Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 605,223 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583605,2230GC98.8% 593.4 / NA 255intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (2/1);  new base C (113/139);  total (115/140)
Fisher's exact test for biased strand distribution p-value = 5.90e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583605,2240CG98.8% 594.2 / NA 255intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (3/0);  new base G (112/140);  total (115/140)
Fisher's exact test for biased strand distribution p-value = 9.04e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583605,2250TA99.2% 604.2 / NA 255intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (113/140);  minor base C (2/0);  total (115/140)
Fisher's exact test for biased strand distribution p-value = 2.02e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 255 total aligned reads displayed.

CACGTTACCCGCCGCATACATCAGGCTGAAACCGCCATCACGACGCGGATCGGTTGGCTCATACAGCTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAAACTCGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGGCTAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGACTTGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTAATAGTTGCGCGGCGTGCTTGTGTTTCCTTAAAGTTAAAACTTTGATACAGATCTGATTATTTATGCAATATGCTGTCTGAT  >  CP042583/604944‑605503
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
cACGTTACCCGCCGCATACATCAGCGAGAAACCGCCATCACGACGCGGATCGGTTGGCTCATACAGCTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAg                                                                                                                                                                                                                                                                                 >  1:288220/1‑289 (MQ=255)
cACGTTACCCGCCGCATACATCAGCGAGAAACCGCCATCACGACGCGGATCGGTTGGCTCATACAGCTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAg                                                                                                                                                                                                                                                                                 >  1:1217324/1‑289 (MQ=255)
   gtgaCCCGCCGCATACACCAGCGAGAAACCGCAATCACGACGCGGATCGGTTGGCTCATACAGCTCGCCGAGCAGAAAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAACCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGgcg                                                                                                                                                                                                                                                                              <  2:1418154/286‑1 (MQ=255)
            cgcATACATCAGCGAGAAACCGCCATCACGACGCGGATCGGTTGGCTCATACAGCTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATaa                                                                                                                                                                                                                                                                      >  1:792039/1‑288 (MQ=255)
            cgcATACATCAGCGAGAAACCGCCATCACGACGCGGATCGGTTGGCTCATACAGCTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATaa                                                                                                                                                                                                                                                                      >  1:1845445/1‑288 (MQ=255)
            cgcATACATCAGCGAGAAACCGCCATCACGACGCGGATCGGTTGGCTCATACAGCTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATa                                                                                                                                                                                                                                                                       >  1:956768/1‑287 (MQ=255)
            cgcATACATCAGCGAGAAACCGCCATCACGACGCGGATCGGTTGGCTCATACAGCTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATa                                                                                                                                                                                                                                                                       <  2:956768/287‑1 (MQ=255)
              cATACATCAGCGAGAAACCGCCATCACGACGCGGATCGGTTGGCTCATACAGCTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGCACTTTATCCGCCAAAAAGACACCGCGGCTTGGCGTTCCATACACCA‑GCAACAAGTAGGCACTAAAACACTc                                                                                                                                                                                                                                                                   >  2:1611710/1‑289 (MQ=255)
                 aaagcagccagAATCCGCCATCACGACGCGGATCGGTTGGCTCATACAGCTCGCCGAGCAGACAGCTTAAGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACATCGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTa                                                                                                                                                                                                                                                                <  2:200636/279‑1 (MQ=255)
                         gagAAGCCGCCATCACGACGCGGATCGGTTGAGTCATACAGCTCGCCGATCGGACATGTTACGTCAGATTTAAACAT‑GCCATCGCCGCAGTCGGTCGGCGGCAGGGACAGATAGTGGAAGGACGGAAGGAGCTCACTGGCACCCAGCACCCCATGACGGCACGCCGTCAACGACGCCCTCAGCATCACCGCCATGCGCTTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAGC‑AGTAGGCGCGAAATAACTCGTAGGCGTGAg                                                                                                                                                                                                                                                        <  2:430497/287‑1 (MQ=255)
                         gagAAACCGCCATCACGACGCGGATCGGTTGGCTCATACAGCTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAg                                                                                                                                                                                                                                                        <  1:1691432/287‑1 (MQ=255)
                             aaCCGCCATCACGACGCGGATCGGTTGGCTCATACAGCTCGCCGAGCAGACAGCTTACGTTAGTTTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATc                                                                                                                                                                                                                                                    >  1:453201/1‑289 (MQ=255)
                             aaCCGCCATCACGACGCGGATCGGTTGGCTCATACAGCTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGGACTTTATCCGCCAAAAAGCCACCGAGGATTGGCCTGACATACACCAGCGAAC‑AGTAGGGGCCAAATAACCCGTAGGCGGGAGTac                                                                                                                                                                                                                                                     >  2:1771408/1‑287 (MQ=255)
                              aCCGCCATCACGACGCGGATCGGTTGACTCATACAGCTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCg                                                                                                                                                                                                                                                   <  1:2131733/289‑1 (MQ=255)
                               ccGCCATCACGACGCGGATCGGTTGGCTCATACAGCACGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGt                                                                                                                                                                                                                                                  <  1:1463871/289‑1 (MQ=255)
                                     tcgcgacgaGGATCGGTTGGCTCATACAGCTCGCCGAGCAGACAGCTTACGTTAAGTTTAAACAG‑GCCATAGCCGAAGACGATAATCGCCAGGGGCGGATAGAGGAATGTCGGCTGGATCCTACTGGCACCCAGCACCACATGAACGATCGCCATCAACAACGCCCGCAGCATCACCGCCATGCGATTGCCGAGAACATTAGCCGCCAAAAAGCCACCGCGGTTTGGCGTTGCAGCCACCATCGCAC‑AGTAGGCGCTAAATAACCCTTAGGCGTGAGGGTCGCTGTAtg                                                                                                                                                                                                                                            >  2:546695/4‑288 (MQ=255)
