Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 597,289 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583597,2890GC99.5% 498.0 / NA 212intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (98/113);  minor base A (0/1);  total (98/114)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583597,2900CG99.5% 490.4 / NA 212intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (97/114);  minor base A (1/0);  total (98/114)
Fisher's exact test for biased strand distribution p-value = 4.62e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583597,2910TA99.5% 500.9 / NA 212intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (97/114);  minor base C (1/0);  total (98/114)
Fisher's exact test for biased strand distribution p-value = 4.62e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 212 total aligned reads displayed.

GGGGTGATATTATTGTCCAGCCCGCTTGCGCTTGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCGCTCGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCGCTACC‑GCGCACCGTATCACCTTCACGAATCAAGCTACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTACTTAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTAAATCCATAAGTTACGGCGCAACATGGCAGAAGCGGTAAGCGGTTTATAACTCACGCCTTTTAACGCCA  >  CP042583/597011‑597568
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                     
  ggTGATATTATTGTCCAGCCCGCTTGCCGATGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGc                                                                                                                                                                                                                                                                              <  1:1253277/288‑1 (MQ=255)
     gATATTATTGTCCAGCCCGCTTGCCGATGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTg                                                                                                                                                                                                                                                                           <  1:1747078/288‑1 (MQ=255)
      atatTATTGTCCAGCCCGCTTGCCGATGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGc                                                                                                                                                                                                                                                                          >  2:916577/1‑288 (MQ=255)
              gTCCAGCCCGCTTGCCGATGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGaaa                                                                                                                                                                                                                                                                  >  1:276585/1‑288 (MQ=255)
               tCCAGCCCGCTTGCCGATGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAac                                                                                                                                                                                                                                                                 <  1:1680071/288‑1 (MQ=255)
                ccAGCCCGCTTGCCGATGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAacc                                                                                                                                                                                                                                                                >  2:470884/1‑288 (MQ=255)
                 cAGCCCGCTTGCCGATGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAacca                                                                                                                                                                                                                                                               >  1:815987/1‑288 (MQ=255)
                 cAGCCCGCTTGCCGATGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAacca                                                                                                                                                                                                                                                               >  1:956755/1‑288 (MQ=255)
                 cAGCCCGCTTGCCGATGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAacca                                                                                                                                                                                                                                                               >  2:226821/1‑288 (MQ=255)
                 cAGCCCGCTTGCCGATGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAacca                                                                                                                                                                                                                                                               >  1:1189352/1‑288 (MQ=255)
                   gCCCGCTTGCCGATGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAAccacca                                                                                                                                                                                                                                                            <  1:983086/289‑1 (MQ=255)
                    cccGCTTGCCGATGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTTGCCTGCCAgg                                                                                                                                                                                                                                                                      >  2:1092751/1‑278 (MQ=255)
                    cccGCTTGCCGATGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATACCCGTTGCCGGTAAAATTCTGCCCGATTAATGC‑CGACCAGCGCACCGTACCCCATTCACGAATCCCCACACCATTTGCCTTCCAGGCAAACCACCAt                                                                                                                                                                                                                                                           >  2:1207446/1‑289 (MQ=255)
                     ccGCTTGCCGATGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCAt                                                                                                                                                                                                                                                           <  1:241923/288‑1 (MQ=255)
                      cgcttgccgtggCCGTCACCCGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTg                                                                                                                                                                                                                                                         <  2:956755/289‑1 (MQ=255)
                         ttgccggtggcGTGACAAGTGCAACGTGGACGCTGTCGCTGGGATCCGGGTCAGCGGCCCGTAATGAGGACACGGGTGCGGCTCTTAGTTTATCCAGCTCAGGGTTACTGACCCCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTg                                                                                                                                                                                                                                                         <  2:2139008/276‑1 (MQ=255)
                         ttgccgatgcCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGcc                                                                                                                                                                                                                                                       >  1:1035847/8‑288 (MQ=255)
                         ttgccgatgcCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATGTGCCTGCCCGGCAAACCACCATTGcc                                                                                                                                                                                                                                                       >  2:1680071/8‑288 (MQ=255)
                              gctgccgcaccccgTTCAACCGGAACGTCCGCGCTGGGATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTAAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTa                                                                                                                                                                                                                                                 <  2:796838/276‑1 (MQ=255)
                                               aaCCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGc                                                                                                                                                                                                                                                                              >  1:253690/1‑243 (MQ=255)
                                               aaCCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGc                                                                                                                                                                                                                                                                              <  2:253690/243‑1 (MQ=255)
                                                      ccGCTCGCGCTGTCATCCGGGTTAGCGGCCCGTAATGCAGCCAGGGGTGCTGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAAcgc                                                                                                                                                                                                                         <  2:1506199/288‑1 (MQ=255)
                                                          tgtcgcTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGTCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAAcgccgc                                                                                                                                                                                                                      <  1:2085716/285‑1 (MQ=255)
