Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A8 F50 I2 R1	150	68.2	2132745	98.7%	2105019	150.2

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,168,019	G→A	V96V (GTC→GTT)	yegR ←	uncharacterized protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,168,019	0	G	A	100.0%	291.5 / NA	72	V96V (GTC→GTT)	yegR	uncharacterized protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (33/39); total (33/39)

ACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCGACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATATTCTACCCCTGGCTAAAGAAGCTTCGGCTTCGGTG  >  NC_000913/2167871‑2168166

acaTCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAac                                                                                                                                                   <  2:768197/151‑1 (MQ=255)

 caTCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGAACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAac                                                                                                                                                   >  1:699886/1‑150 (MQ=255)

    cGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCa                                                                                                                                               <  1:607624/151‑1 (MQ=255)

      aTAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATg                                                                                                                                             >  2:207199/1‑151 (MQ=255)

       tAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGt                                                                                                                                            >  2:848105/1‑151 (MQ=255)

       tAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGACAGACGAGCAACACCATGt                                                                                                                                            >  1:948854/1‑151 (MQ=255)

        aGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTa                                                                                                                                           <  1:926351/151‑1 (MQ=255)

           aTCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATc                                                                                                                                        <  1:449250/151‑1 (MQ=255)

             cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATcc                                                                                                                                       <  2:474317/150‑1 (MQ=255)

             cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATcc                                                                                                                                       <  1:684562/150‑1 (MQ=255)

             cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATcc                                                                                                                                       <  1:293565/150‑1 (MQ=255)

              ctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCt                                                                                                                                      >  1:731041/1‑150 (MQ=255)

                    cATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCtt                                                                                                                               >  1:424618/1‑151 (MQ=255)

                    cATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCtt                                                                                                                               >  1:351337/1‑151 (MQ=255)

                            gATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTc                                                                                                                       <  2:178091/151‑1 (MQ=255)

                            gATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTc                                                                                                                       >  1:979575/1‑151 (MQ=255)

                            gATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTc                                                                                                                       >  2:787165/1‑151 (MQ=255)

                            gATGCCTTTCACTTACCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTc                                                                                                                       >  2:471468/1‑151 (MQ=255)

                             aTGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCa                                                                                                                      <  1:728479/151‑1 (MQ=255)

                               gCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAg                                                                                                                     <  2:301975/150‑1 (MQ=255)

                                   ttCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCa                                                                                                                 <  1:207101/150‑1 (MQ=255)

                                   ttCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCa                                                                                                                 <  1:732822/150‑1 (MQ=255)

                                   ttCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCa                                                                                                                 <  1:662665/150‑1 (MQ=255)

                                          aTCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTg                                                                                                         >  1:879681/1‑151 (MQ=255)

                                            cGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGc                                                                                                        >  2:175534/1‑150 (MQ=255)

                                             ggCATCGTGCTCGCACAGGTTCCGGCTACGCGCAGCCGGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTGCTCCTTCTGTCTTCAGCTCAACTACTTgta                                                                                                       <  2:199212/150‑3 (MQ=255)

                                                 tCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCAttttt                                                                                                  >  2:434637/1‑151 (MQ=255)

                                                    tGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTg                                                                                               >  2:77527/1‑151 (MQ=255)

                                                     gCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGc                                                                                              <  1:34529/151‑1 (MQ=255)

                                                          cacaGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGa                                                                                         <  1:716300/151‑1 (MQ=255)

                                                           acaGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTg                                                                                          >  2:384034/1‑149 (MQ=255)

                                                                taccGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAac                                                                                    >  2:816354/3‑150 (MQ=255)

                                                                  ccGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAacac                                                                                  >  1:550395/1‑150 (MQ=255)

                                                                  ccGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAacac                                                                                  <  2:432650/150‑1 (MQ=255)

                                                                  ccGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAAcaca                                                                                 <  1:21710/151‑1 (MQ=255)

                                                                  ccGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAAcaca                                                                                 <  1:638383/151‑1 (MQ=255)

                                                                      cTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGaa                                                                              >  2:636298/1‑150 (MQ=255)

                                                                        aCGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATg                                                                           >  1:977217/1‑151 (MQ=255)

                                                                            acaGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGtt                                                                       >  1:606941/1‑151 (MQ=255)

                                                                            acaGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCT‑AACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTg                                                                      <  2:25479/151‑1 (MQ=255)

