Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F50 I2 R1 150 68.2 2132745 98.7% 2105019 150.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,400,721 A→G F351F (TTT→TTC)  abgT ← p‑aminobenzoyl‑glutamate transporter; membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,400,7210AG100.0% 241.3 / NA 65F351F (TTT→TTC) abgTp‑aminobenzoyl‑glutamate transporter; membrane protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (29/36);  total (29/36)

CATGCATAAGAAAGAGGAAAGCAACGCCAGACCGACAAACGCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGAAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGACAACAAAGAAAAAAAGAATGATCAGTGGCACGATACCT  >  NC_000913/1400574‑1400868
                                                                                                                                                   |                                                                                                                                                   
cATGCATAAGAAAGAGGAAAGCAACGCCAGACCGACAAACGCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGgaa                                                                                                                                                   >  1:770660/1‑150 (MQ=255)
 aTGCATAAGAAAGAGGAAAGCAACGCCAGACCGACAAACGCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGgaaa                                                                                                                                                  >  2:771268/1‑150 (MQ=255)
              agGAAAGCAACGCCAGACCGACAAACGCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATaa                                                                                                                                     >  1:566443/1‑150 (MQ=255)
                 aaaGCAACGCCAGACCGACAAACGCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATcc                                                                                                                                 >  1:742115/1‑151 (MQ=255)
                      aaCGCCAGACCGACAAACGCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGc                                                                                                                              >  2:998422/1‑149 (MQ=255)
                      aaCGCCAGACCGACAAACGCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCa                                                                                                                            <  2:537974/151‑1 (MQ=255)
                              aCCGACAAACGCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTc                                                                                                                    <  1:1023255/151‑1 (MQ=255)
                              aCCGACAAACGCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTc                                                                                                                    <  1:268427/151‑1 (MQ=255)
                                cGACAAACGCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCAt                                                                                                                  >  2:152258/1‑151 (MQ=255)
                                agACAAACGCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCAt                                                                                                                  >  2:294728/2‑151 (MQ=255)
                                   cAAACGCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCgg                                                                                                               <  1:351208/151‑1 (MQ=255)
                                    aaaCGCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCgg                                                                                                               >  1:72023/1‑150 (MQ=255)
                                     aaCGCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGtt                                                                                                             >  1:784703/1‑151 (MQ=255)
                                     aaCGCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGtt                                                                                                             <  1:668437/151‑1 (MQ=255)
                                       cGCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGtt                                                                                                             >  1:898371/1‑149 (MQ=255)
                                       cGCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCa                                                                                                           <  2:1006616/151‑1 (MQ=255)
                                        gCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCaa                                                                                                          <  2:391648/151‑1 (MQ=255)
                                         ccGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAAt                                                                                                         >  1:387505/1‑151 (MQ=255)
                                           gggATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCa                                                                                                       <  1:431526/151‑1 (MQ=255)
                                                 ccGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAAt                                                                                                 >  1:898358/1‑151 (MQ=255)
                                                 ccGCTAAGCCCTGAACTTTCCAGTAGATCGGTCAGCCCCACGGCGATGAATTTCCGCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTaaa                                                                                                  >  2:419914/1‑150 (MQ=255)
                                                   gatAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGATCAATCATTAAATGc                                                                                               >  2:845518/3‑151 (MQ=255)
                                                          ccTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAAt                                                                                        <  1:797053/151‑1 (MQ=255)
                                                            tGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATcc                                                                                      >  2:18718/1‑151 (MQ=255)
                                                             gAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCg                                                                                     <  2:604284/151‑1 (MQ=255)
                                                                  ttCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTg                                                                                 >  1:811871/1‑150 (MQ=255)
                                                                  ttCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTg                                                                                 >  1:541295/1‑150 (MQ=255)
                                                                    ccAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACg                                                                              >  1:894315/1‑151 (MQ=255)
                                                                      aGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTc                                                                            <  1:355926/151‑1 (MQ=255)
                                                                                  aGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCggg                                                                <  2:252738/151‑1 (MQ=255)
                                                                                    ccccACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTa                                                              <  1:436520/151‑1 (MQ=255)
                                                                                     accACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGt                                                               >  2:842030/2‑149 (MQ=255)
                                                                                      ccACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGTTAGc                                                            <  2:591802/151‑1 (MQ=255)