                                                            gcgcTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGTTTACTGACCGCCAGATTGCTCCCGCCAGATGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGTCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTCATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGAAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAg                                                                                                                                                                                                                   <  1:530760/289‑1 (MQ=255)
                                                               cgtgcagccgatgtAGCGCCCCGGAATAGAGCAGCGCGTGGGGCTATTAGTTTTTCCGGATCAGGGTTACTGACCGGCAGAGTGCCCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTa                                                                                                                                                                                                                 <  2:54943/275‑1 (MQ=255)
                                                                tGGCATCGGGGTAAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATACAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTa                                                                                                                                                                                                                 <  1:1541102/288‑1 (MQ=255)
                                                                          gTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTCCTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAg                                                                                                                                                                                                      <  1:2012663/288‑1 (MQ=255)
                                                                           gtAGGGGGCCGTAAGGCAGCAACGCGTGCGGCTATTAGTTTAGCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGa                                                                                                                                                                                                     <  2:1372054/287‑1 (MQ=255)
                                                                                  cccGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATaa                                                                                                                                                                                              <  1:2155510/288‑1 (MQ=255)
                                                                                         tGCGGCAAGGCGTGCGGCTATTAGTTTATCCAGGTCAGGGTTACTGACCGCCGGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGttgat                                                                                                                                                                                      <  2:1849524/289‑5 (MQ=255)
                                                                                            agcaACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACCGAAAGATAAATGttgataat                                                                                                                                                                                   >  1:306671/1‑282 (MQ=255)
                                                                                            agcaACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATa                                                                                                                                                                                               >  2:425450/1‑277 (MQ=255)
                                                                                               caCGCGTGCGGCTGTTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGGCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGc                                                                                                                                                                                 <  2:1002303/287‑1 (MQ=255)
                                                                                               aaCGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGc                                                                                                                                                                                 <  2:1159715/288‑1 (MQ=255)
                                                                                                agcgaggCGGCTCTTAGTTTAGCAGGATAAGGGTGACTGACCGCCAGAGTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGcc                                                                                                                                                                                <  2:2067345/282‑1 (MQ=255)
                                                                                                aCGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGc                                                                                                                                                                                                                                                                              <  2:622892/194‑1 (MQ=255)
                                                                                                aCGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGTTAAACGCCGCCAGTAATCAATAACCGAAAGATAAATGGTGATAATGCCg                                                                                                                                                                               >  2:940215/1‑289 (MQ=255)
                                                                                                 cgcgTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTG‑CCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCgg                                                                                                                                                                              >  1:1394177/1‑288 (MQ=255)
                                                                                                   cgTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACTAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCCGTACGGGGGGCAGCAGCGGGTAAAc                                                                                                                                                                                                                           >  2:1437433/1‑242 (MQ=255)
                                                                                                            aTTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCa                                                                                                                                                                    >  2:1395581/1‑288 (MQ=255)
                                                                                                             ttAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCAc                                                                                                                                                                   >  2:759334/1‑288 (MQ=255)
                                                                                                             ttAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACt                                                                                                                                                                  <  1:1364390/289‑1 (MQ=255)
                                                                                                                  ttATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATgg                                                                                                                                                             >  1:1457986/1‑289 (MQ=255)
                                                                                                                    aTCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCCGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGCAAAATGTTGATAATGCCGGACGAAACACACTCATGGTa                                                                                                                                                           >  2:2081198/1‑289 (MQ=255)
                                                                                                                    aTCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATTGTGATAATGCCGCACGTAATCCACTCATGATa                                                                                                                                                           >  2:2156993/1‑289 (MQ=255)
                                                                                                                    aTCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTa                                                                                                                                                           <  1:470884/289‑1 (MQ=255)
                                                                                                                    aTCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTa                                                                                                                                                           <  1:782096/289‑1 (MQ=255)
                                                                                                                          cTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCGGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGttgat                                                                                                                                                                                      <  1:651506/256‑5 (MQ=255)
                                                                                                                          cTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAAcgc                                                                                                                                                                                                                         <  1:409836/221‑1 (MQ=255)
