Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F50 I2 R1
|
150 |
68.2 |
2132745 |
98.7% |
2105019 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,843,898 |
T→C |
Y325C (TAC→TGC) |
ynjI ← |
inner membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,843,898 | 0 | T | C | 98.4%
| 238.2
/ ‑3.7
| 64 | Y325C (TAC→TGC) | ynjI | inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (40/22); total (40/24) |
| Fisher's exact test for biased strand distribution p-value = 3.65e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 |
ACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTATTTTTTTGATAATCTTCTTCGCTTTCGAACAACTCGTGCG > NC_000913/1843752‑1844045
|
aCAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTg > 1:1058988/1‑151 (MQ=255)
caATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACt < 1:710265/151‑1 (MQ=255)
caATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACt > 1:88423/1‑151 (MQ=255)
aaTTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTg > 1:920364/1‑151 (MQ=255)
cATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTg > 2:243443/1‑151 (MQ=255)
tGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCg > 2:26977/1‑151 (MQ=255)
tGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCg > 2:399815/1‑151 (MQ=255)
aGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTaa < 2:873905/151‑1 (MQ=255)
aGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTa > 1:276604/1‑150 (MQ=255)
aGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTa > 2:656232/1‑150 (MQ=255)
gCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATa > 1:201720/1‑150 (MQ=255)
tAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACg > 1:782519/1‑151 (MQ=255)
tGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCtt > 1:477875/1‑151 (MQ=255)
gTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTc < 2:276594/151‑1 (MQ=255)
tAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTc > 2:874550/1‑150 (MQ=255)
cGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTc > 1:1065704/1‑151 (MQ=255)
ggCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTc > 1:418265/1‑149 (MQ=255)
gCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGc > 1:1057919/1‑151 (MQ=255)
aaGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCAt > 2:163783/1‑151 (MQ=255)
aaGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCAt > 2:395880/1‑151 (MQ=255)
cagcgcCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGtt < 1:199947/151‑1 (MQ=255)
cagcgcCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGtt > 1:263371/1‑151 (MQ=255)
ggCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGc < 2:925190/151‑1 (MQ=255)
cAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCg > 2:305003/1‑150 (MQ=255)
aaaTTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGAt > 2:473718/1‑150 (MQ=255)
ttCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATagc > 2:717183/1‑149 (MQ=255)
ggCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGa < 1:563120/151‑1 (MQ=255)
gCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATagcagc > 1:922679/1‑147 (MQ=255)
gCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGat < 1:115164/151‑1 (MQ=255)
gTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGatat < 2:769767/151‑1 (MQ=255)
ttATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGc > 1:325757/1‑151 (MQ=255)
ttATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGc > 2:466574/1‑151 (MQ=255)
aTTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTaaa < 1:319724/150‑1 (MQ=255)
aaCGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGaaa < 2:370531/150‑1 (MQ=255)
aCGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATc < 2:607359/151‑1 (MQ=255)
aCGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATc < 2:994784/151‑1 (MQ=255)
cGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATcc < 1:608394/151‑1 (MQ=255)
ggATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATccc > 2:147728/1‑151 (MQ=255)
ggATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATccc > 1:621887/1‑151 (MQ=255)
atgatgCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCAt < 1:342891/151‑1 (MQ=255)
atgCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTg > 2:414027/1‑151 (MQ=255)
ccccACAGAACATTTCTTATGGGCCAACGGCATATCTTACTGAAGTGCAAACAAACCTGCTTGTCGTAAAGATAACACGCGGCAAGAACAGAATAAGGGAAATGTAGGAGAAAGCAGCAGATATGACAATAAAGaaaaaaaagttgaata < 2:1064553/150‑14 (MQ=255)
ccACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTAttt < 2:1010656/151‑1 (MQ=255)
ccACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTAttt < 2:346657/151‑1 (MQ=255)
aCGGCACATGTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATACCACGCTTCGAGTGCAGCATCCGTTAACTTTCTGCCTTAGCGGCATATATGCCAGTAAAGAACTCCCATTTGATGAttttt < 2:229054/151‑1 (MQ=255)
ggAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTAttttttt > 2:554634/1‑151 (MQ=255)
ggAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTAttttttt > 1:767444/1‑151 (MQ=255)
ggAACATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTAttttttt < 2:875009/151‑1 (MQ=255)
aaCATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTATTTTTTTg > 2:852848/1‑150 (MQ=255)
cATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTATTTTTTTGATa < 1:317790/151‑1 (MQ=255)
cATTTCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTATTTTTTTGATa < 1:142864/151‑1 (MQ=255)
tCTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTATTTTTTTGATAAtc < 2:454925/150‑1 (MQ=255)
cTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTATTTTTTTGATAAtctt > 2:20817/1‑151 (MQ=255)
cTTATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTATTTTTTTGATAAtctt > 1:663298/1‑151 (MQ=255)
tATGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTATTTTTTTGATAAtcttct > 2:771836/1‑151 (MQ=255)
aTGGGCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTATTTTTTTGATAAtcttct < 2:477863/150‑1 (MQ=255)
gggCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTATTTTTTTGATAATCTTCTTCg > 2:32283/1‑151 (MQ=255)
ggCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTATTTTTTTGATAATCTTCTTCGc > 1:331013/1‑151 (MQ=255)
gCCAACGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTATTTTTTTGATAATCTTCTTCGCt < 1:945559/151‑1 (MQ=255)
aCGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTATTTTTTTGATAATCTTCTTCGCTTTCg > 2:101061/1‑151 (MQ=255)
cGGCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTATTTTTTTGATAATCTTCTTCGCTTTCg > 1:1052378/1‑150 (MQ=255)
gCATTTCTTACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTATTTTTTTGATAATCTTCTTCGCTTTCGaac > 1:831051/1‑151 (MQ=255)
tACTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTATTTTTTTGATAATCTTCTTCGCTTTCGAACAACTCGTg > 1:216433/1‑151 (MQ=255)
cTGCAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTATTTTTTTGATAATCTTCTTCGCTTTCGAACAACTCGTgcg > 2:430356/1‑151 (MQ=255)
|
ACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAATCCCATTTGACTATTTTTTTGATAATCTTCTTCGCTTTCGAACAACTCGTGCG > NC_000913/1843752‑1844045
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
