Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
4926 |
296.4 |
4517418 |
96.8% |
4372860 |
264.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
721,476 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 721,476 | 0 | G | C | 98.7%
| 710.0
/ NA
| 311 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/3); new base C (148/154); total (154/157) |
| Fisher's exact test for biased strand distribution p-value = 6.23e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 721,477 | 0 | C | G | 99.4%
| 713.4
/ NA
| 311 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base G (152/155); total (154/157) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 721,478 | 0 | T | A | 98.7%
| 722.1
/ NA
| 311 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (154/150); minor base C (0/4); total (154/157) |
| Fisher's exact test for biased strand distribution p-value = 1.23e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 311 total aligned reads displayed.
GGTGTTGTCCACCGTGTACTCTTCAACTTCCGTACGATGTGCCGCATGCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAAGCTCTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGGCTCCAGTAGATGGGGTAAATCTCGGGACGACTAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATGCTCTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCACAACCGCGACGTTTAATCTGTTCGCGCTGCTCTGCAGTAACATGACCTGCTTTGATATCGGCA > CP042583/721203‑721758
|||
ttgtCCACCGTGTACTCTTCAACTTCCGTACGATGTGCCGCATGCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCAtt > 1:1275119/1‑288 (MQ=255)
acctgttACGCTTCAACGTCCGTACGCTGTGCGGCGTGCCAGGGTACCTATTGGGCCAGATTGCCATTAAAGCCGTTGGCGAAAACGCGCTGGTACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCAc < 2:1606456/283‑1 (MQ=255)
tgtACTCTTCAACTTCCGTACGATGTGCCGCATGCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTg > 2:1589471/1‑289 (MQ=255)
tgtACTCTTCAACTTCCGTACGATGTGCCGCATGCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGGTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGCTTGAGAAACGACTGCGCATTCGCCATTTCTTCatcctg > 2:2046524/1‑284 (MQ=255)
tgtACTCTTCAACTTCCGTACGATGTGCCGCATGCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGAGACGGTCAGGGTAGATGACGCTCACATCCGGGTTAACCCATTGCTTTCCTTCCCTTTAAAATTTCCCCAGA‑AGAATGAGAAACGACTGTGCATTCGCCATttcttcct > 2:2091451/1‑283 (MQ=255)
tACTCTTCAACTTCCGTACGATGTGCCGCATGCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGc < 2:66932/289‑1 (MQ=255)
aCTCTTCAACTTCCGTACGATGTGCCGCATGCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTGGATGGCGCTCACATCCGGGTTAAACCATTTCTTTCCATCACTTTCAAATGTCCACAGA‑CCATTTAGAAACAACCTCGCATTCGCCACTTCTTCACT‑CTGGCg > 2:1726137/1‑289 (MQ=255)
ttCAACTTCCGTACGATGTGCCGCATGCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGTGTTACACCATTGCTTTGCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAAAGACTTCGCATTCGCCATTTTTTCACT‑CTGGCGGGcc > 2:354950/1‑289 (MQ=255)
ttCAACTTCCGTACGATGTGCCGCATGCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCCCT‑CTgggcgcc > 2:1711454/1‑283 (MQ=255)
ttCAACTTCCGTACGATGTGCCGCATGCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGcc < 1:795614/289‑1 (MQ=255)
aaCTTCCGTACGATGTGCCGCATGCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAAGGACTGCGCATTCGCCATTTCTTCCCT‑CTGGCGGGcccg > 2:851378/1‑286 (MQ=255)
ccGTACGATGTGCCGCATGCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCa > 1:1686010/1‑261 (MQ=255)
gTACGATGTGCCGCATGCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCa > 1:1630013/1‑259 (MQ=255)
tgtgCCGCATGCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCa > 2:385356/1‑253 (MQ=255)
tgtgCCGCATGCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCa < 1:385356/253‑1 (MQ=255)
tgtgCCGCATGCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTgcg > 1:1222544/1‑287 (MQ=255)
ccccATGCCCAGGATCATAATGGTCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCGGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCTCGGGGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTgcgacc < 2:44462/285‑6 (MQ=255)
ccGCAAGCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTgcgacc < 2:1562516/288‑6 (MQ=255)
gCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCCGGACTGCATTTGCGCCCGCGACCAGTAGAt > 2:1056391/1‑289 (MQ=255)
atatTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTaaa > 1:675625/1‑287 (MQ=255)
atatTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAAt > 1:934979/1‑288 (MQ=255)
atTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAAtctc > 2:983106/1‑289 (MQ=255)
cgcCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTgc < 1:1705155/262‑2 (MQ=255)
ccAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGATTTCCATCACTTTCAAATGTCCACAGA‑CGATTGCGAAATGACTGCGCATTCGCCATTTCTTCACT‑CTTGCGGGCCGGCATTTGCGACTGCGTCCAGTCGCTGGGGTAACTCCCGGgacg > 2:1637411/1‑289 (MQ=255)
acaTTGCAATTAAAGACGTTGGCAAAAACGGGATGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGGATGCGCTCCAAGACTTTTGGAGGTAGTTCCGGGCGGTCGGCGGCGGATACGGTCAGTGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGgacgtg < 2:1474157/287‑3 (MQ=255)
ttGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGgacgtga < 1:442784/287‑4 (MQ=255)
ttGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGgacgtg < 1:1726137/286‑3 (MQ=255)
aaGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCg < 1:564454/289‑1 (MQ=255)
gTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGCCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCg > 1:104858/1‑289 (MQ=255)
tGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTGTGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCCTTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCCGTAGATGGGGTAAATCTCGGGCAGTGAAGCGCTGAGCGTCCCgca > 2:559875/1‑287 (MQ=255)
ggCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCgaag > 1:1514370/1‑289 (MQ=255)
ggCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCgaag > 2:197976/1‑289 (MQ=255)
aaaCGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCgagatttac < 1:46707/289‑8 (MQ=255)
gcTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGcc > 1:178091/1‑289 (MQ=255)
gcTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGcc < 2:1002349/289‑1 (MQ=255)
tGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCgg < 2:321087/289‑1 (MQ=255)
tACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCgggg < 1:1645441/288‑1 (MQ=255)
tACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCgggg < 1:967557/288‑1 (MQ=255)
tACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCgggg < 1:1587271/288‑1 (MQ=255)
gAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTa > 1:1438793/1‑289 (MQ=255)
aaagagcccGTTCCAGTGCCCCGGGATCGGTATGCGCTCCAAGACCGTTGGAGGTCGTTCCGGGGCGACGGCGGCGGATACGGTCAGGGTAGATGTCGCCCACAACCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAAAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGAc < 1:294184/281‑1 (MQ=255)
gccagcGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCa > 1:2155623/1‑174 (MQ=255)
ccagcGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCg > 1:2124794/1‑289 (MQ=255)
gTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCaa < 1:1356989/288‑1 (MQ=255)
gTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCaa < 1:133124/288‑1 (MQ=255)
tGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGtt < 1:842677/288‑1 (MQ=255)
cgcccGGGGGCGGTATGACGTCCAAGACCCTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACG‑CTGGCGGGCCTGTATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTg < 2:1751907/286‑1 (MQ=255)
cGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGAGGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTT‑ACTCCTGGCGGGCCTGCATTTGCGCGTGCGACCAGTAGAGGGGTTAAACCTGGGGACGTGAAGGGCGGAGCGGCCCGAAGCACTAATCGCGGGGGCCCTTGTAGACCGCTTCACAGccctgccctat > 2:294184/1‑279 (MQ=255)
cGGAGTCGGTATGCGCTCCAAGACCTTTGGAGCTCGTTCCGGGCGGCCGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTACACCATAGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCACCTCTTCACT‑CTGGCGGGCCTGCATTCGCTCATGCGACCAGTAGTTGTGGTAAATCTCAGGACGTGAAGCGCCGCGCGTCCCGAAGAAAGCATCGCCGGCGCCTTTGTAGAGCCCGTCAAAGCGTGTGCGGt > 2:1112515/1‑288 (MQ=255)
tCGGTGTGAGCTCCAAGGCCGTTGGAGGTCGTTCAGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGa < 2:717161/288‑1 (MQ=255)
ggTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAg > 1:153052/1‑289 (MQ=255)
tATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGt < 2:481221/288‑1 (MQ=255)
cTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCAGAAGCAAGTATCGCCGGGGCCTTGGTAGACCTCGTCGAAGCGGATGCGGTTCAGATAggtccgtc > 2:416471/1‑281 (MQ=255)
tCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCAt < 1:2031648/288‑1 (MQ=255)
aggccTTTGGAGGTCGTTCCGGGCGGACAGGGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGGGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCAtcgact < 2:1847972/286‑6 (MQ=255)
aGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCAtcgact < 1:2219457/289‑6 (MQ=255)
aGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCAtcgact < 1:631751/289‑6 (MQ=255)
ttGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGGTAGTCCAGCCTCCACTTATcc > 2:2219457/1‑288 (MQ=255)
ggTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGcc < 1:1753579/288‑1 (MQ=255)
cGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAgc > 1:42664/1‑289 (MQ=255)
cGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTc < 2:1514370/288‑1 (MQ=255)
aCGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCgg > 1:852717/1‑289 (MQ=255)
ggATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAAt < 1:504039/288‑1 (MQ=255)
aTACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATgg < 1:1924416/288‑1 (MQ=255)
aTACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTGGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATgg < 2:1221303/288‑1 (MQ=255)
ggTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGCCTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCttt > 2:1145581/1‑289 (MQ=255)
gTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCa < 1:2086243/287‑1 (MQ=255)
aTGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGcac > 2:266871/1‑289 (MQ=255)
tGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGa > 2:2162668/1‑221 (MQ=255)
gCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTg < 1:1058267/114‑1 (MQ=255)
gCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCAtcgac < 2:232323/232‑5 (MQ=255)
gCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCAtcgac > 1:232323/1‑228 (MQ=255)
gCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGCTCCCGTCCTCGCGCTTGTTCCCGGGGGAAATGGCCTTTTATCCCCTCACAAcc > 2:1694935/1‑288 (MQ=255)
gCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCCCCGCACAAcc > 2:2207823/1‑288 (MQ=255)
gCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCACAAcc > 1:1598443/1‑288 (MQ=255)
gCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTGTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGACCCCAGCCTAGCGCCTGTTCGCGGGGGGCATGGCCTTTTATCCCCGCACAAcc > 2:603731/1‑288 (MQ=255)
cGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACC‑CTGTCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCGGAGCGTCCCGACGAAATTATCGCCGGGGCCTTAGTAGACCTCGACAAAACGGTTGCGGTCCAGATAGTCCAGCGTCGACTTATCCCAGCCAAGCGCTTCTTCACCGGGGAAATGGCATCTTAGACCCGCACCACcggcggcatta > 2:891557/1‑280 (MQ=255)
ggTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTAGTAGACCTCGTCAAAGCGGtt > 2:1356427/1‑196 (MQ=255)
aaCCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTAt > 1:1114493/1‑260 (MQ=255)
aaCCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCACAACCGCGCCGGTTAATCCGt > 2:134556/1‑288 (MQ=255)
aTTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCACAACCGCGACGTTTAATCTGTTcgcg < 1:1010585/289‑1 (MQ=255)
aTTGCTTTCCATACCTTTCAAAGGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCACAACCGCGACGTTTAATCTGTTcgcg < 2:1934435/289‑1 (MQ=255)
tGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGtt < 1:1889731/185‑1 (MQ=255)
tGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGtt > 2:1889731/1‑185 (MQ=255)
tGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCACAACCGCGACGTTTAATCTGTTcgc > 1:759337/1‑286 (MQ=255)
gCTTCCCATCACTTTAAACTGTCCACAGA‑CGATTTAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCACAACCGCGACGTTTAATCTGTTcgcg < 2:1275119/286‑1 (MQ=255)
tttCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCACAACCGCGACGTTTAATCTGTTCGCgctgct < 1:197976/289‑1 (MQ=255)
tttCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCACAACCGCGACGTTTAATCTGTTCGCgctgct < 1:266871/289‑1 (MQ=255)
cATCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCCCACCCGCGACGTTTAATCTGTTCGCCCTGCTCTg > 1:532912/1‑288 (MQ=255)
accACTGTCACATGTACACGAC‑CGCTTGAGAAACGACTTCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTGGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGGCGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCACAACCGCGACGTTTAATCTGTTCGCGCTGCTCTGCa < 2:1438793/287‑1 (MQ=255)
aTCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCACAACCGCGACGTTTAATCTGTTCGCGCTGCTCTGCa < 1:342274/289‑1 (MQ=255)
aTCACTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCACAACCGCGACGTTTAATCTGTTCGCGCTGCTCTGCa < 1:1945156/289‑1 (MQ=255)
cTTTCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTAt < 2:953746/242‑1 (MQ=255)
tttCAAATGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGgacgtg > 1:2190798/1‑109 (MQ=255)
ttCAAATGGTCACAGACCGCTTGAGAAAGACATGCTCATGCTCCAATCATTCACT‑CTGGCGGGCCGGCAGTTGCGCCTGCGACCGGTAGATGGGGTAAATCTCGGGACGTGAAGCGGTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCACAACCGCGACGTTTAATCTGTTCGCGCTGCTCTGCAGTAAc < 2:787646/289‑1 (MQ=255)
aaTGTCCACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTa < 2:1777441/149‑1 (MQ=255)
ccACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCACAACCGCGACGTTTAATCTGTTCGCGCTGCTCTGCa > 1:1843674/1‑274 (MQ=255)
ccACAGA‑CGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCACAACCGCGACGTTTAATCTGTTCGCGCTGCTCTGCAGTAACATGACCTGCt < 1:1474955/289‑1 (MQ=255)
cGATTGAGAAACGACTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCACAACCGCGACGTTTAATCTGTTCGCGCTGCTCTGCAGTAACATGACCTGCTTTGatat < 1:1659798/289‑1 (MQ=255)
gagaAAGGAATGCGCGTTCGCCATTTCTTCACG‑CTGGCGGGCCTGCATTTGCGCCTGCGACCAGTAGATGGGGTAAATCTCGGGACGTGAAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATCGACTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCACAACCGCGACGTTTAATCTGTTCGCGCTGCTCTGCAGTAACATGACCTGCTTTGATATCGGCa < 2:1014979/289‑1 (MQ=255)
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GGTGTTGTCCACCGTGTACTCTTCAACTTCCGTACGATGTGCCGCATGCCAGGGATCATATTGCGCCAGATTGCCATTAAAGACGTTGGCGAAAACGCGCTGATACGCTGGAAGCAGCCAGCGTTCCAGTGCCCCGGAGTCGGTATGCGCTCCAAGACCTTTGGAGGTCGTTCCGGGCGGACGGCGGCGGATACGGTCAGGGTAGATGACGCTCACATCCGGGTTAAACCATTGCTTTCCATCACTTTCAAATGTCCACAGA‑CGATTGAGAAAGCTCTGCGCATTCGCCATTTCTTCACT‑CTGGCGGGCCTGCATTTGCGCCTGGCTCCAGTAGATGGGGTAAATCTCGGGACGACTAGCGCTGAGCGTCCCGAAGAAATTATCGCCGGGGCCTTTGTAGACCTCGTCAAAGCGGTTGCGGTCCAGATAGTCCAGCATGCTCTGATCCCAGCCTAGCGCTTGTTCGCGGGGGAAATGGCCTTTTATCACCGCACAACCGCGACGTTTAATCTGTTCGCGCTGCTCTGCAGTAACATGACCTGCTTTGATATCGGCA > CP042583/721203‑721758
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A