                                                                                                                           tCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAAcc                                                                                                                                                       <  2:1337477/286‑1 (MQ=255)
                                                                                                                               ggTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAg                                                                                                                                                                                                                   <  1:13325/222‑1 (MQ=255)
                                                                                                                               ggTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAg                                                                                                                                                                                                                   >  2:13325/1‑222 (MQ=255)
                                                                                                                                    cTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGc                                                                                                                                                                                                                                                        <  1:1476791/180‑1 (MQ=255)
                                                                                                                                    cTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCAc                                                                                                                                                                   <  1:558088/265‑1 (MQ=255)
                                                                                                                                                ttGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGt                                                                                                                                  <  1:1153371/286‑1 (MQ=255)
                                                                                                                                                   cTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTcagcag                                                                                                                            >  1:2060875/1‑289 (MQ=255)
                                                                                                                                                    tCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGt                                                                                                                           <  1:204812/289‑1 (MQ=255)
                                                                                                                                                                  tgtgGATTATAGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATc                                                                                                                                                                      <  1:1462865/232‑1 (MQ=255)
                                                                                                                                                                          ataGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACg                                                                                                                                                                           <  2:702839/219‑1 (MQ=255)
                                                                                                                                                                          ataGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACg                                                                                                                                                                           >  1:702839/1‑219 (MQ=255)
                                                                                                                                                                           taGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATCAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAAACAAAGACCTTGATACCGAt                                                                                                    >  2:2062448/1‑289 (MQ=255)
                                                                                                                                                                           taGGGCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGAt                                                                                                    >  2:1037628/1‑289 (MQ=255)
                                                                                                                                                                              ggCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCa                                                                                                                                               <  1:105039/243‑1 (MQ=255)
                                                                                                                                                                              ggCAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTAAGCAGCGGGTAAACGCCGCCAGTAATAAATAACAGAAAGATCAAGGTTGATAATGCCGGACGTAATTCACTCATGGTAAATCTAACACCCGACCGCAAACGGTCAGCAGACAATCAAAGACTTTGACACCGAtcat                                                                                                 >  2:327679/1‑286 (MQ=255)
                                                                                                                                                                                cAT‑TTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACg                                                                                               >  2:1031892/1‑289 (MQ=255)
                                                                                                                                                                                    ttCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTa                                                                                                                                                                                                                                                 >  2:1973559/1‑140 (MQ=255)
                                                                                                                                                                                    ttCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTa                                                                                                                                                                                                                                                 <  1:1973559/140‑1 (MQ=255)
                                                                                                                                                                                    ttCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAAt                                                                                                                   >  2:664381/1‑266 (MQ=255)
                                                                                                                                                                                    ttCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAAt                                                                                                                   <  1:664381/266‑1 (MQ=255)
                                                                                                                                                                                       tGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACca                                                                                         <  1:916577/289‑1 (MQ=255)
                                                                                                                                                                                          cgttgccgacGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACcagc                                                                                       <  1:2213144/279‑1 (MQ=255)
                                                                                                                                                                                              gccgacGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTa                                                                                                                                                           <  1:957402/211‑1 (MQ=255)
                                                                                                                                                                                                   cGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGcccaccc                                                                              <  1:759334/288‑1 (MQ=255)
                                                                                                                                                                                                           cATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGTACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTaa                                                                     <  1:116065/289‑1 (MQ=255)
                                                                                                                                                                                                                    aGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTAAATCCATAAg                                                            >  2:1938059/1‑289 (MQ=255)
