Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F50 I3 R1 143 109.6 3434427 98.5% 3382910 150.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,209,036 G→A G357D (GGC→GAC)  yehP → VMA domain putative YehL ATPase stimulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,209,0360GA99.1% 379.3 / ‑4.5 112G357D (GGC→GAC) yehPVMA domain putative YehL ATPase stimulator
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base A (47/64);  total (48/64)
Fisher's exact test for biased strand distribution p-value = 4.29e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.44e-01

Only 100 of 115 total aligned reads displayed.

TTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTTGTTAAGCGCAG  >  NC_000913/2208888‑2209182
                                                                                                                                                    |                                                                                                                                                  
ttttACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGacg                                                                                                                                                  >  2:405679/1‑151 (MQ=255)
ttttACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGacg                                                                                                                                                  >  2:619645/1‑151 (MQ=255)
      gAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGcac                                                                                                                                               >  1:1125324/1‑148 (MQ=255)
      gAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCACCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACaa                                                                                                                                             >  1:1109234/1‑150 (MQ=255)
       aaGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAAt                                                                                                                                           <  1:1600181/151‑1 (MQ=255)
               tcatcatcaTTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAgccgcc                                                                                                                                    <  1:183169/150‑1 (MQ=255)
                catcatcatTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCAt                                                                                                                                  >  1:100729/1‑151 (MQ=255)
                catcatcatTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCAt                                                                                                                                  >  2:27853/1‑151 (MQ=255)
                 atcatcatTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATg                                                                                                                                 >  2:1403059/1‑151 (MQ=255)
                 atcatcatTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATg                                                                                                                                 >  1:1379478/1‑151 (MQ=255)
                   catcatTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGAc                                                                                                                               >  1:1133137/1‑151 (MQ=255)
                   catcatTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGAc                                                                                                                               >  2:1590673/1‑151 (MQ=255)
                    atcatTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACg                                                                                                                              >  2:1132338/1‑151 (MQ=255)
                      catTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGcc                                                                                                                            >  2:869527/1‑151 (MQ=255)
                      catTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGcc                                                                                                                            >  2:1130873/1‑151 (MQ=255)
                       atTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGcc                                                                                                                            <  1:750496/150‑1 (MQ=255)
                          aCTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGc                                                                                                                        <  1:1694641/151‑1 (MQ=255)
                             gACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGa                                                                                                                      <  2:93519/150‑1 (MQ=255)
                             gACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCGCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCg                                                                                                                       <  1:898420/149‑1 (MQ=255)
                               cGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCt                                                                                                                   >  1:468597/1‑151 (MQ=255)
                                gCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTg                                                                                                                  >  2:527540/1‑151 (MQ=255)
                                 cATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTgg                                                                                                                 >  1:121218/1‑151 (MQ=255)
                                  aTCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGc                                                                                                                >  2:1603128/1‑151 (MQ=255)
                                  aTCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGc                                                                                                                >  2:252660/1‑151 (MQ=255)
                                  aTCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACGGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCGGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGc                                                                                                                <  1:1309579/151‑1 (MQ=255)
                                   tCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGc                                                                                                                >  1:1131974/1‑150 (MQ=255)
                                       gTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCGACACCTTGTTATGACCGCGATACGGCCCAGGCGCTGGTAAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGcatc                                                                                                             <  2:587798/149‑1 (MQ=255)
                                        tGAAAAAGTGTGCCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACCCCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAAGGTCGACTCATAAATAGCCGCCATGACGCCGGGCGAGCTGGcatcat                                                                                                           <  2:687817/150‑1 (MQ=255)
                                          aaaaaGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATgg                                                                                                         <  1:845544/150‑1 (MQ=255)
                                          aaaaaGTGTGTCAAGAGCGGCATCAAAGTGCGGGGACTGGCAGCGCTCGATAGCACCGCAACCCCTTGCTATGACCGCGATCCGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATgg                                                                                                         <  1:1428301/150‑1 (MQ=255)
                                           aaaaGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCt                                                                                                       >  2:810122/1‑151 (MQ=255)
                                            aaaGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCtt                                                                                                      >  2:1018232/1‑151 (MQ=255)
                                                 gtgtCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGga                                                                                                 <  1:1466257/151‑1 (MQ=255)
                                                 gtgtCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCGGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCgg                                                                                                  <  2:393734/150‑1 (MQ=255)
                                                   gtCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGgaga                                                                                               <  2:1016830/151‑1 (MQ=255)
                                                      cAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATc                                                                                            >  1:666972/1‑151 (MQ=255)
                                                       agagCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAAAATCt                                                                                           >  2:520891/1‑151 (MQ=255)
                                                         agCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCtt                                                                                          >  1:257203/1‑150 (MQ=255)
                                                          gCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCa                                                                                        <  2:893329/151‑1 (MQ=255)
                                                           cGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTc                                                                                         >  2:461142/1‑149 (MQ=255)
                                                            ggCATCAAAGTGTTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGTTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGt                                                                                      <  1:842154/151‑1 (MQ=255)
                                                             gCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTc                                                                                     >  1:493331/1‑151 (MQ=255)
                                                             gCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTc                                                                                     <  2:614416/151‑1 (MQ=255)
                                                              cATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTc                                                                                     >  1:830183/1‑150 (MQ=255)
                                                              cATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTc                                                                                     >  1:223875/1‑150 (MQ=255)
                                                              cATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTc                                                                                     >  2:1664052/1‑150 (MQ=255)
                                                                tCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCa                                                                                    <  1:1141476/149‑1 (MQ=255)
                                                                 cAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATg                                                                                  >  2:101057/1‑150 (MQ=255)
