Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
4926 |
296.4 |
4517418 |
96.8% |
4372860 |
264.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
734,443 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 734,443 | 0 | A | T | 95.6%
| 613.4
/ NA
| 276 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (116/143); minor base C (12/0); total (132/144) |
| Fisher's exact test for biased strand distribution p-value = 9.27e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 734,444 | 0 | G | C | 97.8%
| 617.0
/ ‑5.1
| 276 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (6/0); new base C (124/144); total (132/144) |
| Fisher's exact test for biased strand distribution p-value = 1.07e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 734,445 | 0 | C | G | 97.8%
| 619.0
/ NA
| 276 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (6/0); new base G (125/144); total (132/144) |
| Fisher's exact test for biased strand distribution p-value = 1.10e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 276 total aligned reads displayed.
GACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGAGCGGGATCAGCTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑AGCTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCTTACTCGTTGACTCCGTAGAAATGCGTGATTACCCGGTGATTCAGGCGGAAATTCTGCTTTTCAGCCTGGAATTTATTCTT > CP042583/734163‑734721
|||
ccATAACCAGTATGGTCTGGGCGGTTATAGTTGGTATGGCGGCGGGAATTATCGGCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCg < 1:1161485/288‑1 (MQ=255)
tAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGt > 1:1789943/1‑289 (MQ=255)
aCCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGGGGGAGCAGACAGTTTGCAGACCCACATTTTACCCTCCCTGACGCTCGGCGCCGCAGGGCCCCCCGGGATGTCGCCCTTTTCCCCTGC‑GCCGCTTTGTctctcct > 2:2096067/1‑283 (MQ=255)
aCCAGTATGGTCTGGGCGGTTATAGTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGttt < 1:32743/289‑1 (MQ=255)
aCCAGTATGGTCGGGTGGGTTATATTTGGGATGGCGGCGGGAATTATCGCAGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGttt < 2:1269471/289‑1 (MQ=255)
aggggcTGGGTGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCg < 2:1033795/284‑1 (MQ=255)
aTGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCg < 1:677921/289‑1 (MQ=255)
aTGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCg < 2:1151662/289‑1 (MQ=255)
aTGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCg < 2:215144/289‑1 (MQ=255)
aTGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCAATTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCg < 2:245784/289‑1 (MQ=255)
tCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGa > 1:1832441/1‑289 (MQ=255)
tCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCCCGGCGCGGCAGTGGCCGCCGTGATGGCGCGGTTTACCCCCCC‑G‑CCGTTTGTCGC‑TGTTTTAAGCGAAgg > 2:1523620/1‑288 (MQ=255)
ggCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTTGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGGTTGTCGA‑TGTTTTAAGCGAAGATtat > 1:1305448/1‑289 (MQ=255)
ggCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCg < 1:805159/281‑1 (MQ=255)
ggCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCg < 2:1115379/281‑1 (MQ=255)
gCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGAGCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGAGATGGGGCGCTTTACCCGCGC‑G‑TCGTTCGTCGA‑TGTTTTAAGCGAAGATtata > 1:995494/1‑289 (MQ=255)
ttATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCGTTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGGGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCg < 2:1047568/289‑1 (MQ=255)
ttATATTTGGTATGGCGGCGGGAATTATCGCCGCCGCCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTCATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACATTTGGCAGCACTAACTTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCCCCGTGATGGCGCCCCTTACCCGCGCTG‑CGC‑TTGTCGA‑TGTTTTAAGCGCAGATTCTATGCg > 2:506993/1‑289 (MQ=255)
tataTTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTCATGGCGCGCTTTACCCGCGC‑G‑CCGTTTGTCCA‑TGTTTTACGCGACGTTGatatttgt > 2:1520323/1‑285 (MQ=255)
tATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTGTTAAGCGAAGATTATATGCTGACcggcacg > 2:483754/1‑284 (MQ=255)
tATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑GCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGGGAgg > 1:114717/1‑289 (MQ=255)
tATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGGGGCCGCCGTGCTGGCGCGCCTTCCCCCCCC‑GTCGCTTT‑TCGAGTTTTTTTAGC‑AAGTTTATATGCGTAcccctggg > 2:1185536/1‑283 (MQ=255)
cggcggGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATtata > 2:1992242/1‑270 (MQ=255)
ggAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑gggg > 1:244516/1‑289 (MQ=255)
tctCGCCGCCGGCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCGTTTCGGTGTCGGGGATCTCGGTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGc < 2:833383/287‑1 (MQ=255)
tATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGc < 1:176886/289‑1 (MQ=255)
tATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGc < 1:1887451/289‑1 (MQ=255)
tATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGc < 1:222345/289‑1 (MQ=255)
tATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTCGCAGCACTACCTTTTACCCTCCCTGACCCTCGGCGCGTCAGGTGCCGCCGTGCTGCCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑CGTTTTCACCGACGATTATACGCGTACCGCGGGGGCGAAG‑GGGGTGGGc > 2:1464654/1‑289 (MQ=255)
tATCGCCGCCGGCGGGCGTACCCGTTGGCCGGTTCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCGGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGc < 2:691666/289‑1 (MQ=255)
tCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGTCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCg < 1:1024189/249‑1 (MQ=255)
tCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGTCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCg > 2:1024189/1‑249 (MQ=255)
tCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGa < 2:458609/289‑1 (MQ=255)
tGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTg < 1:750267/289‑1 (MQ=255)
gTAACCGTTGGACGGATGGATTGGGTATGACCATTGCGGTGTGGGGGGTCTTGTGTCCGGCATTTGCTGTGGGGATGATTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGGGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCAGCCGTGATGGCGCGCTTGACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCt < 2:1628334/289‑1 (MQ=255)
gATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTAc > 2:1972028/1‑289 (MQ=255)
aTCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACg > 1:1937981/1‑289 (MQ=255)
tATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCgat < 2:244516/288‑1 (MQ=255)
tATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCgat < 2:555232/288‑1 (MQ=255)
aCCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGGGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATc > 1:231209/1‑288 (MQ=255)
ttGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACCTTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTCTATGCGTACCGCGAGGGCGCAA‑GGGGTGAGCGAAACCGTGGGTGTCCTCAAACTCTGGCTCAGTCACGCGATGCTCCTGGt > 2:2103265/1‑289 (MQ=255)
tGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCg > 2:1810356/1‑200 (MQ=255)
tGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAg < 2:1866535/237‑1 (MQ=255)
tcggggatctcgtttCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCgat < 1:524814/260‑1 (MQ=255)
tcggggatctcgtttCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCgat > 2:524814/13‑272 (MQ=255)
tcggggatctcgtttCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCa > 1:977523/13‑289 (MQ=255)
gggatctcgtttCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCg < 1:620874/181‑1 (MQ=255)
ggatctcgtttCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCatga < 1:1620735/280‑1 (MQ=255)
ggatctcgtttCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCatga < 1:1191243/280‑1 (MQ=255)
ggatctcgtttCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCatga < 1:1013172/280‑1 (MQ=255)
tcgtgtcgggCATTTGCGCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCGGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCt < 2:1305448/281‑1 (MQ=255)
cgtttCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCtt > 1:1499314/3‑289 (MQ=255)
gCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGttt > 1:590698/1‑289 (MQ=255)
tttGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCAGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCt < 1:1076017/289‑1 (MQ=255)
ggggATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTCCCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTc < 1:1439756/289‑1 (MQ=255)
ggATGCTTTTAATTCAGGTCTTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCg < 1:194783/288‑1 (MQ=255)
aTGCTTTTAATTCAGGTATGCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCggt < 1:1995574/288‑1 (MQ=255)
gCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCCACCGTAGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGGAACGCGATGATCCCGGTAGTGACCATGAGGGGCTTACTGTTTGGCTTTTTGCTCggttgt > 2:1789477/1‑289 (MQ=255)
ttcaTTGAGGTATCCTCCGTTGAACTCGGCTGGCGGCCTACCGTGGGAGCAGACAGTTGGCAGAACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCa < 1:1036497/286‑1 (MQ=255)
ttAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCa < 2:626997/289‑1 (MQ=255)
ttAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCa < 1:1132250/289‑1 (MQ=255)
tAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGAt > 1:1988809/1‑158 (MQ=255)
ggTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTa > 2:359428/1‑235 (MQ=255)
ggTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTtgtg > 1:1855820/1‑289 (MQ=255)
ggTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATACGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGGAGTGACCTTGGAGGGCTTACAGTTTGGCTTTTTTCCAGGTGGTTccttgcttttg > 2:1132250/1‑280 (MQ=255)
tcCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAg > 2:66043/1‑289 (MQ=255)
aaCTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCgg > 1:209862/1‑259 (MQ=255)
aCTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAAc < 1:446225/289‑1 (MQ=255)
ggctggctGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGGAGTGACCATGATGGGCTTACAGGTTGGCATTTTTCTCGGTGGTTGCGTCGTTGTGGAGAAATTTTTCAACTGGc > 2:880814/1‑289 (MQ=255)
gttggctgCCGACCGTGGGAGCAGACGGTGGGTCGCACTCCTTTTTACCCTCCCTGACGCTGGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGc < 2:71675/286‑1 (MQ=255)
gctggctgCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGc < 1:647060/288‑1 (MQ=255)
ctgggtgCCTACCGTGGGTGCAGACCGTTGGCCGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGcc < 2:314303/288‑1 (MQ=255)
ctggctgCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGcc < 1:1219027/288‑1 (MQ=255)
gctgCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTTGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATcc > 2:1235569/1‑206 (MQ=255)
gctgCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATc > 1:2136829/1‑205 (MQ=255)
ccgaCCGTGGGGGCAGCCAGTTGGAAGACCTACATTTTACCCCCCCTGACGGTCGGCGCGGCCGGGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTg < 2:1701186/286‑1 (MQ=255)
cTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAAcgcg < 1:1693002/194‑1 (MQ=255)
cTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTgg > 1:914867/1‑289 (MQ=255)
cTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTg < 1:483754/288‑1 (MQ=255)
gTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCt < 1:2103265/289‑1 (MQ=255)
gTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGGGACCATGATGGGCTTACAGCTTGGCTTTTTGCTCGGTGGTTCGATCGTTGTGGAGAAGATCTCCACCTGGCGGTGACTTggggttg > 2:1902482/1‑284 (MQ=255)
cAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCgat < 2:166440/184‑1 (MQ=255)
cAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCgat > 1:166440/1‑184 (MQ=255)
cAGTTGGCAGCCTTACATTTTCCCCTCCCTGACCTTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCTTACTCGTTGa < 2:977523/288‑1 (MQ=255)
tGGCAGCACTACATTTTCCCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCTTACTCGTTGa < 1:1560360/284‑1 (MQ=255)
tGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGa > 1:724857/1‑264 (MQ=255)
tGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCTTACTCGTTGa < 1:700515/284‑1 (MQ=255)
tGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCTTACTCGTTGa < 1:1396727/284‑1 (MQ=255)
ggCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGGTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTGCACTGGCCGGGCCTTGGACGCTTTCttggttgatccc > 2:2066686/1‑277 (MQ=255)
tcgacctgttACCCTCCCTGACGCCCGGGGCGGCAGTGGCCGCCGTGATGGCGCGCTTGACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCTTACTCGTTGACTCCGTAGaaa < 2:763858/280‑1 (MQ=255)
aCTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGACGGGACTTGGACGCTTACTCGTTGACTCCGTAGAAAt > 1:174377/1‑289 (MQ=255)
cATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCTTACTCGTTGACTCCGTAGAAATGCGt > 1:124068/1‑289 (MQ=255)
ttttACCCTCCCTGACGGTCGGCGGGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCTTACTCGTTGACTCCGTAGAAATGCGTGa < 1:867906/289‑1 (MQ=255)
tACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCTTACTCGTTGa > 2:1751591/1‑268 (MQ=255)
cctccctGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAAATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCTTACTCGTTGACTCCGTAGAAAGGCGTGATTAccc < 1:494875/289‑1 (MQ=255)
ggCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCTTACTCGTTGACTCCGTAGAAATGCGTGATTACCCGGTGATTCAGGCgg > 1:557782/1‑289 (MQ=255)
ggCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCTTACTCGTTGACTCCGTAGAAATGCGTGATTACCCGGTGATTCAGGCgg > 1:1358059/1‑289 (MQ=255)
aTGGCGCGCTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTCCAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGTCTGTACTTGGCGGCTTACTTGTTGACTTCGTAGACATGCGTTATTACCGGTTGATTTAGGCGGCAATTCTGCTTTTctcgctgc > 2:1077458/1‑282 (MQ=255)
cgcTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCt > 2:1353711/1‑161 (MQ=255)
gcTTTACCCGCGC‑G‑TCGTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCTTACTCGTTGACTCCGTAGAAATGCGTGATTACCCGGTGATTCAGGCGGAAATTCTGCTTTTCTCGCTGGAATTTa < 1:289646/288‑1 (MQ=255)
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GACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGAGCGGGATCAGCTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGC‑G‑AGCTTTGTCGA‑TGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAA‑GGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCTTACTCGTTGACTCCGTAGAAATGCGTGATTACCCGGTGATTCAGGCGGAAATTCTGCTTTTCAGCCTGGAATTTATTCTT > CP042583/734163‑734721
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
