Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F50 I2 R1 150 68.2 2132745 98.7% 2105019 150.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,503,689 A→G I266T (ATT→ACT)  fryA ← putative PTS enzyme: Hpr, enzyme I and IIA components

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,503,6890AG100.0% 276.5 / NA 71I266T (ATT→ACT) fryAputative PTS enzyme: Hpr, enzyme I and IIA components
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (40/31);  total (40/31)

AAGCCACTCAGTACCGGGATCGCCGAGGCACGGGCCAGAATCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAATGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGC  >  NC_000913/2503545‑2503835
                                                                                                                                                |                                                                                                                                                  
aaGCCACTCAGTACCGGGATCGCCGAGGCACGGGCCAGAATCAGTGTATGCGAGGTGCGCCCGGCTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAATGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGt                                                                                                                                                >  2:341392/1‑149 (MQ=255)
    cACTCAGTACCGGGATCGCCGAGGCACGGGCCAGAATCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGttt                                                                                                                                          <  2:926285/151‑1 (MQ=255)
     aCTCAGTACCGGGATCGCCGAGGCACGGGCCAGAATCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGtttt                                                                                                                                         <  2:1054957/151‑1 (MQ=255)
     aCTCAGTACCGGGATCGCCGAGGCACGGGCCAGAATCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGtttt                                                                                                                                         <  2:791685/151‑1 (MQ=255)
       tCAGTACCGGGATCGCCGAGGCACGGGCCAGAATCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTc                                                                                                                                       >  2:473236/1‑151 (MQ=255)
         aGTACCGGGATCGCCGAGGCACGGGCCAGAATCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCaa                                                                                                                                     <  1:407879/151‑1 (MQ=255)
           tACCGGGATCGCCGAGGCACGGGCCAGAATCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGc                                                                                                                                   >  2:977971/1‑151 (MQ=255)
             ccGGGATCGCCGAGGCACGGGCCAGAATCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCAc                                                                                                                                 >  2:5793/1‑151 (MQ=255)
             ccGGGATCGCCGAGGCACGGGCCAGAATCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTCTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCa                                                                                                                                  <  2:573839/150‑1 (MQ=255)
                 gATCGCCGAGGCACGGGCCAGAATCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGc                                                                                                                             <  2:683619/151‑1 (MQ=255)
                 gATCGCCGAGGCACGGGCCAGAATCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGc                                                                                                                             <  2:803338/151‑1 (MQ=255)
                   tCGCCGAGGCACGGGCCAGAATCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCtt                                                                                                                           >  2:733172/1‑151 (MQ=255)
                   tCGCCGAGGCACGGGCCAGAATCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCtt                                                                                                                           >  2:362409/1‑151 (MQ=255)
                     gCCGAGGCACGGGCCAGAATCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCttgt                                                                                                                         >  1:840968/1‑151 (MQ=255)
                               gggCCAGAATCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCtt                                                                                                               >  2:870456/1‑151 (MQ=255)
                                 gCCAGAATCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTc                                                                                                              >  2:837714/1‑150 (MQ=255)
                                        tCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCgg                                                                                                      >  1:346077/1‑151 (MQ=255)
                                        tCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCgg                                                                                                      >  2:32823/1‑151 (MQ=255)
                                         cAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCgg                                                                                                      <  1:898418/150‑1 (MQ=255)
                                         cAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGc                                                                                                     <  2:1053593/151‑1 (MQ=255)
                                           gtgtATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGcc                                                                                                    >  1:259397/1‑150 (MQ=255)
                                             gtATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAg                                                                                                  <  1:982184/150‑1 (MQ=255)
                                             gtATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAg                                                                                                  <  2:462828/150‑1 (MQ=255)
                                               aTGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTg                                                                                               <  2:547847/151‑1 (MQ=255)
                                                 gCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGa                                                                                              <  1:542818/150‑1 (MQ=255)
                                                   gAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGatat                                                                                           >  1:633311/1‑151 (MQ=255)
                                                    aGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATg                                                                                          <  2:144428/151‑1 (MQ=255)
                                                          gcCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATgcagca                                                                                     >  2:260811/1‑150 (MQ=255)
                                                            ccGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACt                                                                                  >  1:699209/1‑151 (MQ=255)
                                                                ttttCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTc                                                                              >  2:754968/1‑151 (MQ=255)
                                                                 tttCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTc                                                                              <  2:116740/150‑1 (MQ=255)
                                                                    ctcCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTg                                                                          >  1:135871/1‑151 (MQ=255)
                                                                      ccAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGa                                                                         <  1:939311/150‑1 (MQ=255)
                                                                        aGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGatat                                                                      <  1:205056/151‑1 (MQ=255)