                                        cgacgCGGATCGGTTGGCTCATACAGCTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTa                                                                                                                                                                                                                                         <  2:211846/289‑1 (MQ=255)
                                         gacgCGGGTCGGTTGGCTAAAACCGCTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAg                                                                                                                                                                                                                                        <  2:837648/289‑1 (MQ=255)
                                         gacgCGGATCGGTTGGATCATACAGCTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGACGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAg                                                                                                                                                                                                                                        <  1:1895583/289‑1 (MQ=255)
                                                  cGGTTGGCTCATACAGCTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCC‑AAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTg                                                                                                                                                                                                                              <  1:1615166/289‑1 (MQ=255)
                                                       gccccagcaagacagCCGAGCAGACAGCTGAAGTAAGATGTAAAAAG‑GCCATGAACGCAGACGGTAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGAt                                                                                                                                                                                                                          <  2:676099/275‑1 (MQ=255)
                                                         acaaaccAGCTCGCCGAGCAAACAGCTTACGTTAGATTTAACCCG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGAATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTa                                                                                                                                                                                                                                                      <  2:1269746/253‑1 (MQ=255)
                                                          tCATACAGCTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATCCGATTGCCGAGAACCTTATCCGCCCACAAGCCACCGAGGCTTGGCGTCCCATCCACCAGCCCAC‑AGTAACCGCCAACCAACCCGTAGGCGGCAGTAGCGTTGTATTTTCGCTGATTGGTGAGATaga                                                                                                                                                                                                                       >  2:1064682/1‑289 (MQ=255)
                                                            atcgaGCTGGCGGAGCAGACAGGGTAGGTTAGATGTAACCAGCACCAT‑GCCGCGGACGATAATCGCCAGGGACAGATAGTGGAATGACGGATGTATCTCACTGGCACCCAGCACCACATGACCGAGCGCCATAAACAACGCCCCCAGCATCACCGCCATTCGATTGCCGAGAACGTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACGTACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTTGTGAGATAgaga                                                                                                                                                                                                                     <  2:906618/285‑1 (MQ=255)
                                                             tACAGCTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAgaga                                                                                                                                                                                                                     >  1:326769/1‑288 (MQ=255)
                                                                  cTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑CGTAGGCGCTAAACAACTCGTAGGCGGGAGTATCGTTGGATTTTAGTTGATTGGTGAAATAGAGGATcagc                                                                                                                                                                                                               >  2:465108/1‑289 (MQ=255)
                                                                  cTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATcagc                                                                                                                                                                                                               >  1:73869/1‑289 (MQ=255)
                                                                  cTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCAGAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCCCTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATcag                                                                                                                                                                                                                <  2:73869/288‑1 (MQ=255)
                                                                   tacacGAGCAGACAGCTTACGTTAGCATTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATcagc                                                                                                                                                                                                               <  2:1098640/284‑1 (MQ=255)
                                                                   tCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTAtt                                                                                                                                                                                                                                            >  1:1269746/1‑259 (MQ=255)
                                                                    cGCCGAGCAGACAGCTTACGTTAGATTGAAACAG‑GCCATAGCCGCAGACTATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATcagcag                                                                                                                                                                                                             <  1:2056990/289‑1 (MQ=255)
                                                                       cGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGc                                                                                                                                                                                                          >  2:62082/1‑289 (MQ=255)
                                                                                   ttACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTa                                                                                                                                                                                              <  1:128341/289‑1 (MQ=255)
                                                                                   ttACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGCATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTa                                                                                                                                                                                              <  1:1509653/289‑1 (MQ=255)
                                                                                     aCGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTaaa                                                                                                                                                                                            >  1:1336396/1‑289 (MQ=255)
                                                                                        ttAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTgaga                                                                                                                                                                                                                           <  1:1118590/255‑1 (MQ=255)
                                                                                                       gCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGt                                                                                                                                                                                                                                                  >  1:2091416/1‑218 (MQ=255)
