Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 774,751 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583774,7510GC99.6% 629.2 / NA 267intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (121/145);  minor base T (1/0);  total (122/145)
Fisher's exact test for biased strand distribution p-value = 4.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01
*CP042583774,7520CG99.6% 624.6 / NA 267intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (121/145);  total (122/145)
Fisher's exact test for biased strand distribution p-value = 4.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583774,7530TA100.0% 631.0 / NA 267intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (122/145);  total (122/145)

Only 100 of 267 total aligned reads displayed.

CAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGCGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATGCTCATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCGCTAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCACTGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGATATGGGTAGTAATCGTGGCAAATCAGGGAAATCGTCCACACATCCGGCGTTTCTTGCGTAATGTGATGAACCTGCATCCGCCACGGGCATTGAT  >  CP042583/774471‑775028
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                    
cAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGCGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCa                                                                                                                                                                                                                                                                                <  1:1244990/289‑1 (MQ=255)
   gTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGCGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCagag                                                                                                                                                                                                                                                                             >  1:1435742/1‑289 (MQ=255)
      cacCTGCCAGCAGTTCGCGAGTGAGACGACCAGCGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATa                                                                                                                                                                                                                                                                          >  1:1037429/1‑289 (MQ=255)
        ccTGCCAGCAGTTCGCGAGTGAGACGACCAGCGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAAt                                                                                                                                                                                                                                                                        <  2:334611/289‑1 (MQ=255)
           gCCAGCAGTTCGCGAGTGAGACGACCAGCGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCa                                                                                                                                                                                                                                                                      >  2:1343616/1‑288 (MQ=255)
             cagcagTTCGCGAGTGAGACGACCAGCGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCAcc                                                                                                                                                                                                                                                                    <  1:1704257/288‑1 (MQ=255)
             cagcagTTCGCCAGTGAGACGACCAGCGTTAAAGCCTTCGGTACCGTTATTTTCTGCCCCCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCCCATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCAcc                                                                                                                                                                                                                                                                    <  2:495224/288‑1 (MQ=255)
             cagcagTTCGCAGGTGAGACGACCAGCGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCAcc                                                                                                                                                                                                                                                                    <  2:571142/288‑1 (MQ=255)
             cagaagTTTCCGCGTGAGACGACCGGCGATAAAGCCGTCGGTAACGTTATTTTCTGCCACCCGCGTTACCGGAAAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACGCGCACATCGGCCTGTGGGCGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCAcc                                                                                                                                                                                                                                                                    <  2:1928851/288‑1 (MQ=255)
                     cgcgAGTGAGACGACCAGCGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCCTCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCACCGCCTCCGACAGCTAGAGATCATCTCCGCGgttttc                                                                                                                                                                                                                                                           >  2:1553549/1‑287 (MQ=255)
                     cgcgAGTGAGACGACCAGCGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTAc                                                                                                                                                                                                                                                           >  1:1690117/1‑289 (MQ=255)
                             ggacgacCATCGATAAAGCCTTCGGTAACGTTGTTTTCTGCCAACAGCTTTACCAGATAGTTACGC‑CACTCGTCGGCGAAAATAACATCCGGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATcgcgc                                                                                                                                                                                                                                                    <  2:905290/287‑1 (MQ=255)
                               acgacCAGCGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGt                                                                                                                                                                                                                                                  <  1:1144960/288‑1 (MQ=255)
                                         aTAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGCGATAATCAACGCGTTTTAACTCGCCGGTCCGCCACCggg                                                                                                                                                                                                                                       >  2:1584289/1‑289 (MQ=255)
                                               ccTTCGGTAACGTTATTTTCTGCCACCGGGGTTCCCGGATAGTTAGGC‑CACTCATCGGCGAAAATACCATCCTGCGGCGTACGCACGTTGTAA‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGa                                                                                                                                                                                                                                 <  2:1079233/289‑1 (MQ=255)
                                                 ttCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGac                                                                                                                                                                                                                                >  1:2222842/1‑288 (MQ=255)
                                                         cGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGac                                                                                                                                                                                                                                <  1:1929217/280‑1 (MQ=255)
                                                         cGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGtcatc                                                                                                                                                                                                                       >  1:31010/1‑289 (MQ=255)
