Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F50 I2 R1
|
150 |
68.2 |
2132745 |
98.7% |
2105019 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,686,077 |
A→G |
L171P (CTG→CCG) |
fumC ← |
fumarate hydratase (fumarase C),aerobic Class II |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,686,077 | 0 | A | G | 98.6%
| 273.8
/ NA
| 73 | L171P (CTG→CCG) | fumC | fumarate hydratase (fumarase C),aerobic Class II |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (33/39); minor base C (1/0); total (34/39) |
| Fisher's exact test for biased strand distribution p-value = 4.66e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CAGGCTGTATTCGATATGTTTGAGATTATGCTCGAGCATCGCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCAGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCACGTCGTCGTTAGGGTGAACTTTACGTTCCATCCCG > NC_000913/1685932‑1686223
|
caggcTGTATTCGATATGTTTGAGATTATGCTCGAGCATCGCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCCTCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGgtgt > 2:19108/1‑150 (MQ=255)
ggcTGTATTCGATATGTTTGAGATTATGCTCGAGCATCGCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCtg < 2:62488/151‑1 (MQ=255)
tATTCGATATGTTTGAGATTATGCTCGAGCATCGCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGGTTTCTCATTCGGTGTCTGTGTc > 2:316833/1‑150 (MQ=255)
tatGTTTGAGATTATGCTCGAGCATCGCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGtttt > 2:905984/1‑151 (MQ=255)
atGTTTGAGATTATGCTCGAGCATCGCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGGGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTTAGGGgttt > 2:432784/1‑150 (MQ=255)
ttGAGATTATGCTCGAGCATCGCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGc < 2:18036/150‑1 (MQ=255)
ttGAGATTATGCTCGAGCATCGCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCt > 1:470891/1‑151 (MQ=255)
tGAGATTATGCTCGAGCATCGCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTg > 1:781444/1‑151 (MQ=255)
agaTTATGCTCGAGCATCGCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTg > 2:958020/1‑149 (MQ=255)
aTGCTCGAGCATCGCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAAt < 2:421628/150‑1 (MQ=255)
gCTCGAGCATCGCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGACGTGGCAACCTGCAAGTGAGTACAACCAACTTTGACGATATCGGGAAAAAATCGGGGTATCTCATTGCACGTCCTGGTCTGGGTTTTAAGCTTAAGAATg > 2:1000181/1‑149 (MQ=255)
cGAGCATCGCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGtt < 1:797158/150‑1 (MQ=255)
cGAGCATCGCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGt < 1:523807/149‑1 (MQ=255)
gAGCATCGCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGttgc < 2:445412/151‑1 (MQ=255)
aTCGCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGttgcttgc > 2:687669/1‑151 (MQ=255)
gCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTgcgc > 2:655369/1‑150 (MQ=255)
gCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCa < 1:874149/151‑1 (MQ=255)
gCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCa < 2:964951/151‑1 (MQ=255)
cTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTgcgc > 2:636222/1‑149 (MQ=255)
tACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAgc > 2:850864/1‑151 (MQ=255)
aCCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAgc < 2:795960/150‑1 (MQ=255)
ccAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGcc < 1:883415/151‑1 (MQ=255)
cGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCcagcag < 1:150760/151‑1 (MQ=255)
ggAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCagcagc < 2:930970/151‑1 (MQ=255)
aTCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGGTTTAAGCTGAGGGATGAGTTGCTTGCGCAGCGCCAGCAGcgcc > 1:600683/1‑150 (MQ=255)
tctcCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGATGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGcgccgc > 2:478625/1‑151 (MQ=255)
ccTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAAc < 1:131030/151‑1 (MQ=255)
ccTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTCGCTTGCGCAGCGCCAGCAGCGCCGCAAc < 1:430917/151‑1 (MQ=255)
gCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACg < 1:18881/149‑1 (MQ=255)
gCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTg < 2:38707/151‑1 (MQ=255)
cccAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCa < 1:819463/151‑1 (MQ=255)
ccAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCAt < 2:28183/151‑1 (MQ=255)
aGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCg < 1:1066312/151‑1 (MQ=255)
cGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATGTCCGCCAAACCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTGTTAAGCTGAGGAATGAGTTGCTTGCGCAAAGCCAGCTGCGCCGGCACGTGCATcccc > 2:992956/1‑151 (MQ=255)
aaCGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCg < 2:726164/151‑1 (MQ=255)
gTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGa < 2:418689/151‑1 (MQ=255)
gTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGa < 1:1044557/151‑1 (MQ=255)
ggCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACa < 1:811756/151‑1 (MQ=255)
cATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATc > 2:883937/1‑151 (MQ=255)
aTCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCg < 1:848115/151‑1 (MQ=255)
ccTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGtt < 2:459445/151‑1 (MQ=255)
tGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTgg > 2:249418/1‑151 (MQ=255)
gCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTgg < 1:642337/150‑1 (MQ=255)
cAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGtttg < 2:130385/149‑3 (MQ=255)
cAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGa > 2:645646/1‑150 (MQ=255)
aGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACt > 2:986154/1‑151 (MQ=255)
gTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACtt < 1:684803/151‑1 (MQ=255)
tGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACttt > 1:513208/1‑151 (MQ=255)
gAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTg < 1:1031298/151‑1 (MQ=255)
aGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTgg > 1:22723/1‑151 (MQ=255)
gTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGc < 1:527440/151‑1 (MQ=255)
tACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCt > 2:545666/1‑151 (MQ=255)
aCGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCt < 1:659117/150‑1 (MQ=255)
ttttGACGATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCAc > 1:65019/1‑151 (MQ=255)
aCGATATCGGCAAAAGCACGGGGTTTCTCATTCGGTGTCTGTGTCAGGGGTTTAAGCTGAGGAATGAGTTGCTTGCGAAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCAcgtcgt > 2:519905/1‑151 (MQ=255)
gATATCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCAcgtcgtc > 2:971339/1‑150 (MQ=255)
atatCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCAcgtcgtcgt < 1:38874/151‑1 (MQ=255)
atatCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCAcgtcgtcgt > 1:340003/1‑151 (MQ=255)
atCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCACGTCGTCGTTa < 2:474336/151‑1 (MQ=255)
tCGGCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCACGTCGTCGtt > 1:689860/1‑149 (MQ=255)
gCAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCACGTCGTCGTTAGGGt < 1:1010531/151‑1 (MQ=255)
cAAAAGCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCACGTCGTCGTTAGGGTg > 2:855197/1‑151 (MQ=255)
gCACGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCACGTCGTCGTTAGGGTGAACtt < 1:252558/151‑1 (MQ=255)
cGGGATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCACGTCGTCGTTAGGGTGAACTTTAc < 1:791492/151‑1 (MQ=255)
cGGGATTTCTCATTCGGTGTCTGTGTAAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGATAGACATCGTTGGAACTTTGGCTTTTGTTCACGTCGTCGTTAGGGTGAACTTTa > 2:408506/1‑150 (MQ=255)
ggATTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCACGTCGTCGTTAGGGTGAACTTTACGt > 2:737596/1‑151 (MQ=255)
aTTTCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCACGTCGTCGTTAGGGTGAACTTTACGTTc < 1:520256/151‑1 (MQ=255)
ttCTCATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCACGTCGTCGTTAGGGTGAACTTTACGTTcc < 2:190938/150‑1 (MQ=255)
tctcATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCACGTCGTCGTTAGGGTGAACTTTACGTTCCa < 2:493739/150‑1 (MQ=255)
tctcATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCACGTCGTCGTTAGGGTGAACTTTACGTTCCAt > 1:363688/1‑151 (MQ=255)
cATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCACGTCGTCGTTAGGGTGAACTTTACGTTCCATccc > 2:946492/1‑151 (MQ=255)
cATTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCACGTCGTCGTTAGGGTGAACTTTACGTTCCATccc > 1:414150/1‑151 (MQ=255)
aTTCGGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCACGTCGTCGTTAGGGTGAACTTTACGTTCCATCCcg > 1:379763/1‑151 (MQ=255)
|
CAGGCTGTATTCGATATGTTTGAGATTATGCTCGAGCATCGCTACCCAGCCGGAAATCTCCTGCCCCAGCGTTAACGGCGTGGCATCCTGCAAGTGAGTACGACCAATTTTGACGATATCGGCAAAAGCACGGGATTTCTCATTCAGTGTCTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGGAAAGACATCGTTGGAACTTTGGCTTTTGTTCACGTCGTCGTTAGGGTGAACTTTACGTTCCATCCCG > NC_000913/1685932‑1686223
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