                                                                                    aaCGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCAtt                                                               >  2:6654/1‑151 (MQ=255)

                                                                                      cgcgCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCAtttt                                                             >  1:654380/1‑151 (MQ=255)

                                                                                        cgcATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCAtttttt                                                           >  1:283446/1‑151 (MQ=255)

                                                                                         gcATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTa                                                          <  2:67408/151‑1 (MQ=255)

                                                                                          cATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTAc                                                         <  2:73249/151‑1 (MQ=255)

                                                                                          cATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTAc                                                         <  1:729317/151‑1 (MQ=255)

                                                                                           atatTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACt                                                        <  2:1787/151‑1 (MQ=255)

                                                                                              tttGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACtat                                                      >  2:558892/1‑150 (MQ=255)

                                                                                                tGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTatat                                                    <  1:881934/150‑1 (MQ=255)

                                                                                                tGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATAtt                                                   >  1:825281/1‑151 (MQ=255)

                                                                                                  aCGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATAtttt                                                 <  1:909616/151‑1 (MQ=255)

                                                                                                  aCGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATAtttt                                                 >  2:504487/1‑151 (MQ=255)

                                                                                                    gCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCt                                               <  1:811588/151‑1 (MQ=255)

                                                                                                            aaaaaTATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCAcc                                          >  2:35611/1‑148 (MQ=255)

                                                                                                             aaaaTATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCAcc                                          >  2:652792/1‑147 (MQ=255)

                                                                                                              aaaTATTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGata                                     <  1:18396/151‑1 (MQ=255)

                                                                                                                atatTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATAtt                                   <  2:33193/151‑1 (MQ=255)

                                                                                                                atatTCTCACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATAtt                                   <  2:234409/151‑1 (MQ=255)

                                                                                                                    tctcACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATATTCTa                                <  2:329090/150‑1 (MQ=255)

                                                                                                                    tctcACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATATTCTa                                <  1:891316/150‑1 (MQ=255)

                                                                                                                    tctcACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATATTCTAc                               >  2:79168/1‑151 (MQ=255)

                                                                                                                      tcACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATATTCTAccc                             >  1:578042/1‑151 (MQ=255)

                                                                                                                       cACTCTCCACATTTGAATGTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATATTCTAcccc                            <  1:391251/151‑1 (MQ=255)

                                                                                                                              cacaTTTGAATGTCAGACGAGCAACACAATGTAATCCTACACATTCTGTCTTCAGCTCAACTATTTACATTTTTTAGCACTGTGTAACACAGAAATGAGTTGCATCTTTTTTTACTATATTTTCTGCACCAGATATTCTATCCCTggtaa                      >  2:710964/1‑147 (MQ=255)

                                                                                                                                         gTCAGACGAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATATTCTACCCCTGGCTAAAGAAgcttcg           <  1:336746/150‑1 (MQ=255)

                                                                                                                                                gAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATATTCTACCCCTGGCTAAAGAAGCTTCGGCTTCGgt   <  1:502990/151‑1 (MQ=255)

                                                                                                                                                gAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATATTCTACCCCTGGCTAAAGAAGCTTCGGCTTCGgt   >  2:150892/1‑151 (MQ=255)

                                                                                                                                                gAGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATATTCTACCCCTGGCTAAAGAAGCTTCGGCTTCGgt   >  1:874735/1‑151 (MQ=255)

                                                                                                                                                 aGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATATTCTACCCCTGGCTAAAGAAGCTTCGGCTTCGgtg  <  2:471596/151‑1 (MQ=255)

                                                                                                                                                 aGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATATTCTACCCCTGGCTAAAGAAGCTTCGGCTTCGgtg  <  2:311592/151‑1 (MQ=255)

                                                                                                                                                 aGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATATTCTACCCCTGGCTAAAGAAGCTTCGGCTTCGgtg  <  2:310898/151‑1 (MQ=255)

                                                                                                                                                 aGCAACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATATTCTACCCCTGGCTAAAGAAGCTTCGGCTTCGgtg  <  1:636316/151‑1 (MQ=255)

ACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAAATATTCTCACTCTCCACATTTGAATGTCAGACGAGCGACACCATGTAATCCTACACCTTCTGTCTTCAGCTCAACTATTTGCATTTTTTTGCCCTGAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATATTCTACCCCTGGCTAAAGAAGCTTCGGCTTCGGTG  >  NC_000913/2167871‑2168166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A