                                                                                                                                                                                                                                tAAAATTCTGCCCGATTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTAAATCCATAAGTTACGGCGCaa                                                 <  1:1938059/288‑1 (MQ=255)
                                                                                                                                                                                                                                              aTTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCAc                                                                                                                                                                   <  1:1311174/160‑1 (MQ=255)
                                                                                                                                                                                                                                              aTTAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCAc                                                                                                                                                                   >  2:1311174/1‑160 (MQ=255)
                                                                                                                                                                                                                                               ttAATGCCGAACC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGAACGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTAAACCCATAAGTTACGTCGCAAAATGACaagagacgta                                 >  2:603317/1‑280 (MQ=255)
                                                                                                                                                                                                                                                 aatgccgaaCC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCTTTGCCCCAGTTCGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATTAATAACAGAAAGATAAATGTTGATAATGCCGGACGAAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATATACGGCACCAGCAGCCCACCCAGACCGTAAATCCATAAGTTACGGCGCAACATGGCAGaagcggtaag                               <  1:1409153/281‑1 (MQ=255)
                                                                                                                                                                                                                                                 aatgccgaaCC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTAAATCCATAAGTTACGGCGCAACATGGCAGaagcggtaag                               <  2:613618/281‑1 (MQ=255)
                                                                                                                                                                                                                                                   tgccgaaCC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGTCCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTAAATCCATAAGTTACGGCGCAACATGGCAGaagcggtaagcg                             <  1:2079938/283‑1 (MQ=255)
                                                                                                                                                                                                                                                        aaCC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATTCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTAAATCCATAAGTTACGGCGCAAAATGGCAGAAGCGGTAAGCCGTGta                        >  1:1962674/2‑289 (MQ=255)
                                                                                                                                                                                                                                                         aCC‑GCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTAAATCCATAAGTTACGGCGCAACATGGCAGAAGCGGTAAGCGGTTtat                       >  1:2158392/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              cgcACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGt                                                                                                                                                            >  2:971938/1‑152 (MQ=255)
                                                                                                                                                                                                                                                              cgcACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGCAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTcag                                                                                                                               >  1:850024/1‑181 (MQ=255)
                                                                                                                                                                                                                                                              cgcACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGCAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTcag                                                                                                                               <  2:850024/181‑1 (MQ=255)
                                                                                                                                                                                                                                                                     tATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGc                                                                                             >  2:1562391/1‑208 (MQ=255)
                                                                                                                                                                                                                                                                     tATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGc                                                                                             <  1:1562391/208‑1 (MQ=255)
                                                                                                                                                                                                                                                                     tATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTAAATCCATAAGTTACGGCGCAACATGGCAGAAGCGGTAAGCGGTTTATAACTCACGCCt            >  1:2190986/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                      aTCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTAAATCCATAAGTTACGGCGCAACATGGCAGAAACGGTAAGCGGTTTATAACTCCCGCCtt           >  2:409204/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       tCACCTTAACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTAAATCCATAAGTTACGGCGCAACATGGCAGAAGCGGTAAGCGGTTTATAACTCACGCCttt          <  1:940215/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                        cACCTTCACGAATCAACGAAACATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCACAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTAAATCCATAAGTTACGGCGCAACATGGCAGAAGCGGTAAGCGGTTTATAACTCACGCCtttt         <  1:1207446/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             tCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTAAATCCATAAGTTACgg                                                      <  2:2231227/239‑1 (MQ=255)
                                                                                                                                                                                                                                                                             tCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTAAATCCATAAGTTACgg                                                      >  1:2231227/1‑239 (MQ=255)
                                                                                                                                                                                                                                                                             tCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTAAATCCATAAGTTACGGCGCAACATGGCAGAAGCGGTAAGCGGTTTATAACTCACGCCTTTTAACg     >  2:1188142/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                             tCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTAAATCCATAAGTTACGGCGCAACATGGCAGAAGCGGTAAGCGGTTTATAACTCACGCCTTTTAACg     >  1:1640819/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                             tCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAACCCACCCAGACCGAAAATCCATAAGTTAAGGCGCAACATGGCAGAAGCGGGACGCGGTTAACAACGTACGCACTTCAACg     >  2:1896917/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                             tCACGAATCAACGAACCATTGGCCTACCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTAAATCCATaa                                                             >  1:1853810/1‑232 (MQ=255)
                                                                                                                                                                                                                                                                               aCGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTTGATAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACcagcag                                                                                     >  2:1466602/1‑206 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                     
GGGGTGATATTATTGTCCAGCCCGCTTGCGCTTGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAT‑TTCTGCCGTTGCGCTCGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCGCTACC‑GCGCACCGTATCACCTTCACGAATCAAGCTACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTCAGCAGCGGGTAAACGCCGCCAGTAATCAATAACAGAAAGATAAATGTACTTAATGCCGGACGTAATCCACTCATGGTAAACCTCACACCAGACCGCAAACGGTCAGCAGTAAATCAATGACTTTGATACCGATAAACGGCACCAGCAGCCCACCCAGACCGTAAATCCATAAGTTACGGCGCAACATGGCAGAAGCGGTAAGCGGTTTATAACTCACGCCTTTTAACGCCA  >  CP042583/597011‑597568

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A