                                                                  aaggTGCTGGGACGGGCAGCGCTGGATAGCACCGCATCACCTTGCTATGACCGCGATACGGCCCGGGGGCTGGTTAATGTCGATGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGaa                                                                                <  2:471229/148‑1 (MQ=255)
                                                                  aaaGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGaa                                                                                <  1:1193614/151‑1 (MQ=255)
                                                                   aaGTGCTGGGACTGGCAGGGCTCGATAGCCCCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAAt                                                                               <  2:963467/151‑1 (MQ=255)
                                                                     gTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTc                                                                             <  1:1072743/151‑1 (MQ=255)
                                                                       gCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCa                                                                            <  1:461101/150‑1 (MQ=255)
                                                                       gCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCa                                                                            <  1:1432867/150‑1 (MQ=255)
                                                                       gCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCa                                                                            <  1:313855/150‑1 (MQ=255)
                                                                          gggACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTa                                                                         <  2:1320112/150‑1 (MQ=255)
                                                                                ggCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCgg                                                                  <  1:1020739/151‑1 (MQ=255)
                                                                                ggCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCgg                                                                  <  1:805454/151‑1 (MQ=255)
                                                                                ggCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCg                                                                   <  1:1397042/150‑1 (MQ=255)
                                                                                ggCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCg                                                                   <  1:463918/150‑1 (MQ=255)
                                                                                ggCAGCGCTCGAAAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATTTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCgg                                                                  <  1:1276672/151‑1 (MQ=255)
                                                                                   aGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAat                                                               >  1:67203/1‑151 (MQ=255)
                                                                                    gcgcTCGATAGCACCGCAACCCCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAatt                                                              <  1:1581571/151‑1 (MQ=255)
                                                                                     cgcTCGATAGCACCGCAACCCCTTGCTATGCCCGCAATACGGCCGAGGCGCTGGTTAAGGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAatt                                                              <  2:1125410/150‑1 (MQ=255)
                                                                                     cgcTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAatt                                                              >  1:679223/1‑150 (MQ=255)
                                                                                      gcTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAatt                                                              <  1:1359910/149‑1 (MQ=255)
                                                                                          gATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAattatt                                                           >  2:1012940/1‑148 (MQ=255)
                                                                                          gATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGa                                                        <  1:211420/151‑1 (MQ=255)
                                                                                            tAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAAc                                                      >  1:216574/1‑151 (MQ=255)
                                                                                             accgcctcAACCCTTTGTTATTCCCGCAATACGGCCCAGGCCCTTGTTAATTTCGATGCACAAATAACCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAattatt                                                           <  2:905025/138‑1 (MQ=255)
                                                                                               cACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTg                                                    >  2:1217009/1‑150 (MQ=255)
                                                                                                 ccGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGaca                                                 <  2:1132323/151‑1 (MQ=255)
                                                                                                   gCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACAcc                                               <  2:1207502/151‑1 (MQ=255)
                                                                                                    cAACGCCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACAcc                                               <  2:1712994/150‑1 (MQ=255)
                                                                                                    cAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACAcc                                               >  2:935997/1‑150 (MQ=255)
                                                                                                       cacCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCa                                            <  2:575003/150‑1 (MQ=255)
                                                                                                         ccTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAgg                                          >  1:66204/1‑150 (MQ=255)
                                                                                                             gCTATGGCCGCGATACGGCCCAGGCGCTGGTTAATGTGGACGCACAAATGGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGc                                         <  2:1352207/147‑1 (MQ=255)
                                                                                                             gCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCt                                      <  1:1268440/150‑1 (MQ=255)
                                                                                                                aTGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGa                                    <  1:928842/149‑1 (MQ=255)
                                                                                                                   aCCGCGATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACgg                                 <  2:1068062/149‑1 (MQ=255)
                                                                                                                     cgcgATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGtt                             >  2:132309/1‑151 (MQ=255)
                                                                                                                        gATACGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTa                            >  1:669373/1‑149 (MQ=255)
                                                                                                                           aCGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCaa                       <  2:679281/151‑1 (MQ=255)
                                                                                                                           aCGGCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCa                        <  2:1177810/150‑1 (MQ=255)
                                                                                                                             ggCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATg                     >  1:1411529/1‑151 (MQ=255)
                                                                                                                             ggCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATg                     <  1:1132250/151‑1 (MQ=255)
                                                                                                                             ggCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATg                     >  2:1509893/1‑151 (MQ=255)
                                                                                                                              gCCCAGGCGCTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGc                    <  1:1575142/151‑1 (MQ=255)
                                                                                                                                     cgcTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGtttt             <  1:674500/151‑1 (MQ=255)
                                                                                                                                      gcTGGTTAATGTCGACTCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTTg            <  1:992451/151‑1 (MQ=255)
                                                                                                                                       cTGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTTGt           >  1:538326/1‑151 (MQ=255)
                                                                                                                                        tGGTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTTg            <  1:27852/149‑1 (MQ=255)
                                                                                                                                         ggTTAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTTGtt          <  1:1017486/150‑1 (MQ=255)
                                                                                                                                           ttAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTTGTTa         >  1:299856/1‑149 (MQ=255)
                                                                                                                                            tAATGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTTGTTAAgc      >  2:168749/1‑151 (MQ=255)
                                                                                                                                             aaTGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTTGTTAAgcg     <  1:1111135/151‑1 (MQ=255)
                                                                                                                                             aaTGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTTGTTAAgcg     >  2:503137/1‑151 (MQ=255)
                                                                                                                                             aaTGTCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTTGTTAAgc      <  2:1659511/150‑1 (MQ=255)
                                                                                                                                                 tCGACGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTTGTTAAGCGCAg  <  1:1073638/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
TTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTTGTTAAGCGCAG  >  NC_000913/2208888‑2209182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A