Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
4926 |
296.4 |
4517418 |
96.8% |
4372860 |
264.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
658,106 |
6 bp→TCGTCA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 658,106 | 0 | A | T | 99.2%
| 584.3
/ ‑5.1
| 249 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (1/0); major base T (134/111); minor base C (1/1); total (137/112) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 658,107 | 0 | G | C | 99.2%
| 585.9
/ NA
| 249 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base C (136/111); total (137/112) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 658,108 | 0 | C | G | 99.6%
| 587.0
/ NA
| 249 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (136/112); minor base T (1/0); total (137/112) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 |
| * | CP042583 | 658,109 | 0 | A | T | 99.6%
| 591.8
/ NA
| 249 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (135/112); minor base C (1/0); total (137/112) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 658,110 | 0 | G | C | 99.6%
| 594.8
/ NA
| 249 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (136/112); minor base A (1/0); total (137/112) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 658,111 | 0 | T | A | 99.6%
| 593.2
/ NA
| 249 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base A (136/112); total (137/112) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 249 total aligned reads displayed.
AAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCAAGTCTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TAGCAGTTCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTAGTCTGCTGAATGGCGGTCGCCTGGCGGTTGGCGATCCGGAACATGTTCCCGCTGGCATTTAT > CP042583/657841‑658378
||||||
aaaGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAg < 1:1273580/289‑1 (MQ=255)
ttAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGa > 1:1111637/1‑289 (MQ=255)
aGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAg > 1:66804/1‑289 (MQ=255)
aCTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑gc > 2:958671/1‑289 (MQ=255)
aCTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑gc > 1:839272/1‑289 (MQ=255)
ctgGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑gcg > 2:1073017/1‑288 (MQ=255)
tgGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGCTTCGTCATTC‑ATTCTCGCCCGTCAGATTGAAACGGGT‑ACGTCTg > 2:480544/1‑289 (MQ=255)
gggAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATAACGGTGTTCGCCGCCGAATCACTGACTAACGCAATGCAGGTCATTGCTACGCAGTTTAAAAAACAGAAAGGAGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAACCGGGT‑GCGCCTGc > 1:1008126/1‑289 (MQ=255)
ggAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAACGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCCGATTGAAGCGGTT‑GCGccgtcg > 2:121769/1‑285 (MQ=255)
ttCGTTACTTTGTCGCCTACATAACGTTAAATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTGGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTg < 2:1780591/288‑1 (MQ=255)
atttttGTCGCGTACATAACGTTGCATTAAGGGGTTACCAATGGCTCGGAAAGGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCGGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGAt < 2:66804/285‑1 (MQ=255)
tCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGTTCAGAAat > 1:175340/1‑289 (MQ=255)
gCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGAt < 2:1138272/262‑1 (MQ=255)
gCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTg < 1:1912446/275‑1 (MQ=255)
gCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTg > 2:1912446/1‑275 (MQ=255)
gCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAatgg > 2:2229813/1‑289 (MQ=255)
gCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAatgg > 2:572688/1‑289 (MQ=255)
gCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAatgg < 1:728739/289‑1 (MQ=255)
ccTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAatgga > 1:1294761/1‑289 (MQ=255)
ttaactAACGGTACATTACGGGATTACCAATGGCTCGTAAATGGTTGACGTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGGAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAatggat < 2:868787/284‑1 (MQ=255)
cTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAatggat < 1:598471/289‑1 (MQ=255)
cGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATg < 2:1294761/289‑1 (MQ=255)
ttACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGAt < 1:255790/268‑1 (MQ=255)
aCATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGGCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGt < 1:1470047/289‑1 (MQ=255)
cATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGTGGCGGCA‑‑CACTCTTTCGCTGTTGCTGGCAATGCACTGGTAGATGAAGGGAAAATCACGGTGTTCGCGGCCGCATCACTGACTAACGCAATGCAGCACATTGCTACGCAGCTTAAAAAAGAGCAAGGCGTGTATG‑CGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCTCCCTTCAGATGGAATCGGGT‑GCGCCGGCGGACAGGTGTATTTCTTCCGTCCAGAATCGGGTGGATTATggcgtt > 2:1644919/1‑284 (MQ=255)
cATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAatggat > 2:1102566/1‑276 (MQ=255)
aTTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTg > 1:972864/1‑289 (MQ=255)
aGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCCC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGG‑GCGCCTGCGGATCTGTTTATTTCTGCCGACTCGAAATGGATGGATTATGCGGTTGATaa > 2:2028902/1‑289 (MQ=255)
aGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCACCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTATTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATaa > 1:2112829/1‑289 (MQ=255)
ggTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATaaaa < 1:390341/288‑1 (MQ=255)
ttACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATaaaaaa < 2:1466593/288‑1 (MQ=255)
ttACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAg > 1:1941214/1‑289 (MQ=255)
ttACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGAGCAGAAATGGATGGATTATGCGGTTGAAAACAAAg > 2:1459679/1‑289 (MQ=255)
tACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAatggat < 2:1560366/265‑1 (MQ=255)
tACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGc > 1:1375257/1‑289 (MQ=255)
aCCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGTATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTGTGCGGTTGATAAAAAAGcg > 1:108996/1‑289 (MQ=255)
aCCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCGGAAATGGATGGATTATGCGGGTGATAAAAAAGcg > 1:506961/1‑289 (MQ=255)
aCCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGCGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTAGGCGGGTGATAAAAAAGcg > 1:304625/1‑289 (MQ=255)
cAATGGTTCGTAAATGGTTGAACTTGTTTGCCGGGGCTGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGcgat < 1:2025815/289‑1 (MQ=255)
cAATGGCTCGTGAATTGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGcgat < 1:2018843/289‑1 (MQ=255)
cAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGcg < 1:1073017/289‑1 (MQ=255)
cAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGcgat < 1:2229813/289‑1 (MQ=255)
cAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGcgat < 2:839272/289‑1 (MQ=255)
cAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGcgat < 2:346373/289‑1 (MQ=255)
tGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGcgatcga > 1:642238/1‑289 (MQ=255)
gCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATa > 2:548616/1‑289 (MQ=255)
cTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGGTCGCCGCCGCATCACTGACTACCGCAATGCAGAACATTGCTACGCATGTCAAAAAAGAGAAAGGCGTCGATG‑TGGTTCTTCCTTTCGC‑TACGTCATCCACTCCCTCCTGTCAGCTTG‑AGTGGGTCTCGCCTGCGACTCTGGTTCTTTCTGCCCATCAGATATGGATCTGCTATGCGGTTGCGAAAAAAgtcattgcta > 2:1227202/1‑279 (MQ=255)
cGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGcgat > 2:5822/1‑281 (MQ=255)
cGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACa > 1:556022/1‑288 (MQ=255)
aaTGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTAc < 2:430463/289‑1 (MQ=255)
aaTGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTAc < 1:1138843/289‑1 (MQ=255)
ttGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGAAACAGCTACGCGTc > 2:1817111/1‑289 (MQ=255)
cTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGTAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGATACTTCTTTCGC‑TTCGTCATCTACACACGCGCGTCCGATTGAAGCGGGT‑GCGCCTGCTGATCTGTTTATTTGTGCCGATCAGAAATGGATTGACTATGCGGTTGATAAAAACGCGATCGATACAGCTACGCGCCAGac > 2:2086204/1‑288 (MQ=255)
ttttGCCGGGGCGGCA‑‑CTTCCTTTCGCTGTTGCTGGCAATGCACTGGCCGATGAATGGAAAATCGCGGTGTTCGCCGCCGCATCACTGACTAACGCAATGTAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTg < 1:958438/288‑1 (MQ=255)
gTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTg < 1:548616/289‑1 (MQ=255)
ggcggcA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCaa < 1:1816110/288‑1 (MQ=255)
tctctTTCTCGTTGGCTGGAAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGt < 2:972864/289‑1 (MQ=255)
tctctTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGt < 2:217677/289‑1 (MQ=255)
tctctTGCGCTGTTTCTGGCACTGCACTGGAAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCAGCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGt < 2:1675807/289‑1 (MQ=255)
tGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGcgat > 2:789639/1‑237 (MQ=255)
tGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGcgat < 1:789639/237‑1 (MQ=255)
ttGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCAcc > 1:1855294/1‑289 (MQ=255)
tGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTTACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCAcc < 1:1663614/288‑1 (MQ=255)
tGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGc > 1:372852/1‑289 (MQ=255)
tGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TAGTTTCTTCTTTCGC‑TTCGTCATCTACTCCCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCTATCGAGACACCTACGCGTCAGACACTGCTCGGCACTAGCCTGCTCGTTTTATCCCCGAAAGCCAga > 2:255817/1‑288 (MQ=255)