                                                                                                             gCCACAGACGATAATCACCAGGGACAGATAGAGGAATGACGGATAGATCGCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTGTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTg                                                                                                                                                                      <  2:2082662/288‑1 (MQ=255)
                                                                                                                      gATAATCGCCAGGGACAAATAAAGGAATGACGGATGCATCTCACTGGCACCCAGCACCACATGACCGCTCGCCATCAACAACGCCCGCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCACAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACg                                                                                                                                                            <  2:1473578/289‑1 (MQ=255)
                                                                                                                       gtagtcggccagagcAGATAGAGCAATGACGAGTGGATCTCACTGGCACACAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCCGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACg                                                                                                                                                            <  2:1899488/274‑1 (MQ=255)
                                                                                                                        tAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGAc                                                                                                                                                          <  2:2049172/289‑1 (MQ=255)
                                                                                                                        tAATCGCCAGGGACAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGAc                                                                                                                                                          <  2:1336396/289‑1 (MQ=255)
                                                                                                                              ccAGGGACAGATAGAGGAATGACGGATGGATCCCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAAtt                                                                                                                                                                                                                                                                       <  1:1428174/174‑2 (MQ=255)
                                                                                                                                    aCAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGt                                                                                                                                                                                                                                                  >  1:2161879/1‑189 (MQ=255)
                                                                                                                                    aCAGATAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGt                                                                                                                                                                                                                                                  <  2:2161879/189‑1 (MQ=255)
                                                                                                                                         tagaagaatgacGGATGGAACTCACGGGAACCCAGACCCCAATGACCGATCGCCATCAACAACGCCCCCAGCATCCCCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAgcgcg                                                                                                                                           <  2:268475/276‑1 (MQ=255)
                                                                                                                                         tAGAGGAATGACGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAgcg                                                                                                                                             <  1:62082/285‑1 (MQ=255)
                                                                                                                                            aggaatgacGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGAc                                                                                                                                                          <  1:2029747/261‑1 (MQ=255)
                                                                                                                                            aggaatgacGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATACGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATagcgagcg                                                                                                                                         >  2:1364563/9‑286 (MQ=255)
                                                                                                                                             ggaatgacGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAAt                                                                                                                                                                                                                                                                        >  1:715667/8‑158 (MQ=255)
                                                                                                                                             ggaatgacGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAg                                                                                                                                                                   <  1:1041380/252‑1 (MQ=255)
                                                                                                                                               aatgacGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTg                                                                                                                                     <  1:1436063/282‑1 (MQ=255)
                                                                                                                                                atgacGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCAGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTgtga                                                                                                                                  >  2:1245658/5‑286 (MQ=255)
                                                                                                                                                 tgccGGATGGATCTCACTGGCACCCCGAACCCCATGACCGACCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTgtgat                                                                                                                                 <  2:792039/286‑5 (MQ=255)
                                                                                                                                                 tgacGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATcag                                                                                                                                                                                                                <  2:2026246/207‑1 (MQ=255)
                                                                                                                                                  gacGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCaa                                                                                                                                                              >  1:885833/3‑259 (MQ=255)
                                                                                                                                                  gacGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCaa                                                                                                                                                              <  2:885833/257‑1 (MQ=255)
