Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
4926 |
296.4 |
4517418 |
96.8% |
4372860 |
264.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
700,145 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 700,145 | 0 | A | T | 99.3%
| 667.1
/ NA
| 287 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (151/133); minor base C (1/1); total (152/135) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 700,146 | 0 | G | C | 98.6%
| 653.5
/ NA
| 287 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/4); new base C (152/129); total (152/135) |
| Fisher's exact test for biased strand distribution p-value = 4.63e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 700,147 | 0 | C | G | 99.3%
| 672.6
/ NA
| 287 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base G (151/134); total (152/135) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 287 total aligned reads displayed.
CGTTAACGGCGTGCCGACGACCAATCCGGCGGTAATGCAGGAGAGCCCGTTGGGTAGCCTGTTGACCTTTGCCGAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCAGCCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGA > CP042583/699868‑700423
|||
cggcggTAATGCAGGAGTCGCCGTTGGGTTCGCTGTTGACCTTTGCCGAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCggg < 1:2143245/289‑1 (MQ=255)
cggcggTAATGCAGGAGTCGCCGTTGGGTTCGCTGTTGACCTTTGCCGAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCggg < 1:2238975/289‑1 (MQ=255)
gTAATGCAGGAGTCGCCGTTGGGTTCGCTGTTGACCTTTGCCGAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAg < 1:1810074/288‑1 (MQ=255)
aTGCAGGAGTCGCCGTTGGGTTCGCTGTTGACCGTTGCCGGACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTggg < 2:871550/289‑1 (MQ=255)
gtcgccGTTGGGTTCGCTGTTGACCTTTGCCGAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGaa > 1:1995467/5‑288 (MQ=255)
gccgatggggtcgcTGTTGACCTTTGCCGAACATAAAGGCTACGCCCTTGCAGCGATGGGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCCTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGACTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCGTCGGCGCATGAT‑GATGATAAGTCGAACTTGCGACAGGTCGAGTGGGAGGCGCACAcg > 2:2024594/14‑289 (MQ=255)
tgggttcgcTGTTGACCTTTGCCGAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTcg < 1:1495532/281‑1 (MQ=255)
gttcgcTGTTGACCTTTGCCGAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTcgcg < 1:1337293/283‑1 (MQ=255)
tGACCTTTGCCGAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGaa > 2:2146865/1‑289 (MQ=255)
tttgcccacacaaaaaGCTACGCCCTTGCAGCACTGTGTGAAATTCTTAGCGGAGCCCTTTCCGGCGGTAAAACGAAGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGGATGACCACTATCATCATCAACCCGGACCTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAgg < 2:678817/277‑1 (MQ=255)
aCATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCa < 2:703562/289‑1 (MQ=255)
aTAAAGGCTACGCCCTTGCAGCGATGTGTGACATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACt < 1:116200/289‑1 (MQ=255)
aCGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACCCGCGTGGCGAACGGGAAAAA‑CAAGGGATTTCCCTGGATGCggg > 2:520635/1‑289 (MQ=255)
cGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGc < 1:1606909/260‑1 (MQ=255)
cGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGc > 2:1606909/1‑260 (MQ=255)
cGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGa < 1:2226744/272‑1 (MQ=255)
cGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGa > 2:2226744/1‑272 (MQ=255)
tggaGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGACATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTgg < 2:1863499/286‑1 (MQ=255)
tGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCGAAAG‑GAGGGGATTCGACTGGGAGCGGGAGGCCgg > 2:36658/1‑289 (MQ=255)
tGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTgg > 1:175441/1‑289 (MQ=255)
tGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTgg > 1:1274604/1‑289 (MQ=255)
tGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTgg > 1:1127472/1‑289 (MQ=255)
gATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAg < 1:577844/286‑1 (MQ=255)
aTGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCCTGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGCCGCGAACGGCGGACG‑CAGGGGATGCCACTGGACGCGGGAAGCTGGCGGGccg > 2:1259169/1‑288 (MQ=255)
aTGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGGGTCGCGAACGGCAGAAG‑CAGGGGGTGCCCCTGGGTGCGGGGAGCCGGcgcgtt > 2:1904322/1‑283 (MQ=255)
aTGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCa > 1:724487/1‑289 (MQ=255)
aTGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCa > 1:514478/1‑289 (MQ=255)
aTGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCACGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGcc < 1:483246/288‑1 (MQ=255)
tgtgtgAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCAt < 1:455000/289‑1 (MQ=255)
gtgtgAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCAtt > 2:1019738/1‑289 (MQ=255)
tgtgAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCTCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGTCAGAAG‑CAGGGGCTTCCACTGGATGCGGGATGCGGGCAGCCCAttt > 2:1201695/1‑289 (MQ=255)
tgtgAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCAttt > 1:409134/1‑289 (MQ=255)
ttGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTggg > 1:1261847/1‑210 (MQ=255)
ttGGCGGGGCGCTTTCCGGCGATAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGcc > 1:166502/1‑275 (MQ=255)
ttGGCGGGGCGCTTTCCGGCGATAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGcc < 2:166502/275‑1 (MQ=255)
tGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAgcg < 1:835337/289‑1 (MQ=255)
ggCGGGGCGCTTTTCGGAGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTATTCGGCGCGCCGGATAGTAACGCCCCGACCGAAGCCTTTGCCGCGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGCGGGGGCAGTGAGCACGCGTCGCGAACGGCAGAAG‑CAGGGGATTACACTGGATGCGGGACGCAGGCAGGGCAGTA‑GGGGTGCAgctc > 2:1779350/1‑287 (MQ=255)
aaaaCGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAag < 1:1847699/289‑1 (MQ=255)
aaCGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAagag < 1:1019738/289‑1 (MQ=255)
acgCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGt > 1:388603/1‑289 (MQ=255)
cATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTG‑GTGATGCAGCGGTGCAGATTGGTAGGCCGGAGGGGACGTT‑Gc > 2:1483428/1‑289 (MQ=255)
aaCGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGcc < 2:1651293/235‑1 (MQ=255)
gTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTgg < 1:334134/258‑1 (MQ=255)
gTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCtt > 1:902071/1‑284 (MQ=255)
gTCCCGATGCCATTCTGAACGGCATGACCACCATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCGTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGc < 2:499059/289‑1 (MQ=255)
tCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTTATGCATCGCGGCAGCTTGGTATGCCGGAAGTGACGTT‑GCAGGCTT‑TCTGTCCGCAGTTAGc > 2:84756/1‑288 (MQ=255)
tCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTG‑AACCCCCAGGCCCGAACCTTTGCCCGGT‑GGGGGGAAACCCCCCCGCCTGGTGGAGGTAAACCCGATTTTGCTACGGGCCGGGTGGGAGGTGAACACCCGTCGCG‑ACGGGAGGAGCCAGGGGATCCAACGGGAGGCGGG‑AGGTGGCCAGCCATTTGGGGAGGCAGCGGGGCAGATGGGTAT‑CCGGGAGGGAAGTTGGCAGGCTT‑CCTTCCAGCATTTAGc > 2:571034/1‑288 (MQ=255)
cATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGTGGGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCtt > 1:1293554/1‑264 (MQ=255)
cATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGTGGGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCtt < 2:1293554/264‑1 (MQ=255)
aTTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGcc < 2:1830306/210‑1 (MQ=255)
aaCTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGccc > 1:974397/1‑289 (MQ=255)
ggCATGACCACTATCCTCCTCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTc < 2:1995467/288‑1 (MQ=255)
cATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTgg < 1:1633533/193‑1 (MQ=255)
cATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTc < 2:212860/257‑1 (MQ=255)
cATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATCCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCa > 2:264873/1‑289 (MQ=255)
aTGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGcc > 1:1712969/1‑198 (MQ=255)
aTGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGcc < 2:1712969/198‑1 (MQ=255)
tGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGt > 2:2257787/1‑289 (MQ=255)
cTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCgg > 1:1896775/1‑288 (MQ=255)
cTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGGCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCgg > 2:1447565/1‑288 (MQ=255)
atcatcatcAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGa < 1:2072736/160‑1 (MQ=255)
atcatcatcAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGa > 2:2072736/1‑160 (MQ=255)
atcatcatcAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACg > 1:1589731/1‑289 (MQ=255)
atcatcaACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAgg < 1:2096619/154‑1 (MQ=255)
catcaACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTa > 2:1282677/1‑212 (MQ=255)
catcaACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTa < 1:1282677/212‑1 (MQ=255)
tcaACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAAc < 1:1452202/289‑1 (MQ=255)
tcaACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAAc < 2:409134/289‑1 (MQ=255)
aaCCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGGCGTT‑GCAGGCTT‑TCTGTCAGCAGGTAGCCAGCTAAAAAAAAGCCCGGCCAGTGGCGGACGGGCcaacaa > 2:2246742/1‑289 (MQ=255)
aaCCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACaa > 1:730724/1‑289 (MQ=255)
aaCCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGC‑‑‑AT‑GATGATAAGCCGATTTTGCTACCGGGCGAGGGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGAGTCCa > 1:684083/1‑153 (MQ=255)
ccGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCGTTGCCGAGT‑GGGTGAAAACCTCGCCGAATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGAGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAggg < 1:212577/289‑1 (MQ=255)
cGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGG‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGt < 1:1201695/289‑1 (MQ=255)
cGGAACTCTTCGGCGCGCCGGATTGTAACGCACAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGt < 1:1035448/289‑1 (MQ=255)
aCTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACa < 1:1648777/289‑1 (MQ=255)
aCTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACa < 1:2213662/289‑1 (MQ=255)
ctctACGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACAt < 1:870965/289‑1 (MQ=255)
ttCGGCGCGCCGGATTGTAACGCGCAGACCGTAGCCTTTGCCGCGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACAGGGCGAGTGGGAAGTGAACACGCTTCGCGAACTGCTGAAG‑CACGGGATTCTACTGGACGCGGGAAGCTGGCCGGCCATTT‑GTTATTCAGCGCGGCATCTTTGTATTCCGGCAAGGACGTT‑GCAGGCTTCTCTG‑CTGCAGTTATGCAGCTTGAAAAAACCCAGTCTCATGGCGGACGGGCAAACaatgcgtacgtagg > 2:1756445/1‑277 (MQ=255)
ttCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAgg > 1:1983594/1‑289 (MQ=255)
ttCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAgg > 2:309129/1‑289 (MQ=255)
gcgcCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAAt < 1:1939773/289‑1 (MQ=255)
ggacgggtaggaaCGCGCGAACCGAGGCCTTGGCGGGGG‑GGGGGAAAGCCCAGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAAt < 2:1589731/277‑1 (MQ=255)
cGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAg < 1:631571/288‑1 (MQ=255)
aTTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGt < 1:2257787/288‑1 (MQ=255)
gTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTaga < 1:36658/289‑1 (MQ=255)
tAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGc < 2:772348/219‑1 (MQ=255)
cgcgCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑AATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCC‑GAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAggg < 2:458972/259‑1 (MQ=255)
aCCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTATCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCAAGCTGCGGACGGGCAAACAAGGGCAACATAGGAGCAATTAGGGTTAGAGCctaggat > 2:1146871/1‑283 (MQ=255)
aaGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTc > 2:938884/1‑289 (MQ=255)
aGCCTTTGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCg > 1:1911023/1‑289 (MQ=255)
tttGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCaa < 1:260250/289‑1 (MQ=255)
ttGCCGAGT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAg < 2:1087390/202‑1 (MQ=255)
gT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAAc < 2:1416779/231‑1 (MQ=255)
gT‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAAc > 1:1416779/1‑231 (MQ=255)
t‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTc > 2:1640480/1‑211 (MQ=255)
t‑GGGTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAgg > 1:2044473/1‑289 (MQ=255)
ggTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAggg < 2:1885540/233‑1 (MQ=255)
gggAAAGCCTCGCCGCATGAT‑GATGGTAGGCCGATTTGGCTACCGGGGGAGTGGGAAGTGAACACGCGGCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGa < 2:1274008/286‑1 (MQ=255)
gTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGa < 1:994687/288‑1 (MQ=255)
gTGAAAGCCTCGCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGa < 1:1777641/288‑1 (MQ=255)
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CGTTAACGGCGTGCCGACGACCAATCCGGCGGTAATGCAGGAGAGCCCGTTGGGTAGCCTGTTGACCTTTGCCGAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGT‑GGGTGAAAGCCAGCCCGCATGAT‑GATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAG‑CAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTT‑GTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTT‑GCAGGCTT‑TCTGTCAGCAGTTAGCCAGCTAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGA > CP042583/699868‑700423
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