                                                                           aTCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATcgc                                                                   <  1:265860/151‑1 (MQ=255)
                                                                            tCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATcgcg                                                                  >  2:970392/1‑151 (MQ=255)
                                                                              aTGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGa                                                                 >  2:277846/1‑150 (MQ=255)
                                                                                 cccGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGt                                                             >  2:617514/1‑151 (MQ=255)
                                                                                 cccGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGt                                                             >  2:511013/1‑151 (MQ=255)
                                                                                  ccGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTc                                                            <  2:1041014/151‑1 (MQ=255)
                                                                                  ccGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTc                                                            >  1:814221/1‑151 (MQ=255)
                                                                                    gCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGc                                                          >  1:953203/1‑151 (MQ=255)
                                                                                      aaGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCt                                                         >  2:891036/1‑150 (MQ=255)
                                                                                      aaGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTa                                                        <  2:473580/151‑1 (MQ=255)
                                                                                          tttttCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAacac                                                    >  1:415867/1‑151 (MQ=255)
                                                                                            tttCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACg                                                   <  1:142012/150‑1 (MQ=255)
                                                                                               cAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTcg                                               >  2:514292/1‑151 (MQ=255)
                                                                                               cAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTc                                                <  2:946167/150‑1 (MQ=255)
                                                                                                   tCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCgcgc                                            >  2:851315/1‑150 (MQ=255)
                                                                                                    cAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCgcgc                                            >  1:948413/1‑149 (MQ=255)
                                                                                                        gCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATaa                                      <  1:464996/151‑1 (MQ=255)
                                                                                                        gCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATa                                       >  1:510552/1‑150 (MQ=255)
                                                                                                         cTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAAt                                     >  1:352547/1‑151 (MQ=255)
                                                                                                          tCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATc                                    >  1:688613/1‑151 (MQ=255)
                                                                                                          tCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATc                                    >  1:170666/1‑151 (MQ=255)
                                                                                                          tCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGATCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAAt                                     >  2:34705/1‑150 (MQ=255)
                                                                                                           cAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATCg                                   >  2:668220/1‑151 (MQ=255)
                                                                                                             aaaaCTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATCGCt                                 <  1:462992/151‑1 (MQ=255)
                                                                                                              aaaCTGGCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATCGCTg                                >  2:799866/1‑151 (MQ=255)
                                                                                                                   ggCTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATCGCTggc                              >  1:296334/1‑148 (MQ=255)
                                                                                                                     cTTGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATCGCTggcagagg                         >  1:506849/1‑151 (MQ=255)
                                                                                                                      ttGGGGTTAAATCTTCAGCCACCAGAGGGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATCGCTggcagaggc                        >  2:669681/1‑151 (MQ=255)
                                                                                                                       tGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATCGCTggcagagg                         <  1:970433/149‑1 (MQ=255)
                                                                                                                       tGGGGTTAAATCTTCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATCGCTggcagagg                         <  1:644610/149‑1 (MQ=255)
                                                                                                                                    tCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTgg             <  1:211407/148‑1 (MQ=255)
                                                                                                                                    tCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTg              <  1:898099/147‑1 (MQ=255)
                                                                                                                                    tCAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGgcgc          >  1:612550/1‑151 (MQ=255)
                                                                                                                                     cAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGgcgc          >  2:427355/1‑150 (MQ=255)
                                                                                                                                     cAGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCa         <  1:599163/151‑1 (MQ=255)
                                                                                                                                      aGCCACCAGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCaa        <  1:185869/151‑1 (MQ=255)
                                                                                                                                            caGAGTGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGc  <  1:463972/151‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                  
AAGCCACTCAGTACCGGGATCGCCGAGGCACGGGCCAGAATCAGTGTATGCGAGGTGCGCCCGGTTTTCTCCAGAATCATGCCCGCAAGATTTTTCAAATCAAGGCTCAAAAACTGGCTTGGGGTTAAATCTTCAGCCACCAGAATGGTCGGTTTTTCAAGCACCAGCTTGTTGCGCGGCTTCAGTTCCGGCCAGGTGATATGCAGCAACTGTTCGCTGATATCGCGAATGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGC  >  NC_000913/2503545‑2503835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A