‑150 (MQ=255)
cAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCGTGGAATAAGGTTATGACATCATCCCAGAGTAACAAAGCAGGCTCACCGGCGGCGGGGTTCTGATaa > 1:175070/1‑149 (MQ=255)
cAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAAtt < 3:459769/151‑1 (MQ=255)
aaaaTCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTg > 4:15488/1‑151 (MQ=255)
aaaaTCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTg < 2:3467/151‑1 (MQ=255)
aaaaTCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGGTTCTGATAAtt > 2:107334/1‑150 (MQ=255)
aaaaTCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAAGTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGGGGGTTTCTGAt > 2:21987/1‑146 (MQ=255)
aTCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGc > 4:253844/1‑149 (MQ=255)
aTCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAg < 3:151384/151‑1 (MQ=255)
cACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGa > 1:756527/1‑150 (MQ=255)
cACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGAc > 2:735653/1‑151 (MQ=255)
cACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGAc < 2:282421/151‑1 (MQ=255)
cACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGAc > 1:832078/1‑151 (MQ=255)
cACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGAc < 2:326227/151‑1 (MQ=255)
aCGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACg < 2:965184/151‑1 (MQ=255)
gcggcgTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGtt > 2:1113011/1‑151 (MQ=255)
ggcgTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTtat < 2:1184163/151‑1 (MQ=255)
ggcgTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTtat > 3:255281/1‑151 (MQ=255)
cgTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTtata > 4:448686/1‑150 (MQ=255)
cgTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATaa < 2:458794/151‑1 (MQ=255)
cgTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATaa < 1:108564/151‑1 (MQ=255)
tGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTa < 4:196283/150‑1 (MQ=255)
gTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCg < 4:172268/151‑1 (MQ=255)
gCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCgg > 1:306492/1‑150 (MQ=255)
ggAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGAtgt < 2:847449/151‑1 (MQ=255)
ggAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGAtg > 1:844809/1‑150 (MQ=255)
aaGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGtt < 2:1214580/151‑1 (MQ=255)
cGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGtttt > 2:642157/1‑150 (MQ=255)
gTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTttat < 2:564438/151‑1 (MQ=255)
ggCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTttatt < 2:71266/150‑1 (MQ=255)
tAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGGTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGGTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGGTTTATTAAGCg > 2:174235/1‑151 (MQ=255)
aaCGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCg < 2:486806/150‑1 (MQ=255)
aCGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGtt < 1:1216242/151‑1 (MQ=255)
aCGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGtt < 3:274918/151‑1 (MQ=255)
gCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGa < 3:81948/151‑1 (MQ=255)
ggCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGAtt < 2:645869/150‑1 (MQ=255)
ggCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGAt < 1:417314/149‑1 (MQ=255)
ggCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGCAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGAt < 3:337900/149‑1 (MQ=255)
gCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGAtt < 3:351199/149‑1 (MQ=255)
gCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTg > 3:58603/1‑150 (MQ=255)
gCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGc > 3:210222/1‑151 (MQ=255)
gggCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTc < 2:157941/151‑1 (MQ=255)
cAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTcaac < 2:658320/151‑1 (MQ=255)
aaaaaGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTcaaca < 4:77371/151‑1 (MQ=255)
aaaaaGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTcaac > 3:392628/1‑150 (MQ=255)
aaaGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACaaa < 1:1016133/151‑1 (MQ=255)
aGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAAt > 4:59569/1‑151 (MQ=255)
ccGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGc < 1:107350/151‑1 (MQ=255)
gTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGccc > 1:428100/1‑151 (MQ=255)
gCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCcca < 1:622455/150‑1 (MQ=255)
cGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCccatccat < 1:1125574/151‑1 (MQ=255)
cGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCccatccat < 1:916592/151‑1 (MQ=255)
gTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATg < 1:225117/151‑1 (MQ=255)
tATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGGTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGc > 2:40227/1‑151 (MQ=255)
aCCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGGAACAACGCAGGCTCACCGGCGGCGGGATTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCAccg > 1:1012173/1‑151 (MQ=255)
cAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCAccgcc < 1:296706/151‑1 (MQ=255)
ttCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGAAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCTTGCACCGCCGCtt > 3:39645/1‑151 (MQ=255)
cATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCtttt < 1:560669/151‑1 (MQ=255)
aTGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCttttt < 1:261065/151‑1 (MQ=255)
tGGAATAAGTTTATGACATCATCCCAGAGTACCAACGCAGGCTCCCCGGCGGCGGGTTTCTGATAATTGCAAACGTTATAAATTCCCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCAGGCACCGCCGCttttt < 2:175047/150‑1 (MQ=255)
ggTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGTGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTAAACAAAATTGCCCACCCATGCACCGCCGCTTTTTGAATCACgg < 1:847625/151‑1 (MQ=255)
ggTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACgg < 3:408171/151‑1 (MQ=255)
gTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACggg > 4:222535/1‑151 (MQ=255)
gTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACggg > 2:731599/1‑151 (MQ=255)
ttATGACTTCATCCCAGAGTAACACCGCAGGCTCCCGGGCGTCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTTTTTTATTAAGCGTTGATTCCTCAAAAAAATTCCCCACCCGGGCACCGCCGCTTTTTGAATc < 2:65255/145‑1 (MQ=255)
tATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGc < 3:162510/150‑1 (MQ=255)
aTGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGCCGTTATAAATTCCCGGATGTGTTTTATAAGGCGTTGATCGCTAACCAAAATTGCCCACCCATGCTCCGCCGCTTTTTGAATCTCGGGCga < 2:65155/151‑1 (MQ=255)
gACATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCgaag < 4:48355/151‑1 (MQ=255)
aCATCATCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCga > 2:1142138/1‑148 (MQ=255)
catcatCCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCgaagaa < 1:549955/151‑1 (MQ=255)
catcCCAGAGTAACAACGCAGGCTCACCGGCGGGGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCGAAGAAAt < 1:701819/150‑1 (MQ=255)
atcCCAGAGTAGCAACGCAGGCTCACGGGGGGCGGGTTTCTGATAATTGCAGACGTTATAAATTCCCGGATGTGTTTTATTAAGCGTAGTTTGCTCAAGAAAATTGCCTATCCATGCACCGCCGGTTTTTGAATCACGGGCGAAGAAATc < 1:841474/150‑1 (MQ=255)
atcCCAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGAAAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCACCCATGCACCGCCGCTTTTTGAATCACGGGCgaagaa < 2:347261/147‑1 (MQ=255)
ccAGAGTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCGAAGAAATCACCg > 3:378814/1‑151 (MQ=255)
cAGAGTAACAACGCAGGCTCACCGGCGGCGGTTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCGAAGAAATCACCGt < 2:1087348/151‑1 (MQ=255)
agagTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCGAAGAAATCACCGt > 2:733167/1‑150 (MQ=255)
agTAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCGAAGAAATCACCGTaaa < 4:273671/151‑1 (MQ=255)
tAACAACGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCGAAGAAATCACCGTaaaa > 1:855049/1‑150 (MQ=255)
aacaacGCAGGCTCCCCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCGAAGAAATCACCGTAAAATa < 2:468750/151‑1 (MQ=255)
aacaacGCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCGAAGAAATCACCGTAAAATa < 1:774506/151‑1 (MQ=255)
gCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCGAAGAAATCACCGTAAAATAACGCCa < 1:165259/151‑1 (MQ=255)
gCAGGCTCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCGAAGAAATCACCGTAAAATAACGCCa < 3:408699/151‑1 (MQ=255)
tCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCGAAGAAATCACCGTAAAATAACGCCAGcccc > 1:319816/1‑150 (MQ=255)
tCACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCGAAGAAATCACCGTAAAATAACGCCAGcccc > 1:712705/1‑150 (MQ=255)
cACCGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCGAAGAAATCACCGTAAAATAACGCCAGCCCCa < 2:844639/150‑1 (MQ=255)
ccGGCGGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCGAAGAAATCACCGTAAAATAACGCCAGCCCCACGc > 1:50180/1‑151 (MQ=255)
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CGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGCATAACGCTGGCGGGCAAAAAGGCCGTGCAGCGTATGACCAAATTCATGGAATAAGGTTATGACATCATCCCAGAGTAACAACGCAGGCTCACCGGCAGCGGGTTTCTGATAATTGCAGACGTTATAAATTACCGGATGTGTTTTATTAAGCGTTGATTGCTCAACAAAATTGCCCATCCATGCACCGCCGCTTTTTGAATCACGGGCGAAGAAATCACCGTAAAATAACGCCAGCCCCACGC > NC_000913/1625875‑1626167
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