                                                         cGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGGCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACAGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGtcagc                                                                                                                                                                                                                       >  1:1580732/1‑287 (MQ=255)
                                                         cGTTATTTCCTGCCACCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGtcatc                                                                                                                                                                                                                       >  1:551079/1‑289 (MQ=255)
                                                                     ccccccgCGTTACCGGCTAGTTACGC‑CACTCATCGGCGAAAACAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCa                                                                                                                                                                                                            <  2:1188240/282‑1 (MQ=255)
                                                                            cGTTACCGGATAG‑TACACGCAATTACCGGCGAAATAACCATCATGCGGCGTCCGCA‑GGTATAGTAGAACCCGAACATCGGCCTTTGGACGGTTCTTCGAAAGCCAGCGACGCATCGACATAATCGTCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGTGCCGACACCGTCATCAATCCGCCGCACGGTCAgg                                                                                                                                                                                                    <  2:1139450/289‑1 (MQ=255)
                                                                             gTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCa                                                                                                                                                                                                      <  1:236715/286‑1 (MQ=255)
                                                                             gTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAgg                                                                                                                                                                                                    <  1:199776/288‑1 (MQ=255)
                                                                             cttACCGGATAGTTAAGC‑GATTCCTCGGCGAAAATAACATCCTGCGGCGTACGACCGTTGTAG‑ATCACCCGCCCATCGGCCTGTGGACGGTGCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTTACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCGTCTTCTGTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAgg                                                                                                                                                                                                    <  2:342562/287‑1 (MQ=255)
                                                                               tACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTg                                                                                                                                                                                                 <  1:345574/289‑1 (MQ=255)
                                                                                           gagtcaacacATCGGCGAACATACCATCCGGCGGCGTACGCCCGTTGTAG‑ATCACCCGAACCTGGGCCGGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATtcact                                                                                                                                                                                      <  2:81272/280‑1 (MQ=255)
                                                                                           aCGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCCGCCACTGGGAGCCGACCCCGTCATCAATCCGCCCCACGGTCAGGGTGATATATtaacc                                                                                                                                                                                      >  2:2111165/1‑287 (MQ=255)
                                                                                           aCGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACAACGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCCCCGCCCGGCCAGGGTGATATATtcacc                                                                                                                                                                                      >  2:314481/1‑287 (MQ=255)
                                                                                                  cTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGacac                                                                                                                                                                                                                              <  1:755923/242‑1 (MQ=255)
                                                                                                  cTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGacac                                                                                                                                                                                                                              >  2:755923/1‑242 (MQ=255)
                                                                                                       cGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAgg                                                                                                                                                                                                    <  2:26617/263‑1 (MQ=255)
                                                                                                       cGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAgg                                                                                                                                                                                                    >  1:26617/1‑263 (MQ=255)
                                                                                                           gAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTgga                                                                                                                                                                       <  1:1709706/288‑1 (MQ=255)
                                                                                                               aTAACATCCTGCGGCTTACGCAGATTGTAG‑ATCCCCCGCACCTCGGCCTGTGGCCGGTTATTCGCACTCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGGCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCAACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCATGCCTGGCGTGGGGGaaa                                                                                                                                                                  <  1:721023/289‑1 (MQ=255)
                                                                                                               aTAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGaaa                                                                                                                                                                  <  1:1534668/289‑1 (MQ=255)
                                                                                                                    aacccgcggctTACGCACGTGGAGG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGgtg                                                                                                                                                             <  2:1518129/284‑1 (MQ=255)
                                                                                                                    aTCCTGCGGCTTACGCACGTGGTAG‑ACCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGgtg                                                                                                                                                             <  2:1416873/289‑1 (MQ=255)
                                                                                                                        tGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTaa                                                                                                                                                          >  1:90069/1‑288 (MQ=255)