aaTCACGGTGTTCGCCGCCGCATCACTGACTAACGGAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTGCCTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCTTGCGGTTCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATc < 1:2086204/289‑1 (MQ=255)
aTCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCg > 1:155964/1‑289 (MQ=255)
tCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGa < 1:480544/289‑1 (MQ=255)
aCGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACa > 2:828614/1‑289 (MQ=255)
cGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAg > 2:91456/1‑289 (MQ=255)
ttCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCaaa > 1:1447140/1‑288 (MQ=255)
cgcatcacTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCaa > 2:200488/8‑285 (MQ=255)
catcacTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGcgat > 1:1224018/6‑184 (MQ=255)
catcacTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTgg > 2:1356092/6‑287 (MQ=255)
cggACTAACGGAATGCCGGACATTGGTACGCAGTTTAAAAAAGAGAAGGGCGTGGGTG‑TGGTGTCTTCGTTCGC‑TTCGTCATCTACGCGCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACttca < 2:2252480/286‑4 (MQ=255)
aCTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCGGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACttcact > 2:1978332/1‑282 (MQ=255)
cGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATc < 2:552065/256‑1 (MQ=255)
cGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTTCACTGCTGAAt > 1:1791982/1‑289 (MQ=255)
tGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGcgat < 1:1973935/166‑1 (MQ=255)
tGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTTCACTGCTGAAtggtgg < 1:868527/289‑1 (MQ=255)
tGCAGGACATTGCTAAGCAGTTTAAAAAAGAGAAAGGCGTGGGTG‑TTGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCaa < 2:715760/265‑1 (MQ=255)
gACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTTCACTGCTGAATGGCGGTCg > 1:616650/1‑287 (MQ=255)
aTTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTTCACTGCTGAATGGCGGTCGCCTg > 2:338173/1‑288 (MQ=255)
tGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGGTCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTTCACTGCTGAATGGCGGTCGCCTGGCg > 1:1345938/1‑289 (MQ=255)
tGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGaca < 1:2212411/178‑1 (MQ=255)
tGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCa > 1:431484/1‑208 (MQ=255)
tGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATc > 2:492548/1‑241 (MQ=255)
tGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTTCACTGCTGAATGGCGGTCGCCTGGCg > 1:965462/1‑289 (MQ=255)
tGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTTCACTGCTGAATGGCGGTCGCCTGGCg > 1:993040/1‑289 (MQ=255)
tGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTTCACTGCTGAATGGCGGTCGCCTGGCg > 2:1736694/1‑289 (MQ=255)
cGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TTGTTCATGCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTTCACTGCTGAATGGCGGTCGCCTGGCGGTTgg < 1:1410610/289‑1 (MQ=255)
cAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGacac < 1:1187710/172‑1 (MQ=255)
cAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGt < 2:1758461/191‑1 (MQ=255)
cAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTTCACTGCTGAATGGCGGTCGCCTGGCGGTTGGCg > 1:1747342/1‑289 (MQ=255)
tttAACACAAAGAAAGTCGTGGATT‑TTGTTTCTTCTTTCGC‑TTCGTCAGCTACTCTCGCCCTTCAGCTTGAAGCGGGT‑GCGCCTGCGGATCTTATTATTTCTGCCGATCAGAAATGGCTGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTTCACTGCTGAATGGCGGTCGCCTGGCGGTTGGCGATc < 2:255332/289‑1 (MQ=255)
tttAAAAAAGAG‑AACGCGGTGATGTTGGTTTCTTCTTTCGT‑TCCGTCATCTACTCTCGCCCGTCAGATTGACGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGAACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTTCACTGCTGAATGGCGGTCGCCTGGCGGTTGGCGATc < 2:2023901/289‑1 (MQ=255)
ttAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTTCACTGCTGAATGGCGGTCGCCTGGCGGTTGGCGATc < 1:1573848/288‑1 (MQ=255)
aaaGAGAAAGCCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTTCACTGCTGAATGGCGGTCGCCTGGCGGTTGGCGATCCGGAAc < 2:636122/289‑1 (MQ=255)
agaAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAAACAACTGGACTTCACTGCTGAATGGCGGTCGCCTGGCGGTTGGCGATCCGGAACATGt > 1:562298/1‑289 (MQ=255)
gTTTCTTCTTTCGC‑TTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTTCACTGCTGAATGGCGGTCGCCTGGCGGTTgg > 2:450877/1‑257 (MQ=255)
||||||
AAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCA‑‑CTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCAAGTCTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATG‑TGGTTTCTTCTTTCGC‑TAGCAGTTCTACTCTCGCCCGTCAGATTGAAGCGGGT‑GCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTAGTCTGCTGAATGGCGGTCGCCTGGCGGTTGGCGATCCGGAACATGTTCCCGCTGGCATTTAT > CP042583/657841‑658378
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