                                                                                                                                                  gacGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTgtgatg                                                                                                                                <  1:1579701/287‑6 (MQ=255)
                                                                                                                                                   acGGATGGACATCCCGGGCACCCAGAACAACCTGACCGATCGCCATCAACAACGCCCCCAGCATCCCCGCCATTCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTgtgatg                                                                                                                                <  2:1166576/287‑6 (MQ=255)
                                                                                                                                                      gatggatCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATcag                                                                                                                                                                                                                >  1:118823/1‑205 (MQ=255)
                                                                                                                                                                  tGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGAc                                                                                                                                                          >  1:1378817/1‑247 (MQ=255)
                                                                                                                                                                          aGCACCACATGGCCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAACAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCCGCGCAACGACATCGTAAATAGCGCGCGTCTGTGATGCGTGTTTATTCAAAATAATTCcac                                                                                                        >  2:595186/1‑289 (MQ=255)
                                                                                                                                                                          aGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCcac                                                                                                        >  1:1771534/1‑289 (MQ=255)
                                                                                                                                                                                acaTGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTg                                                                                                   >  2:2194641/1‑288 (MQ=255)
                                                                                                                                                                                 caTGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGGTGCGTGTTTATTCATAATAATTCCACAATTGAc                                                                                                 >  1:1872469/1‑289 (MQ=255)
                                                                                                                                                                                 caTGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCataat                                                                                                                >  1:1505944/1‑274 (MQ=255)
                                                                                                                                                                                 caTGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCca                                                                                                         >  1:519838/1‑281 (MQ=255)
                                                                                                                                                                                 caTGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCca                                                                                                         <  2:519838/281‑1 (MQ=255)
                                                                                                                                                                                 caTGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGAc                                                                                                 >  1:2010537/1‑289 (MQ=255)
                                                                                                                                                                                  aTGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACg                                                                                                >  1:550109/1‑289 (MQ=255)
                                                                                                                                                                                    agacGATCGCCATAAACAAACCCCCCGACATCACCGCCATGCGATTGCCGAGAACGTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGc                                                                                              <  2:1845445/286‑1 (MQ=255)
                                                                                                                                                                                      ccGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGGTGCGTGTTTATTCATAATAATTCCACAATTGACGGCa                                                                                             <  2:1872469/288‑1 (MQ=255)
                                                                                                                                                                                         accGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAGAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTTAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGt                                                                                         <  1:1017945/287‑1 (MQ=255)
                                                                                                                                                                                         aTCGCCATCAACAACGCCCCCAGCATCACCGTCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGGGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACg                                                                                          >  2:309285/1‑288 (MQ=255)
                                                                                                                                                                                         aTCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGt                                                                                                                                                                                                                               >  2:1552991/1‑155 (MQ=255)
                                                                                                                                                                                         aTCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGAc                                                                                                                                                          >  2:1036246/1‑224 (MQ=255)
                                                                                                                                                                                         aTCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCGAAAATATTCCCAGATTTGCAGCGCAACGACATCGTAAATAGCGCGCGGCTGTGATGCGTGTTTAGTCATAATAATTCCACAATATACGGCAACg                                                                                          >  2:1804249/1‑288 (MQ=255)
                                                                                                                                                                                           cGCCATACACCACGACCACAGCATCCCCGCCAGGCGATTGCCGAGAAGTTTATCCGCCAAAAAGCCACCGGGGATAGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGGAGGCGGGAGTATCGTTGTATTTTAGTTGATGGGGGAGAAAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCa                                                                                       <  2:350062/289‑1 (MQ=255)