                                                                                      ccACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGc                                                            >  2:82976/1‑151 (MQ=255)
                                                                                       cACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCg                                                           <  2:236348/151‑1 (MQ=255)
                                                                                       cACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCg                                                           >  2:794256/1‑151 (MQ=255)
                                                                                            cGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGcc                                                      <  1:360285/151‑1 (MQ=255)
                                                                                            cGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGcc                                                      >  1:672937/1‑151 (MQ=255)
                                                                                            cGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGcc                                                      <  1:271009/151‑1 (MQ=255)
                                                                                              aTGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCAt                                                    >  2:542641/1‑151 (MQ=255)
                                                                                                      ccccATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAg                                             <  1:893523/150‑1 (MQ=255)
                                                                                                       cccATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAg                                             <  1:488472/149‑1 (MQ=255)
                                                                                                        ccATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCga                                          <  2:403908/151‑1 (MQ=255)
                                                                                                        ccATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCg                                           >  2:693766/1‑150 (MQ=255)
                                                                                                         cATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCgag                                         <  2:981729/151‑1 (MQ=255)
                                                                                                          aTGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCg                                           >  2:246606/1‑148 (MQ=255)
                                                                                                            gTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGaca                                      <  1:22959/151‑1 (MQ=255)
                                                                                                            gTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGac                                       <  1:357905/150‑1 (MQ=255)
                                                                                                             ttGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGaca                                      >  1:704672/1‑150 (MQ=255)
                                                                                                              tGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGacaa                                     <  2:361769/150‑1 (MQ=255)
                                                                                                                 tCCAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGAcaacaa                                  >  1:203775/1‑150 (MQ=255)
                                                                                                                  ccAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGAcaacaa                                  <  1:267151/149‑1 (MQ=255)
                                                                                                                  ccAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGACAACaaa                                 <  2:478123/150‑1 (MQ=255)
                                                                                                                  ccAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGACAACAAAg                                <  2:961424/151‑1 (MQ=255)
                                                                                                                   cAGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGACAACAAAGa                               <  1:394243/151‑1 (MQ=255)
                                                                                                                    aGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGACAACAAAGaa                              <  1:678287/151‑1 (MQ=255)
                                                                                                                    aGTTAAACATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGACAACAAAGa                               >  1:526862/1‑150 (MQ=255)
                                                                                                                        aaaCATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGACAACAAAGaaaaa                           >  2:943987/1‑150 (MQ=255)
                                                                                                                           cATGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGACAACAAAGAAAAAAAGa                       <  1:414420/151‑1 (MQ=255)
                                                                                                                             tGGCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGACAACAAAGAAAAAAAGAAt                     >  2:1001974/1‑151 (MQ=255)
                                                                                                                               gCGACAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGACAACAAAGAAAAAAAGAATGa                   <  1:617838/151‑1 (MQ=255)
                                                                                                                                  aCAAATTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGACAACAAAGAAAAAAAGAATGATCa                <  2:818015/151‑1 (MQ=255)
                                                                                                                                    aaaTTGGGCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGACAACAAAGAAAAAAAGAATGATCAGt              >  1:27186/1‑151 (MQ=255)
                                                                                                                                         gggCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGACAACAAAGAAAAAAAGAATGATCAGTGGCa          <  1:700152/150‑1 (MQ=255)
                                                                                                                                          ggCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGACAACAAAGAAAAAAAGAATGATCAGTGGCACg        <  1:120330/151‑1 (MQ=255)
                                                                                                                                           gCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGACAACAAAGAAAAAAAGAATGATCAGTGGCACGa       <  2:823051/151‑1 (MQ=255)
                                                                                                                                           gCGAGGGGGAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGACAACAAAGAAAAAAAGAATGATCAGTGGCACGa       <  2:438952/151‑1 (MQ=255)
                                                                                                                                                ggggAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGACAACAAAGAAAAAAAGAATGATCAGTGGCACGATACCt  >  1:364703/1‑151 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CATGCATAAGAAAGAGGAAAGCAACGCCAGACCGACAAACGCCGGGATGCCGCTAAGCCCTGAACTTTCCAGTATATCGGTCAGCCCCACGGCGATGAATTTCCCCATGTTGCTCCAGTTAAACATGGCGACAAATTGGGCGAGGGGAAAAACCATCACGATAAATCCCGCCATCTCTTTCATCGGTTCAATCATTAAATGCGGTAAATCCGCCTGACGTCGAATTGTGCGGGTAGCGATGCCATAAGCCAGCGAGACAACAAAGAAAAAAAGAATGATCAGTGGCACGATACCT  >  NC_000913/1400574‑1400868

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A