Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F50 I2 R1 139 64.5 2139856 92.7% 1983646 149.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 936,518 C→T P1099S (CCG→TCG)  ftsK → DNA translocase at septal ring sorting daughter chromsomes

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913936,5180CT100.0% 234.8 / NA 60P1099S (CCG→TCG) ftsKDNA translocase at septal ring sorting daughter chromsomes
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (28/32);  total (28/32)

CAACGCGCTGCGCTGGTGTGTTAACGAGATGGAGCGTCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGCCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCTGATAGCACGTCTGGCGCAAAAAGCCCGTGCC  >  NC_000913/936373‑936664
                                                                                                                                                 |                                                                                                                                                  
cAACGCGCTGCGCTGGTGTGTTAACGAGATGGAGCGTCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGt                                                                                                                                               <  2:710895/151‑1 (MQ=255)
     cgctgcgctgGTGTGTTAACGAGATGGAGCGTCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAg                                                                                                                                          <  1:87434/151‑1 (MQ=255)
      gctgcgctgGTGTGTTAACGAGATGGAGCGTCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGt                                                                                                                                         >  1:647877/1‑151 (MQ=255)
             tgGTGTGTTAACGAGATGGAGCGTCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATg                                                                                                                                  >  1:280461/1‑151 (MQ=255)
               gtgtgtTAACGAGATGGAGCGTCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGcg                                                                                                                                <  2:407872/151‑2 (MQ=255)
                 gtgtTAACGAGATGGAGCGTCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGccc                                                                                                                               >  2:955169/1‑150 (MQ=255)
                       aCGAGATGGAGCGTCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGGTGCCCAGCATcc                                                                                                                        <  2:120921/151‑1 (MQ=255)
                       aCGAGATGGAGCGTCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATcc                                                                                                                        >  1:80419/1‑151 (MQ=255)
                          agaTGGAGCGTCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGt                                                                                                                     <  1:402624/151‑1 (MQ=255)
                           gaTGGAGCGTCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTg                                                                                                                    <  1:980736/151‑1 (MQ=255)
                            aTGGAGCGTCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGc                                                                                                                   >  1:158839/1‑151 (MQ=255)
                                aGCGTCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGaa                                                                                                               <  1:717339/151‑1 (MQ=255)
                                 gCGTCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGaaa                                                                                                              <  2:203306/151‑1 (MQ=255)
                                 gCGTCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGaa                                                                                                               >  1:941389/1‑150 (MQ=255)
                                    tCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGaaaaa                                                                                                            <  1:316940/150‑1 (MQ=255)
                                      ggTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGa                                                                                                         <  1:712306/151‑1 (MQ=255)
                                         ataAACAGAAGTCGGTGCTGGGTGTGCGTAATCTGGCGGTTTATAACGAAAAAATTGCTGAGGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGTAAGTCGGGTGACAGTATGGATGCCCGGCATCCGGTGCTGAAAAAAGAAc                                                                                                       <  2:724291/150‑1 (MQ=255)
                                           aaaCTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCAt                                                                                                    >  2:261231/1‑151 (MQ=255)
                                                 aTGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATtg                                                                                              <  1:988966/151‑1 (MQ=255)
                                                   gTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCTCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATtgtg                                                                                            >  1:562605/1‑151 (MQ=255)
                                                      tGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTgtggtg                                                                                         >  1:871133/1‑151 (MQ=255)
                                                       gcgcTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGgtgt                                                                                        <  1:791869/151‑1 (MQ=255)
                                                           tGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTgttggt                                                                                    >  1:108191/1‑151 (MQ=255)
                                                             ggTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTgttggttg                                                                                  <  2:321867/151‑1 (MQ=255)
                                                               tgtgCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGa                                                                                 >  2:438890/1‑150 (MQ=255)
                                                               tgtgCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCAAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGa                                                                                 >  1:878371/1‑150 (MQ=255)
                                                                gtgCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACg                                                                               <  1:585580/151‑1 (MQ=255)
                                                                gtgCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACg                                                                               <  1:552281/151‑1 (MQ=255)
                                                                      aaTCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTg                                                                         >  1:716750/1‑151 (MQ=255)