                                                                                                                          cggcgTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGc                                                                                                                                                        >  1:97605/1‑288 (MQ=255)
                                                                                                                             cgTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGat                                                                                                                                                                                               <  1:1464155/246‑1 (MQ=255)
                                                                                                                              gTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCGGGGTGATATATTCACTCACGCCTGGCGTGGAGGCAATGGTGTAAGccacca                                                                                                                                                   >  2:618978/1‑284 (MQ=255)
                                                                                                                               tagacctattctAG‑ACCAACCGCACGTCGCCCTGTGGGCGGTTATTAGCAAGCCAGCGACGCATCGGCATAATCGGCGTGCCGCCGCGGCCTGCCGCCAGCCACAGGAATTTATCTTCTGCTTCAGCGGCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGGGCCGACACCTTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAg                                                                                                                                                  <  2:836200/278‑1 (MQ=255)
                                                                                                                               tACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCa                                                                                                                                                   >  1:816938/1‑288 (MQ=255)
                                                                                                                                 cGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGGTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCCATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGCGGGAAGGGGGCAAGCACGCAGCg                                                                                                                                                >  2:1471271/1‑289 (MQ=255)
                                                                                                                                           aG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATtcact                                                                                                                                                                                      >  2:1857793/1‑241 (MQ=255)
                                                                                                                                               tCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGctgagtt                                                                                                                                   >  1:1756348/1‑283 (MQ=255)
                                                                                                                                                 ccccGCCCCTCGGCCGGTGGAGGGTTCCTCGAAAGCCAGCGACGCATCGACATAATCGGCGTGACGCGGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGctgagtttc                                                                                                                                 <  2:1683756/288‑9 (MQ=255)
                                                                                                                                                 aCCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCCTCAATCCGCCGCACGGTCAGGGCGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCAAGCAGCGTTTCCGctgagtttc                                                                                                                                 >  1:615068/1‑281 (MQ=255)
                                                                                                                                                 aCCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATtcact                                                                                                                                                                                      >  1:1595159/1‑236 (MQ=255)
                                                                                                                                                 aCCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGctgagtttc                                                                                                                                 <  1:1073944/289‑9 (MQ=255)
                                                                                                                                                   ccGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGtcatca                                                                                                                                                                                                                      <  1:430216/202‑1 (MQ=255)
                                                                                                                                                   ccGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCCATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCg                                                                                                                                >  2:1445011/1‑288 (MQ=255)
                                                                                                                                                   ccGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCa                                                                                                                                                                                                            >  2:414471/1‑212 (MQ=255)
                                                                                                                                                   ccGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGaaa                                                                                                                                                                  <  1:1307616/254‑1 (MQ=255)
                                                                                                                                                   ccGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGc                                                                                                                               >  1:517201/1‑289 (MQ=255)
                                                                                                                                                     gCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCa                                                                                                                                                                                                            <  1:633332/210‑1 (MQ=255)
                                                                                                                                                     gCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGaaa                                                                                                                                                                  <  1:1320439/252‑1 (MQ=255)
                                                                                                                                                     gCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCAc                                                                                                                             >  1:1375115/1‑289 (MQ=255)
