Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I1 R1
|
144 |
141.8 |
4677362 |
93.6% |
4378010 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,028,056 |
T→C |
intergenic (‑39/+132) |
yedQ ← / ← yodC |
putative membrane‑anchored diguanylate cyclase/uncharacterized protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,028,056 | 0 | T | C | 99.3%
| 549.2
/ NA
| 141 | intergenic (‑39/+132) | yedQ/yodC | putative membrane‑anchored diguanylate cyclase/uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (73/67); minor base G (1/0); total (74/67) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 141 total aligned reads displayed.
GAAAAAAGCAATACCACGATAAAGCAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCATAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCA > NC_000913/2027908‑2028203
|
gAAAAAAGCAATACCACGATAAAGCAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACaa < 1:1014646/151‑1 (MQ=255)
aaaaGCAATACCACGATAAAGCAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCt > 2:382029/1‑151 (MQ=255)
aaGCAATACCACGATAAAGCAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTgg < 1:1526576/151‑1 (MQ=255)
aGCAATACCACGATAAAGCAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGc > 1:168156/1‑151 (MQ=255)
aaTACCACGATAAAGCAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGAt > 1:742804/1‑151 (MQ=255)
aaTACCACGATAAAGCAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGATTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGAt > 1:1212197/1‑151 (MQ=255)
ccACGATAAAGCAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAg < 1:959467/149‑1 (MQ=255)
aCGATAAAGCAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGt > 2:868784/1‑150 (MQ=255)
aCGATAAAGCAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGt > 3:507350/1‑150 (MQ=255)
cGATAAAGCAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTa < 1:243711/150‑1 (MQ=255)
cGATAAAGCAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTAc > 1:783961/1‑151 (MQ=255)
gATAAAGCAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTAcc > 1:407903/1‑151 (MQ=255)
aTAAAGCAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCg < 4:346084/151‑1 (MQ=255)
aaaGCAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGc > 2:1332339/1‑150 (MQ=255)
aaGCAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCaa < 2:314808/151‑1 (MQ=255)
aGCAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCaa > 3:367844/1‑150 (MQ=255)
cAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAAc > 2:416261/1‑151 (MQ=255)
agaTTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGc < 2:685849/151‑1 (MQ=255)
agaTTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGc < 1:527907/151‑1 (MQ=255)
gaTTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCg < 1:901051/151‑1 (MQ=255)
aaCGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATa < 2:1294385/150‑1 (MQ=255)
aCATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAAtttt < 2:56612/151‑1 (MQ=255)
tGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTtat > 4:345068/1‑150 (MQ=255)
aCCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAAt > 3:225898/1‑151 (MQ=255)
cAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAAtgg < 3:4546/151‑1 (MQ=255)
aGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAAtggt < 2:802121/151‑1 (MQ=255)
ggCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAAtggtg > 2:374551/1‑151 (MQ=255)
ggCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAAtggtg < 4:471092/151‑1 (MQ=255)
aGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATg > 2:869338/1‑150 (MQ=255)
aGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATg > 2:750153/1‑150 (MQ=255)
aGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGa < 3:408172/151‑1 (MQ=255)
cggcgTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATa > 2:1204960/1‑150 (MQ=255)
cggcgTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATa > 1:1159839/1‑150 (MQ=255)
ggcgTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATa > 2:1700105/1‑149 (MQ=255)
ggcgTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAg < 4:113864/151‑1 (MQ=255)
gcgTGCGAGTTTTTTCAACTAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGTCTCCCAACCTGCTTTTTTATGATTCTGTCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAGTTTTATAATGGTGGCATGAt > 1:418417/1‑147 (MQ=255)
cgTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGa > 3:355911/1‑150 (MQ=255)
gCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGAcgcg > 1:588612/1‑151 (MQ=255)
gCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGAcgcg < 1:1266555/151‑1 (MQ=255)
gAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGAc > 2:978563/1‑151 (MQ=255)
aGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACt < 2:769974/151‑1 (MQ=255)
gTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACt > 2:1421338/1‑150 (MQ=255)
gTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTa < 4:203191/151‑1 (MQ=255)
ttCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTAtcatt > 1:573228/1‑151 (MQ=255)
ttCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTAtcat < 3:242687/150‑1 (MQ=255)
tCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTAtcatt < 3:555991/150‑1 (MQ=255)
cAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTAgcatt < 1:1107436/149‑1 (MQ=255)
aaCCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTAtcattcat < 2:62711/151‑1 (MQ=255)
aaCCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTAtcattcat > 4:109533/1‑151 (MQ=255)
aCCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATcattcatt > 1:274045/1‑151 (MQ=255)
aCCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATcattcatt < 1:637250/151‑1 (MQ=255)
aGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGc > 4:331370/1‑150 (MQ=255)
aGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCa < 2:117727/151‑1 (MQ=255)
tGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCAt > 4:42422/1‑151 (MQ=255)
ggTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCAtt < 2:1723509/151‑1 (MQ=255)
ggTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCAtt > 2:1221942/1‑151 (MQ=255)
tttCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAg < 3:70096/150‑1 (MQ=255)
ttCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGc < 1:1118102/150‑1 (MQ=255)
ccATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGcaca < 4:130278/151‑1 (MQ=255)
tttttGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACAcc > 1:1140276/1‑150 (MQ=255)
ttttGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACAcc > 1:884686/1‑149 (MQ=255)
ttttGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACAcc > 2:932059/1‑149 (MQ=255)
tttGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAgg > 4:358556/1‑151 (MQ=255)
tttGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAgg > 1:1676083/1‑151 (MQ=255)
tttGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAg < 1:374499/150‑1 (MQ=255)
tttGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAg < 1:127180/150‑1 (MQ=255)
cGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGAt < 2:148361/150‑1 (MQ=255)
gctgcACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGAtgtg > 4:178716/1‑150 (MQ=255)
gctgcACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGa < 1:642368/151‑1 (MQ=255)
gctgcACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGa < 2:1205596/151‑1 (MQ=255)
tgcACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATc > 2:26679/1‑151 (MQ=255)
aCCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCgg > 2:54888/1‑151 (MQ=255)
gacgacTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTg < 2:1188720/150‑1 (MQ=255)
acgacTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGAt < 1:1540123/151‑1 (MQ=255)
acgacTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGAt < 2:742913/151‑1 (MQ=255)
cgacTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATg > 2:1327345/1‑151 (MQ=255)
gacTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGt > 1:480101/1‑151 (MQ=255)
gacTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGt < 2:1685126/151‑1 (MQ=255)
gacTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGt < 1:1699940/151‑1 (MQ=255)
acTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGtt > 2:302670/1‑151 (MQ=255)
acTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGtt > 1:206731/1‑151 (MQ=255)
acTCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGtt < 4:557883/151‑1 (MQ=255)
tCCCAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTa > 1:33432/1‑150 (MQ=255)
cccAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAAt > 3:188939/1‑151 (MQ=255)
cAACCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGa < 2:1493595/151‑1 (MQ=255)
aaCCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGAt > 3:204792/1‑151 (MQ=255)
aCCTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGAt > 1:496062/1‑150 (MQ=255)
ccTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGAt < 2:869702/149‑1 (MQ=255)
cTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATAcc > 2:604457/1‑151 (MQ=255)
cTGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATAcc > 2:476523/1‑151 (MQ=255)
tGCTTTTTTATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATAccc > 2:613247/1‑151 (MQ=255)
tttttATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCtt < 1:288434/149‑1 (MQ=255)
tttttATGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCtt < 2:631003/149‑1 (MQ=255)
ttATGACTCTGGCAGAACCTGGAGATAGCGTACCGCAAAACAGCGATAATTTTACAATGGTGGCATGCTAAGACGCGACTATCGTTAATACCAGGCATTCGAACACCAGGACAGCGGAGATACGGCAAGATGTTAGTAACACCCTATc > 1:307287/1‑148 (MQ=255)
aTGATTCTGGCACAACCTGGCTATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGTCTGATGTTAATGATACCCTTGCacac < 1:1343094/150‑1 (MQ=255)
aTGATTCTGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATACGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCTTTCACAct > 1:15116/1‑151 (MQ=255)
tGGCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCg > 3:72431/1‑151 (MQ=255)
ggCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGc < 2:588695/151‑1 (MQ=255)
gCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCa < 1:1371637/151‑1 (MQ=255)
gCACAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCa < 2:11507/151‑1 (MQ=255)
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GAAAAAAGCAATACCACGATAAAGCAGAGATTAACGACATGACCAGGCCCCAGGCGGCGTGCGAGTTTTTTCAACCAGCTCTGGTTTTCCATTTTTGTCTCGTGCTGCACCCTGACGACTCCCAACCTGCTTTTTTATGATTCTGGCATAACCTGGCGATAGCGTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCA > NC_000913/2027908‑2028203
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