                                                                        tCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGcc                                                                       >  2:657163/1‑151 (MQ=255)
                                                                             cGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCt                                                                  <  1:991270/151‑1 (MQ=255)
                                                                             cGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCt                                                                  >  1:143966/1‑151 (MQ=255)
                                                                                gTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCtgat                                                               >  2:1045260/1‑151 (MQ=255)
                                                                                   ataACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCtgatgat                                                            <  2:390216/151‑1 (MQ=255)
                                                                                    taACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCtgatgatg                                                           >  2:990628/1‑151 (MQ=255)
                                                                                      aCGAAAAAATTGCTGAAGCCGATCTCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGAc                                                         <  2:562574/151‑1 (MQ=255)
                                                                                       cGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACg                                                        <  2:932267/151‑1 (MQ=255)
                                                                                         aaaaaaTTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACggt                                                      <  1:839205/151‑1 (MQ=255)
                                                                                           aaaaTTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACggt                                                      >  2:455726/1‑149 (MQ=255)
                                                                                               ttGCTGAAGCCGATCGCATGATGCGTCCGATTGCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGATGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACggtaggta                                                 >  2:255339/1‑150 (MQ=255)
                                                                                                     aaGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGt                                          <  1:85839/151‑1 (MQ=255)
                                                                                                        ccGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTgg                                        >  2:87379/1‑150 (MQ=255)
                                                                                                             cGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAagag                                   <  1:727094/150‑1 (MQ=255)
                                                                                                              gCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGc                                  <  2:341334/150‑1 (MQ=255)
                                                                                                              gCATGATGCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCt                                 >  1:1049134/1‑151 (MQ=255)
                                                                                                                    tgCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCTGATAGc                           >  1:347454/1‑151 (MQ=255)
                                                                                                                     gCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGACAAAAGAACCATACCTTGTGGTGTTGGTTGACGAATTTGCCGCCCTGATGATGACGGCAGGTAAAAAAGTGGAAGAGCTGATAGc                           >  2:751145/1‑150 (MQ=255)
                                                                                                                     gCGTCCGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCTGATAGc                           <  1:1013753/150‑1 (MQ=255)
                                                                                                                          cGATTCCAGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCTGATAGCACGTCt                     >  1:686310/1‑151 (MQ=255)
                                                                                                                             ttCCCGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAACAAAGAACCATACCATGTGGCGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCTAATAGCACGTc                      >  2:665472/1‑147 (MQ=255)
                                                                                                                                 aGACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCTGATAGCACGTCTGGCGCa               >  2:210937/1‑150 (MQ=255)
                                                                                                                                  gACCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCTGATAGCACGTCTGGCGCaa              >  2:489360/1‑150 (MQ=255)
                                                                                                                                   aCCCGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCTGATAGCACGTCTGGCGCaaaa            <  1:1048959/151‑1 (MQ=255)
                                                                                                                                     ccGTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCTGATAGCACGTCTGGCGCAAAAAg          <  1:216724/151‑1 (MQ=255)
                                                                                                                                       gTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCTGATAGCACGTCTGGCGCAAAAAGcc        <  2:517688/151‑1 (MQ=255)
                                                                                                                                       gTACTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCTGATAGCACGTCTGGCGCAAAAAGcc        >  1:451072/1‑151 (MQ=255)
                                                                                                                                         aCTGGAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCTGATAGCACGTCTGGCGCAAAAAGCCCg      <  1:1045315/151‑1 (MQ=255)
                                                                                                                                            ggAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCTGATAGCACGTCTGGCGCAAAAAGCCCGt     <  1:106882/149‑1 (MQ=255)
                                                                                                                                            ggAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCTGATAGCACGTCTGGCGCAAAAAGCCCGTg    <  1:489385/150‑1 (MQ=255)
                                                                                                                                             gAAGTCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCTGATAGCACGTCTGGCGCAAAAAGCCCGTGcc  <  1:317078/151‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
CAACGCGCTGCGCTGGTGTGTTAACGAGATGGAGCGTCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGCCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCTGATAGCACGTCTGGCGCAAAAAGCCCGTGCC  >  NC_000913/936373‑936664

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A