                                                                                                                                                      cacaTCGGCCGTGGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACg                                                                                                                            <  2:698867/289‑1 (MQ=255)
                                                                                                                                                          tCGGCCTGTGGACGCTACTTCGCAAGCCAGCGACGCATCGACAAAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGa                                                                                                                        <  2:946253/289‑1 (MQ=255)
                                                                                                                                                           gggCCGGGGGACGGGTCTGCGCAAGCAAGCGACGGATCGACATAAGCGGCGTGACGCCGCACCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCGCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGa                                                                                                                        <  2:1523773/287‑1 (MQ=255)
                                                                                                                                                            ggCCTGTGGACGGTTCTTCGCTAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGAcc                                                                                                                      <  2:1082467/289‑1 (MQ=255)
                                                                                                                                                            ggCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGAcc                                                                                                                      <  1:2111165/289‑1 (MQ=255)
                                                                                                                                                               cTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAg                                                                                                                    <  2:97605/288‑1 (MQ=255)
                                                                                                                                                               cTGTGGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGt                                                                                                                   <  1:1986168/289‑1 (MQ=255)
                                                                                                                                                                tgtgGACCGTTCTGCGCAAGCCAGCGACGCATAGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCAGCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGt                                                                                                                   <  2:2034524/288‑1 (MQ=255)
                                                                                                                                                                 gtgGACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGc                                                                                                                 >  1:1872045/1‑289 (MQ=255)
                                                                                                                                                                   ggACGGTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGac                                                                                                                                                                                                                                >  2:1764157/1‑176 (MQ=255)
                                                                                                                                                                       ggTTCTTCGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATAtt                                                                                                                                                                                          >  1:332624/1‑210 (MQ=255)
                                                                                                                                                                         ttcttcGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGcc                                                                                                        <  2:218587/289‑1 (MQ=255)
                                                                                                                                                                            ttcGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGt                                                                                                                                                                                                                           >  2:1703528/1‑172 (MQ=255)
                                                                                                                                                                            ttcGCAAGCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGCCCg                                                                                                      >  1:1818142/1‑288 (MQ=255)
                                                                                                                                                                              cGCAAGCCAGCGACGCATCGACATAATCGGCGTTACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGAGAATCACCGCGTTTTACAACGCACGTCAGCCACTGTGAGCCGACACCGCCATCAATCCGCCGTACGGCCAGGGTTAGAGATTAACCCACGTCTGGCGCGGAGGAAAGGGTGTAAGTACGCAGGCTCTCTGCTCAGTTTCCATCGCTGTCCGGTGTATA‑TGTCCCGgc                                                                                                    >  2:680423/1‑288 (MQ=255)
                                                                                                                                                                                  aGCCGGCGACCCATGGACATGTTCGGCGGGACGCCGCAGGCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCCGGTAAATTCCCCCATCGCGTCCGAAAGCCAGCGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGat                                                                                               <  2:10057/289‑1 (MQ=255)
                                                                                                                                                                                   gCCAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGt                                                                                                                                                                                                        >  2:1993297/1‑184 (MQ=255)
                                                                                                                                                                                     cAGCGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGatat                                                                                             <  1:1411193/288‑1 (MQ=255)
                                                                                                                                                                                        cGACGCATCGACATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATtcactca                                                                                                                                                                                    >  2:1268242/1‑199 (MQ=255)
                                                                                                                                                                                                             gTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGt                                                                                                                                                                                                        <  2:782536/158‑1 (MQ=255)
