Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
4926 |
296.4 |
4517418 |
96.8% |
4372860 |
264.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
562,639 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 562,639 | 0 | G | C | 99.7%
| 781.3
/ NA
| 336 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base C (166/168); total (168/168) |
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | CP042583 | 562,640 | 0 | C | G | 97.9%
| 755.6
/ NA
| 336 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (6/1); new base G (160/167); total (168/168) |
| Fisher's exact test for biased strand distribution p-value = 6.63e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 562,641 | 0 | T | A | 99.7%
| 794.0
/ NA
| 336 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (166/168); minor base G (1/0); total (168/168) |
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 336 total aligned reads displayed.
CGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGGCTGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCGCTCTCCGGCCAGATAATCAA‑GCTACT‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGGCTTTGCGGAATATCGCCCTGAACCATGCTAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGAAGCCGGTCAGTACCCAACCGCGCAGAAACTCGGTCACTTGCCA > CP042583/562360‑562920
|||
cGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTCCCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGCGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGa > 1:2214052/1‑289 (MQ=255)
cGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGa > 1:555564/1‑289 (MQ=255)
cGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGa > 1:1618070/1‑289 (MQ=255)
cGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGa > 1:253743/1‑289 (MQ=255)
cGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGa > 2:360132/1‑289 (MQ=255)
cGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGGTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGa > 1:2186769/1‑289 (MQ=255)
gtgtTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTtc > 1:1675488/1‑288 (MQ=255)
aTCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTtg > 2:795427/1‑285 (MQ=255)
aTCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTggg > 1:1921617/1‑289 (MQ=255)
aTCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTggg > 1:1195395/1‑289 (MQ=255)
cGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGt < 2:253743/289‑1 (MQ=255)
cGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGt > 1:143962/1‑289 (MQ=255)
aGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTaa < 1:360132/288‑1 (MQ=255)
aGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTaa > 1:707079/1‑288 (MQ=255)
aGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCCAAACCTGAATGGTTTTTTCCG‑GTTTTGGGGTaa > 2:117501/1‑288 (MQ=255)
gTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCATATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTAAGAG‑TATTAAGAAGCTGGCCTTCGTCCCACTTCAGCGATTGTGGACAATCGCCCTGAACACTGTAAACCTGAATGGTTTTTCCTG‑GTTGTGCGGtgatctc > 2:1377915/1‑282 (MQ=255)
gTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGTGTTG‑GGGGTAAACCa > 2:1867415/1‑288 (MQ=255)
tCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTAAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTg > 1:1009050/1‑289 (MQ=255)
tGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAAc > 2:696233/1‑288 (MQ=255)
agaCGCGCGTCGACAATTCCGGTGACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGc < 1:490194/288‑1 (MQ=255)
cgcgcgTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTaaa < 2:128445/269‑1 (MQ=255)
gcgTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCggg < 2:1002070/288‑1 (MQ=255)
cgTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCgggaa > 1:2052800/1‑289 (MQ=255)
cgTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACACATGGATGTAACCCCGCgggta > 2:2102341/1‑287 (MQ=255)
cGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCTGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCgggaagg < 2:885946/288‑1 (MQ=255)
tCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTa < 2:2239815/254‑1 (MQ=255)
cagcgagctACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCacg > 1:1650585/7‑289 (MQ=255)
cagcgagctACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCacg > 2:1471943/7‑289 (MQ=255)
gagctACCTTTATCACGCCACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCacga < 2:2052800/284‑1 (MQ=255)
agctACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACgg > 1:1386210/2‑288 (MQ=255)
agctACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACgg > 2:2011148/2‑288 (MQ=255)
cTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGccaccac < 1:438595/289‑1 (MQ=255)
tCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCg < 1:1471943/289‑1 (MQ=255)
gCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGAc > 1:1536554/1‑288 (MQ=255)
gCAAATCAACGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAACGATGC‑‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATAGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGAc > 1:2123554/1‑288 (MQ=255)
cAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGc > 2:523394/1‑273 (MQ=255)
cTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTa > 1:340556/1‑220 (MQ=255)
gTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACAACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGctt > 1:1373803/1‑287 (MQ=255)
ccAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCa > 1:1586958/1‑231 (MQ=255)
ccAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCa < 2:1586958/231‑1 (MQ=255)
aGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTg > 1:150700/1‑288 (MQ=255)
tGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCCCCAGCGGACCCCAGTTGCGGTTGAcc > 2:563096/1‑289 (MQ=255)
tGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCACTTGCGTTTGAcc > 1:451332/1‑289 (MQ=255)
tGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCa > 2:652630/1‑222 (MQ=255)
tGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACg > 1:873123/1‑288 (MQ=255)
gaggagaCGGTTACTGATCAAGGTGCCGATCGGTTAGCGACGACACCAGCCAGTTAATAAACGCTA‑A‑TGTGCCCATCAGCGGTGCCGTTGGGTTGTAGGAATTCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATATCAGGGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGc < 2:1037520/283‑1 (MQ=255)
aGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACg < 1:2239894/286‑1 (MQ=255)
aaCGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGt < 2:555564/288‑1 (MQ=255)
aCGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTg > 1:541408/1‑288 (MQ=255)
cGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTCACCAACGCCAGTGc > 2:1910487/1‑288 (MQ=255)
ttGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCcag > 2:443341/1‑288 (MQ=255)
ttGCTGATTAATTTACCCATGGGTGCTCGCCGCCTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTCGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCcag < 2:1962270/288‑1 (MQ=255)
ggtgcttAATTTCCGGGTCGGTTCTCGCGGGCGCCGGCCAGATAATCAA‑CGATGG‑TTTGCCCATCGGCGGGGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCcagca < 2:1101208/283‑1 (MQ=255)
tAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACt > 1:583987/1‑289 (MQ=255)
aTTTCCAGATCGGTTATCGCCGACTCCTGCCAGATAATCAA‑‑CGATTATTTGCCCATCGGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCTTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGTTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGAGCAAACAGCACGACGGCCACCACCATCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTaa < 1:1379834/289‑1 (MQ=255)
gTTATCGCCGACTCCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATcagca > 1:303377/1‑289 (MQ=255)
actcCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCACCAGCATGAAGTTAAt > 1:2083835/2‑289 (MQ=255)
ctcCGGCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCgggaaggga > 2:2086993/1‑190 (MQ=255)
gCCAGATAATCAA‑CGATGA‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATcagcag > 1:2022768/1‑274 (MQ=255)
ataatcaacgatgatttGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACg > 2:318328/15‑288 (MQ=255)
taatcaacgatgatttGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGcc < 1:1760646/276‑1 (MQ=255)
acgatgatttGCCCATCGGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTAt < 1:318328/282‑1 (MQ=255)
acgatgatttGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTAt < 2:1536554/282‑1 (MQ=255)
cgatgatttGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATc > 1:926894/7‑289 (MQ=255)
tgatttGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGCGCCAGCAGGCCACTAACCATCAACAGCAGGCAGTTAATGACTCCACCGCCCAtac > 2:1203760/4‑282 (MQ=255)
tttGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTaa > 1:1983494/1‑242 (MQ=255)
tttGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGcc < 2:437975/289‑1 (MQ=255)
ttGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCa < 2:143962/289‑1 (MQ=255)
cccATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTaa > 2:1756380/1‑238 (MQ=255)
ttGCCGTTGCGTTGTAGTAAATCTTC‑GCGCTATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGGTTGGGGAATATCGCACTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACg < 2:1663943/287‑1 (MQ=255)
gCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACggg < 1:2099054/288‑1 (MQ=255)
cgttgcgtggTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCGTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCGGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCa < 2:401881/289‑1 (MQ=255)
ttgcgttgTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCa > 2:94279/1‑252 (MQ=255)
gttgTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAAt < 1:1867415/288‑1 (MQ=255)
gttgGAGTAAAGCTTCAGGG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGACCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCC‑TTTAACGGGCCATCAATc < 2:926894/288‑1 (MQ=255)
ttgTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCCGCCGGAAGTTAATGGCTTCCACGCCCAGTATCGGACCCCGCCCTTTTAAAGGGCCATCacac > 2:753176/1‑285 (MQ=255)
ttgTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCaa > 2:492269/1‑286 (MQ=255)
tagtaAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCCAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGAACAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGTAGGAAGTTAAGGGCTTCAACTCCCATTATTGGTGCCAGCCCTTTTAACGGGCCAACAATCTg > 2:2186128/1‑287 (MQ=255)
cTTCAGCG‑TATTAAGAAGCGGGCCTTCGTCCCATGTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTACG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCg < 1:1262659/289‑1 (MQ=255)
tCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGtt < 1:412163/174‑1 (MQ=255)
tCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCa < 2:1347306/269‑1 (MQ=255)
tCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGa > 1:665959/1‑288 (MQ=255)
gttttAAGAAGCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACt < 1:802930/283‑1 (MQ=255)
agaagCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAAACATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACg < 2:150700/289‑1 (MQ=255)
agCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGa > 1:982409/1‑289 (MQ=255)
agCTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCATCCACGCCCATTATCGGTTCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGCACTGGAACCACCGGa > 2:625467/1‑289 (MQ=255)
cTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCcagca < 2:1639182/179‑1 (MQ=255)
cTGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGaa > 1:1145979/1‑288 (MQ=255)
tGGCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGAAGc < 2:337985/289‑1 (MQ=255)
gCCTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGAAGCCg > 1:511557/1‑289 (MQ=255)
cTTCGTCTCATGTCAGCCATTCCGGAATAACGCCCTGAACCATCCAACCCGGAATGGTGTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCGGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGAAGCCGGt < 2:828342/289‑1 (MQ=255)
cTTCGTCCCATTTCGGGGATTCCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGGAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGAAGCCGGt < 2:16978/289‑1 (MQ=255)
cTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGAAGCCGGt < 1:1727343/289‑1 (MQ=255)
cTTCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGAAGCCGGt < 1:759901/289‑1 (MQ=255)
tCGTCCCATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGAAGCCGGTCa < 1:1272700/289‑1 (MQ=255)
cATTTCAGCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGAAGCCGGTCAGTAccc < 1:563096/289‑1 (MQ=255)
tGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACt > 1:650639/1‑250 (MQ=255)
tatCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTGGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGAAGCCGGTCAGTACCCAACCGCGCAGAAACTCGGt < 1:109953/289‑1 (MQ=255)
tCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGAAGCCGGTCAGTACCCAACCGCGCAGAAACTCGGTCa < 1:1820957/289‑1 (MQ=255)
cccTGAACCATCGAAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGAAGCCGGTCAGTACCCAACCGCGCAGAAACTCGGTCACtt > 1:845566/1‑289 (MQ=255)
|||
CGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGGCTGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCGCTCTCCGGCCAGATAATCAA‑GCTACT‑TTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCG‑TATTAAGAAGCTGGCCTTCGTCCCATTTCAGGCTTTGCGGAATATCGCCCTGAACCATGCTAACCTGAATGGTTTTCTCCG‑GTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGAAGCCGGTCAGTACCCAACCGCGCAGAAACTCGGTCACTTGCCA > CP042583/562360‑562920
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