                                                                                                                                                                                                tCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTaa                                                                                  >  1:2113856/1‑289 (MQ=255)
                                                                                                                                                                                                     aacGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAg                                                                                                                                                                   >  2:1189867/1‑203 (MQ=255)
                                                                                                                                                                                                          ccccAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTAATAGTTGcgcg                                                                        <  1:1804249/289‑1 (MQ=255)
                                                                                                                                                                                                          acccAACATCACCGCCATGCGAGTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTAATAGTTGcgcg                                                                        <  2:1514384/288‑1 (MQ=255)
                                                                                                                                                                                                            ccAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACg                                                                                                                                                            <  1:806234/203‑1 (MQ=255)
                                                                                                                                                                                                                    aCCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTAATAGTTGCGCGGCGTGCTtgt                                                              >  1:841619/1‑289 (MQ=255)
                                                                                                                                                                                                                     ccGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTAATAGTTGCGCGGCGTGCTtgtg                                                             <  1:645672/289‑1 (MQ=255)
                                                                                                                                                                                                                          aTGCGATTGCCGAGAACTTTATCCGCCAAAACGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCTCGCGGCTGGTATGCGTGTTTATTCATAATAATTCCACAATGTACGGCAACGTCACGTAATAGTTGCCCGGCGTGCTggttgtt                                                          >  2:1956308/1‑283 (MQ=255)
                                                                                                                                                                                                                                    cGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTAATAGTTGCGCGGCGTGCTTGTGTTTCCTTAAAGTTaa                                              <  1:543486/289‑1 (MQ=255)
                                                                                                                                                                                                                                      agaACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTAATAGTTGCGCGGCGTGCTTGTGTTTCCTTAAAGTTaa                                              >  2:1593804/1‑287 (MQ=255)
                                                                                                                                                                                                                                       gaACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTAATAGTTGCGCGGCGTGCTTGTGTTTCCTTAAAGTTaaaa                                            <  1:113745/288‑1 (MQ=255)
                                                                                                                                                                                                                                        aaCTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTAATAGTTg                                                                            >  1:473922/1‑255 (MQ=255)
                                                                                                                                                                                                                                              aTCCGCCAAAAAGCCACCGAGGGTTGGCGTGACATACACCAGCGAAA‑AGTAGGCGCTAAAGAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTAATAGTTGCGCGGCGTGCTTGTGTTTCCTTAAAGTTAAAACTTTGATa                                    <  2:1698558/289‑1 (MQ=255)
                                                                                                                                                                                                                                              aTCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTAATAGTTGCGCGGCGTGCTTGTGTTTCCTTAAAGTTAAAACTTTGATa                                    <  2:841619/289‑1 (MQ=255)
                                                                                                                                                                                                                                                ccGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTAATAGTTGCGCGGCGTGCTTGTGTTTCCTTAAAGTTAAAACTTTGATACa                                  <  1:1609343/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   ccAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTAATAGTTGCGCGGCGTGCTTGTGTTTCCTTAAAGTTAAAACTTTGATACAGa                                >  2:476134/1‑288 (MQ=255)
                                                                                                                                                                                                                                                            cACCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTAATAGTTGCGCGGCGTGCTTGTGTTTCCTTAAAGTTAAAACTTTGATACAGATCTGattat                       <  1:2194641/288‑1 (MQ=255)
                                                                                                                                                                                                                                                             aCCGAGGATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTAATAGTTGCGCGGCGTGCTTGTGTTTCCTTAAAGTTAAAACTTTGATACAGATCTGAttattt                     <  1:1536018/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  ggATTGGCGTGACATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTAATAGTTGCGCGGCGTGCTTGTGTTTCCTTAAAGTTAAAACTTTGATACAGATCTGATTATTTATGc                 <  1:247259/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                       ggCGTGACATACACCAGCGAAC‑AGTCGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTAATAGTTGCGCGGCGTGCTTGTGTTTCCTTAAAGTTAAAACTTTGATACAGATCTGATTATTTATGCAATATg           <  1:1857429/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             aCATACACCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGTGATGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACg                                                                                          <  2:1131535/204‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 acacCAGCGAAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTgtgatg                                                                                                                                >  2:1433223/1‑157 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
CACGTTACCCGCCGCATACATCAGGCTGAAACCGCCATCACGACGCGGATCGGTTGGCTCATACAGCTCGCCGAGCAGACAGCTTACGTTAGATTTAAACAG‑GCCATAGCCGCAGACGATAATCGCCAGGGACAGATAGAGGAAACTCGGATGGATCTCACTGGCACCCAGCACCACATGACCGATCGCCATCAACAACGCCCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGGCTAC‑AGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTCCCAGATTTGCAGCGCAACGACATAGTAAATAGCGCGCGGCTGACTTGCGTGTTTATTCATAATAATTCCACAATTGACGGCAACGTCACGTAATAGTTGCGCGGCGTGCTTGTGTTTCCTTAAAGTTAAAACTTTGATACAGATCTGATTATTTATGCAATATGCTGTCTGAT  >  CP042583/604944‑605503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A