Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F50 I2 R1
|
121 |
82.0 |
2593086 |
97.7% |
2533445 |
150.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,350,111 |
C→T |
intergenic (‑4/+140) |
yciW ← / ← fabI |
putative oxidoreductase/enoyl‑[acyl‑carrier‑protein] reductase, NADH‑dependent |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,350,111 | 0 | C | T | 98.9%
| 351.5
/ ‑4.1
| 93 | intergenic (‑4/+140) | yciW/fabI | putative oxidoreductase/enoyl‑[acyl‑carrier‑protein] reductase, NADH‑dependent |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (39/53); total (40/53) |
| Fisher's exact test for biased strand distribution p-value = 4.30e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.44e-01 |
CTTTTTCAAGGATCACGTCGAGTAGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGCGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGGGCGGCAGAACGCCGCCCATCTTTACCAACAGAACGATTATTT > NC_000913/1349966‑1350256
|
cTTTTTCAAGTATCACGTCGAGTAGAAAGGGATCGCTGCCCTTTGCGGCTACCTGGACCAGAGGCACAACGTCATACTCCGCTGTCCTGGCTTGCGTTTCATGATACCAAGGGCTTTTTCCGGGGACGTGGCGTTGTTCCTTGGGTGCTcc > 1:1022725/1‑151 (MQ=255)
tttttCAAGGATCACGTCGAGTAGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCt > 2:789227/1‑151 (MQ=255)
ttttCAAGGATCACGTCGAGTAGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCt < 1:4595/150‑1 (MQ=255)
ttCAAGGATCACGTCGAGTAGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTgg > 2:39275/1‑151 (MQ=255)
ttCAAGGATCACGTCGAGTAGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTg < 1:818011/150‑1 (MQ=255)
tCAAGGATCACGTCGAGTAGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGt > 1:94288/1‑151 (MQ=255)
cAAGGATCACGTCGAGTAGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTc < 1:958182/151‑1 (MQ=255)
aaGGATCACGTCGAGTAGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCg > 2:718835/1‑151 (MQ=255)
aGGATCACGTCGAGTAGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGt < 1:421377/151‑1 (MQ=255)
gATCACGTCGAGTAGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTaa < 1:886783/151‑1 (MQ=255)
cACGTCGAGTAGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAgg > 2:694936/1‑151 (MQ=255)
cACGTCGAGTAGAAAGGGATCGATGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAgg < 1:223824/151‑1 (MQ=255)
gTCGAGTAGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGaaa < 2:169805/151‑1 (MQ=255)
gTCGAGTAGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGaa > 2:91044/1‑150 (MQ=255)
cGAGTAGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAAt < 2:1107821/150‑1 (MQ=255)
cGAGTAGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATc > 2:518593/1‑151 (MQ=255)
cGAGTAGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATc > 1:104229/1‑151 (MQ=255)
tAGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGtt > 2:364816/1‑150 (MQ=255)
aGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTAt < 1:360873/151‑1 (MQ=255)
gAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTTCTGTATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATc < 1:1022509/151‑1 (MQ=255)
gAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATc > 2:1206996/1‑151 (MQ=255)
gAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATc > 2:744786/1‑151 (MQ=255)
aaGGGATCGCTGACCTTTGCGGCTTCTGGGACCAGAGGCAGAACGTCATTCTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCt < 2:669963/151‑1 (MQ=255)
gggATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGa < 2:1075723/151‑1 (MQ=255)
tCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGc < 2:826532/150‑1 (MQ=255)
cGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCa > 2:535885/1‑150 (MQ=255)
gCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGCGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCa > 2:247106/1‑149 (MQ=255)
cTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAgg > 1:638603/1‑151 (MQ=255)
gACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAgg < 1:310355/149‑1 (MQ=255)
gACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGc < 2:634049/150‑1 (MQ=255)
aCCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCgg > 2:605102/1‑151 (MQ=255)
tGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAgg > 1:161794/1‑151 (MQ=255)
gCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAggg < 2:411880/151‑1 (MQ=255)
cGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAgggg > 1:78494/1‑151 (MQ=255)
gCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAgggg > 1:760716/1‑149 (MQ=255)
gCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGgag < 2:1041207/151‑1 (MQ=255)
tCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGaa > 2:614881/1‑150 (MQ=255)
cGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGa < 2:224734/151‑1 (MQ=255)
gggACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGAc > 2:724491/1‑151 (MQ=255)
aCCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGa < 1:787395/151‑1 (MQ=255)
aCCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGa < 1:955374/151‑1 (MQ=255)
ccAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGAt > 1:908893/1‑151 (MQ=255)
ccAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGAt < 2:172781/151‑1 (MQ=255)
cAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATc > 2:426219/1‑151 (MQ=255)
cAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATc < 1:694900/151‑1 (MQ=255)
agagGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCg > 1:690657/1‑151 (MQ=255)
gagGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCgg < 1:9236/151‑1 (MQ=255)
cAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGa < 1:877007/150‑1 (MQ=255)
cAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGAt < 2:55339/151‑1 (MQ=255)
cAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGAt > 1:636382/1‑151 (MQ=255)
gTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTGTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGTCGGATCGGCGATAACaaa < 1:1047608/151‑1 (MQ=255)
aCTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATc < 1:672446/150‑1 (MQ=255)
aCTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCa < 2:1165687/151‑1 (MQ=255)
cTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATc > 2:327380/1‑149 (MQ=255)
tCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATc > 1:467823/1‑148 (MQ=255)
ccGTAGTGCTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAg < 1:97217/149‑1 (MQ=255)
ccGTAGTACTGGATTGCGTTTCATGATTCCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGaa < 2:1008378/151‑1 (MQ=255)
ccGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAg > 2:571756/1‑149 (MQ=255)
cGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGaaa < 1:723312/151‑1 (MQ=255)
gtagtaCTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAg < 2:360459/151‑1 (MQ=255)
tagtaCTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAgg > 2:1035636/1‑151 (MQ=255)
gtaCTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGta < 2:81343/151‑1 (MQ=255)
taCTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGGGAAAGACGGCTCGGCGATAACAAATATCAGcaa > 1:165879/1‑146 (MQ=255)
aCTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGtat < 1:518565/150‑1 (MQ=255)
ggATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAAc > 2:816085/1‑150 (MQ=255)
gATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAAc > 1:900380/1‑149 (MQ=255)
aTTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACaga < 1:451482/151‑1 (MQ=255)
gCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAGCGgaga < 1:332554/150‑1 (MQ=255)
gCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAgaga < 2:489812/150‑1 (MQ=255)
cGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTTGCGTTGTTCCATGGGTGCGCCTTTGTCGTAAAGGAAATCGTTATTCTGACGCAAGGCGGGAAGCGAAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGAt < 1:723635/150‑1 (MQ=255)
cGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGAt > 2:817023/1‑150 (MQ=255)
cATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACgg < 1:148020/150‑1 (MQ=255)
aTGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGggc < 2:383018/151‑1 (MQ=255)
aTGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGggc > 1:200665/1‑151 (MQ=255)
aTGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGggc < 1:276367/151‑1 (MQ=255)
gATACCAGTGGCTTTTGCCGGGGATGAGGCGTTGTTCCCTGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATAGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGggcgg > 1:1013827/1‑151 (MQ=255)
aCCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGGGCGGCa < 2:812630/150‑1 (MQ=255)
aGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGGGCGGCAGAAc < 1:426189/151‑1 (MQ=255)
aGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGGGCGGCAGAAc < 1:663809/151‑1 (MQ=255)
gTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGGGCGGCAGAAct < 2:94281/151‑2 (MQ=255)
ttGCCGGTGATTTGGCGTTGTTCCATGGGTGCTCCTTGCTCGTAAAGGACATCGTTATCCTTACCCAAGGCGCGAAGGGGACAAAGACGTATCCGCTATAACAAATATCAGAAAGGTATAACAGCGATAACGGGCGGCATACCGCCGccc < 1:217825/150‑1 (MQ=255)
ccGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGGGCGGCAGAACGCCGCCCATCt < 2:950723/151‑1 (MQ=255)
cGGTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGGGCGGCAGAACGCCGCCCATCtt < 2:945220/151‑1 (MQ=255)
ggTGATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGGGCGGCAGAACGCCGCCCATCttt > 1:742495/1‑151 (MQ=255)
gATGTGGCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGGGCGGCAGAACGCCGCCCATCTTTAcc > 2:886680/1‑151 (MQ=255)
ggCGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTAGCCTGACGCAAGGCGAGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGGGCGGCAGAACGCCGCCCATCTTTACCAACa < 1:24437/150‑1 (MQ=255)
cGTTGTTCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGGGCGGCAGAACGCCGCCCATCTTTACCAACAGaa < 1:460546/151‑1 (MQ=255)
gttgttCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGGGCGGCAGAACGCCGCCCATCTTTACCAACAGAAc < 1:346817/151‑1 (MQ=255)
ttCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGGGCGGCAGAACGCCGCCCATCTTTACCAACAGAACGatt > 2:356382/1‑151 (MQ=255)
tCCATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGGGCGGCAGAACGCCGCCCATCTTTACCAACAGAACGatt > 1:188923/1‑150 (MQ=255)
ccATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGGGCGGCAGAACGCCGACCATCTTTACCAACAGAACGattat > 1:944841/1‑151 (MQ=255)
cATGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGGGCGGCAGAACGCCGCCCATCTTTACCAACAGAACGattatt < 1:279816/151‑1 (MQ=255)
aTGGGTGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGGGCGGCAGAACGCCGCCCATCTTTACCAACAGAACGATTAttt < 1:940207/151‑1 (MQ=255)
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CTTTTTCAAGGATCACGTCGAGTAGAAAGGGATCGCTGACCTTTGCGGCTTCCGGGACCAGAGGCAGAACGTCATACTCCGTAGTACTGGATTGCGTTTCATGATACCAGTGGCTTTTGCCGGTGATGTGGCGTTGTTCCATGGGCGCTCCTTGGTCGTAAAGGAAATCGTTATCCTGACGCAAGGCGGGAAGGGGAGAAAGACGGATCGGCGATAACAAATATCAGAAAGGTATAACAGAGATAACGGGCGGCAGAACGCCGCCCATCTTTACCAACAGAACGATTATTT > NC_000913/1349966‑1350256
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