                                                                                                                                                                                                             gTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGATATGGGTAGTAATCGTGGCAAATCAggg                                                                    <  1:1170052/289‑1 (MQ=255)
                                                                                                                                                                                                               gcccccgcAGCCTGCCGCAAGCAAAAGGAATTTATCTGCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCTCGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGATATGGGTAGTAATCGTGGCAAATCAGGGaa                                                                  <  2:249212/285‑1 (MQ=255)
                                                                                                                                                                                                                aCGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGATATGGGTAGTAATCGTGGCAAATCAGGGaa                                                                  <  1:2168568/288‑1 (MQ=255)
                                                                                                                                                                                                                     gcATCCTGCCGCCAGAAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCCCCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATACGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGATATGGGTAGTAATCGTGGCAAATCAGGGAAATCGTc                                                            <  1:680423/289‑1 (MQ=255)
                                                                                                                                                                                                                      cAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGATATGGGTAGTAATCGTGGCAAATCAGGGAAATCGTcc                                                           >  1:858063/1‑289 (MQ=255)
                                                                                                                                                                                                                            gccgccAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGGGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCCGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCCTA‑TGTCCCGGCGCGTTCTGGGTAGTAATCGTGGCAAAACCGGGCAATAGTCcacaca                                                      >  2:352894/1‑288 (MQ=255)
                                                                                                                                                                                                                             ccgccAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGCGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGCCCAGTGCATA‑TTGCCCGGCCCGATATGGGTAGTAATCGTGGCAAATCAGTGAAATCGTCCACACAt                                                     >  2:1807434/1‑288 (MQ=255)
                                                                                                                                                                                                                                 cAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGATATGGGTAGTAATCGTGGCAAATCAGGGAAATCGTCCACACATCCGGc                                                <  1:1420574/289‑1 (MQ=255)
                                                                                                                                                                                                                                        aGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGATATGGGTAGTAATCGTGGCAAATCAGGGAAATCGTCCACACATCCGGCGTTTCtt                                         >  1:77725/1‑289 (MQ=255)
                                                                                                                                                                                                                                              ttttctcttGCTTGATCGTCGCAGGTAAATTCCCCCACCGCGTCCGAAAGCCAGGGATAAGCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGATATGGGTAGTAATCGTGGCAAATCAGGGAAATCGTCCACACATCCGGCGTTTCTTGCGTaa                                   <  2:1450120/281‑1 (MQ=255)
                                                                                                                                                                                                                                              ttATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGATATGGGTAGTAATCGTGGCAAATCAGGGAAATCGTCCACACATCCGGCGTTTCTTGCGTaa                                   <  1:1504773/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  cttctGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGATATGGGTAGTAATCGTGGCAAATCAGGGAAATCGTCCACACATCCGGCGTTTCTTGCGTAAtgtg                               <  1:943773/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     ctGCTTTATCGTCGCTGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGcc                                                                                                                                                                                >  2:131923/1‑142 (MQ=255)
                                                                                                                                                                                                                                                     ctGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCCTCAATCCGCCGCACGGTCAGGGTGATATATTCACTCGCGCCTGGCGTGGAGGAAATGGTGTAAGAACGCGGCGTTTCCGCTGAGTTTCGGCCGCTGACCAGTGCATA‑TTGCACGGCGCGGTATggg                                                                                          >  2:1200671/1‑227 (MQ=255)
                                                                                                                                                                                                                                                     ctGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGATATGGGTAGTAATCGTGGCAAATCAGGGAAATCGTCCACACATCCGGCGTTTCTTGCGTAATGtgatg                            >  1:1111278/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              cgtcgCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGATATGGGTAGTAATCGTGGCAAATCAGGGAAATCGTCCACACATCCGGCGTTTCTTGCGTAATGTGATGAACCTGCAt                   <  1:396434/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  gCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTCAGCACGCAGCGTTTCCGCTGAGCTTCGCCCGCTGACCAGTGCTTA‑TTGCCCGGCGCGATCTGGGTAGTTATCGTGGCAAGTCAGGGAAATCGTCACCACCTCCTGCGTTGCTTGCGTACTTGGATGAACCTGCATCCg                >  2:1542741/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                  gCAGGTAAATTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGATATGGGTAGTAATCGTGGCAAATCAGGGAAATCGTCCACACATCCGGCGTTTCTTGCGTAATGTGATGAACCTGCATCCg                >  2:523442/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                          aTTCCCCCATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGATATGGGTAGTAATCGTGGCAAATCAGGGAAATCGTCCACACATCCGGCGTTTCTTGCGTAATGTGATGAACCTGCATCCGCCACGGGCa       <  2:858063/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                              ccccATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATATTTGCCCGGCGCGATATGGGTAGTAATCGTGGCAAATCAGGGAAATCGTCCACACATCCGGCGCTTCTTGCGTAATGTGATGAACCTGCATCCGCCACGGGCATTg    <  2:639271/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                ccATCGCGTCCGAAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCTGAGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGATATGGGTAGTAATCGTGGCAAATCAGGGAAATCGTCCACACATCCGGCGTTTCTTGCGTAATGTGATGAACCTGCATCCGCCACGGGCATTGAt  >  1:1785686/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                    
CAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGCGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC‑CACTCATCGGCGAAAATAACATCCTGCGGCGTACGCACGTTGTAG‑ATCACCCGCACATCGGCCTGTGGACGGTTCTTCGCAAGCCAGCGACGCATGCTCATAATCGGCGTGACGCCGCAGCCTGCCGCCAGCAACAGGAATTTATCTTCTGCTTTATCGTCGCAGGTAAATTCCCCCATCGCGTCGCTAAGCCAGAGATAATCACCGCGTTTTACATCGCGCGTCAGCCACTGGGAGCCGACACCGTCATCAATCCGCCGCACGGTCAGGGTGATATATTCACTCACGCCTGGCGTGGAGGAAATGGTGTAAGCACGCAGCGTTTCCGCACTGTTTCGCACGCTGACCAGTGCATA‑TTGCCCGGCGCGATATGGGTAGTAATCGTGGCAAATCAGGGAAATCGTCCACACATCCGGCGTTTCTTGCGTAATGTGATGAACCTGCATCCGCCACGGGCATTGAT  >  CP042583/774471‑775028

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A